RNA–Protein interactions for RNA: ENST00000564664.5

GTF3C1-204, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-204ENST00000564664 ZCCHC2Q9C0B9 1178 aaKnown RBP12.01□□□□□ -0.49
GTF3C1-204ENST00000564664 STARD5Q9NSY2 213 aa12.01□□□□□ -0.49
GTF3C1-204ENST00000564664 POT1Q9NUX5 634 aa12.01□□□□□ -0.49
GTF3C1-204ENST00000564664 TMEM9Q9P0T7 183 aa12.01□□□□□ -0.49
GTF3C1-204ENST00000564664 PILRAQ9UKJ1 303 aa12.01□□□□□ -0.49
GTF3C1-204ENST00000564664 SPTA1P02549 2419 aa12.01□□□□□ -0.49
GTF3C1-204ENST00000564664 FLNBO75369 2602 aaKnown RBP12□□□□□ -0.49
GTF3C1-204ENST00000564664 KLHL33A6NCF5 533 aa12□□□□□ -0.49
GTF3C1-204ENST00000564664 PRR19A6NJB7 356 aa12□□□□□ -0.49
GTF3C1-204ENST00000564664 POLR1CO15160 346 aaPredicted RBP12□□□□□ -0.49
GTF3C1-204ENST00000564664 RAD1O60671 282 aa12□□□□□ -0.49
GTF3C1-204ENST00000564664 PMPCBO75439 489 aa12□□□□□ -0.49
GTF3C1-204ENST00000564664 ZNF189O75820 626 aaPredicted RBP12□□□□□ -0.49
GTF3C1-204ENST00000564664 UBXN7O94888 489 aa12□□□□□ -0.49
GTF3C1-204ENST00000564664 C9P02748 559 aa12□□□□□ -0.49
GTF3C1-204ENST00000564664 PIRTP0C851 137 aa12□□□□□ -0.49
GTF3C1-204ENST00000564664 TNNT1P13805 278 aa12□□□□□ -0.49
GTF3C1-204ENST00000564664 AMD1P17707 334 aa12□□□□□ -0.49
GTF3C1-204ENST00000564664 HLA-DPA1P20036 260 aa12□□□□□ -0.49
GTF3C1-204ENST00000564664 WNT3AP56704 352 aa12□□□□□ -0.49
GTF3C1-204ENST00000564664 COPS2P61201 443 aa12□□□□□ -0.49
GTF3C1-204ENST00000564664 ABHD18Q0P651 414 aa12□□□□□ -0.49
GTF3C1-204ENST00000564664 WASHC5Q12768 1159 aa12□□□□□ -0.49
GTF3C1-204ENST00000564664 TMEM115Q12893 351 aaPredicted RBP12□□□□□ -0.49
GTF3C1-204ENST00000564664 MPP3Q13368 585 aa12□□□□□ -0.49
GTF3C1-204ENST00000564664 GTF2H3Q13889 308 aa12□□□□□ -0.49
GTF3C1-204ENST00000564664 SPA17Q15506 151 aa12□□□□□ -0.49
GTF3C1-204ENST00000564664 INSCQ1MX18 579 aa12□□□□□ -0.49
GTF3C1-204ENST00000564664 CRTC2Q53ET0 693 aaPredicted RBP12□□□□□ -0.49
GTF3C1-204ENST00000564664 SNAP47Q5SQN1 464 aa12□□□□□ -0.49
GTF3C1-204ENST00000564664 CYB5D1Q6P9G0 228 aa12□□□□□ -0.49
GTF3C1-204ENST00000564664 SARM1Q6SZW1 724 aa12□□□□□ -0.49
GTF3C1-204ENST00000564664 KDELC1Q6UW63 502 aa12□□□□□ -0.49
GTF3C1-204ENST00000564664 PID1Q7Z2X4 250 aa12□□□□□ -0.49
GTF3C1-204ENST00000564664 ZNF761Q86XN6 746 aaPredicted RBP12□□□□□ -0.49
GTF3C1-204ENST00000564664 TRIM48Q8IWZ4 208 aa12□□□□□ -0.49
GTF3C1-204ENST00000564664 NLGN4XQ8N0W4 816 aa12□□□□□ -0.49
GTF3C1-204ENST00000564664 NLGN4YQ8NFZ3 816 aaPredicted RBP12□□□□□ -0.49
GTF3C1-204ENST00000564664 KIAA1143Q96AT1 154 aaPredicted RBP12□□□□□ -0.49
GTF3C1-204ENST00000564664 ZNF514Q96K75 400 aaPredicted RBP12□□□□□ -0.49
GTF3C1-204ENST00000564664 C9orf72Q96LT7 481 aa12□□□□□ -0.49
GTF3C1-204ENST00000564664 RAB33BQ9H082 229 aa12□□□□□ -0.49
GTF3C1-204ENST00000564664 OSGEPL1Q9H4B0 414 aa12□□□□□ -0.49
GTF3C1-204ENST00000564664 GEMIN8Q9NWZ8 242 aaKnown RBP12□□□□□ -0.49
GTF3C1-204ENST00000564664 EPHA6Q9UF33 1036 aa12□□□□□ -0.49
GTF3C1-204ENST00000564664 SLC23A2Q9UGH3 650 aa12□□□□□ -0.49
GTF3C1-204ENST00000564664 EFR3BQ9Y2G0 817 aa12□□□□□ -0.49
GTF3C1-204ENST00000564664 TMEM184BQ9Y519 407 aaPredicted RBP12□□□□□ -0.49
GTF3C1-204ENST00000564664 HEMK1Q9Y5R4 338 aaPredicted RBP12□□□□□ -0.49
GTF3C1-204ENST00000564664 SDK2Q58EX2 2172 aa12□□□□□ -0.49
GTF3C1-204ENST00000564664 MN1Q10571 1320 aaPredicted RBP12□□□□□ -0.49
GTF3C1-204ENST00000564664 ZNF891A8MT65 544 aaPredicted RBP11.99□□□□□ -0.49
GTF3C1-204ENST00000564664 A8MU76 341 aa11.99□□□□□ -0.49
GTF3C1-204ENST00000564664 ITGB6P18564 788 aa11.99□□□□□ -0.49
GTF3C1-204ENST00000564664 CD68P34810 354 aaPredicted RBP11.99□□□□□ -0.49
GTF3C1-204ENST00000564664 SLC19A1P41440 591 aa11.99□□□□□ -0.49
GTF3C1-204ENST00000564664 MC1RQ01726 317 aa11.99□□□□□ -0.49
GTF3C1-204ENST00000564664 SRSF6Q13247 344 aaKnown RBP11.99□□□□□ -0.49
GTF3C1-204ENST00000564664 ITGA9Q13797 1035 aa11.99□□□□□ -0.49
GTF3C1-204ENST00000564664 IL11RAQ14626 422 aa11.99□□□□□ -0.49
GTF3C1-204ENST00000564664 SLC1A5Q15758 541 aa11.99□□□□□ -0.49
GTF3C1-204ENST00000564664 PPP2R5EQ16537 467 aa11.99□□□□□ -0.49
GTF3C1-204ENST00000564664 SIRPB2Q5JXA9 342 aa11.99□□□□□ -0.49
GTF3C1-204ENST00000564664 LDLRAP1Q5SW96 308 aa11.99□□□□□ -0.49
GTF3C1-204ENST00000564664 ZNF648Q5T619 568 aaPredicted RBP11.99□□□□□ -0.49
GTF3C1-204ENST00000564664 KAZNQ674X7 775 aa11.99□□□□□ -0.49
GTF3C1-204ENST00000564664 ANKS6Q68DC2 871 aa11.99□□□□□ -0.49
GTF3C1-204ENST00000564664 C11orf63Q6NUN7 778 aa11.99□□□□□ -0.49
GTF3C1-204ENST00000564664 BORAQ6PGQ7 559 aa11.99□□□□□ -0.49
GTF3C1-204ENST00000564664 ZNF547Q8IVP9 402 aa11.99□□□□□ -0.49
GTF3C1-204ENST00000564664 BEND7Q8N7W2 519 aaPredicted RBP11.99□□□□□ -0.49
GTF3C1-204ENST00000564664 HTR3CQ8WXA8 447 aa11.99□□□□□ -0.49
GTF3C1-204ENST00000564664 ZDHHC12Q96GR4 267 aa11.99□□□□□ -0.49
GTF3C1-204ENST00000564664 SLC45A3Q96JT2 553 aa11.99□□□□□ -0.49
GTF3C1-204ENST00000564664 TBC1D10AQ9BXI6 508 aa11.99□□□□□ -0.49
GTF3C1-204ENST00000564664 SLC40A1Q9NP59 571 aa11.99□□□□□ -0.49
GTF3C1-204ENST00000564664 IL26Q9NPH9 171 aa11.99□□□□□ -0.49
GTF3C1-204ENST00000564664 IL17CQ9P0M4 197 aa11.99□□□□□ -0.49
GTF3C1-204ENST00000564664 KLHL8Q9P2G9 620 aaPredicted RBP11.99□□□□□ -0.49
GTF3C1-204ENST00000564664 ZNF624Q9P2J8 865 aaPredicted RBP11.99□□□□□ -0.49
GTF3C1-204ENST00000564664 SAE1Q9UBE0 346 aaPredicted RBP11.99□□□□□ -0.49
GTF3C1-204ENST00000564664 TUBD1Q9UJT1 453 aa11.99□□□□□ -0.49
GTF3C1-204ENST00000564664 PKP3Q9Y446 797 aa11.99□□□□□ -0.49
GTF3C1-204ENST00000564664 PCDHA13Q9Y5I0 950 aa11.99□□□□□ -0.49
GTF3C1-204ENST00000564664 hCG_1818297A0A087WSY0 165 aa11.98□□□□□ -0.49
GTF3C1-204ENST00000564664 PDZK1P1A8MUH7 402 aa11.98□□□□□ -0.49
GTF3C1-204ENST00000564664 AURKAO14965 403 aa11.98□□□□□ -0.49
GTF3C1-204ENST00000564664 ANXA9O76027 345 aa11.98□□□□□ -0.49
GTF3C1-204ENST00000564664 LIFP15018 202 aa11.98□□□□□ -0.49
GTF3C1-204ENST00000564664 PECAM1P16284 738 aaPredicted RBP11.98□□□□□ -0.49
GTF3C1-204ENST00000564664 WT1P19544 449 aaPredicted RBP11.98□□□□□ -0.49
GTF3C1-204ENST00000564664 NFKB1P19838 968 aa11.98□□□□□ -0.49
GTF3C1-204ENST00000564664 CYLC1P35663 651 aaPredicted RBP11.98□□□□□ -0.49
GTF3C1-204ENST00000564664 SPAM1P38567 509 aa11.98□□□□□ -0.49
GTF3C1-204ENST00000564664 HALP42357 657 aa11.98□□□□□ -0.49
GTF3C1-204ENST00000564664 MAPK9P45984 424 aa11.98□□□□□ -0.49
GTF3C1-204ENST00000564664 DMPKQ09013 629 aa11.98□□□□□ -0.49
GTF3C1-204ENST00000564664 NFATC3Q12968 1075 aa11.98□□□□□ -0.49
GTF3C1-204ENST00000564664 ATP13A5Q4VNC0 1218 aa11.98□□□□□ -0.49
GTF3C1-204ENST00000564664 KLHL35Q6PF15 583 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms