RNA–Protein interactions for RNA: ENST00000564593.1

LINC00560-201, long intergenic non-protein coding RNA 560, humanhuman

TSL 1 (best) BASIC

Gene LINC00560, Length 1,599 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00560-201ENST00000564593 HAUS6Q7Z4H7 955 aa4.61□□□□□ -1.67
LINC00560-201ENST00000564593 LDB1Q86U70 411 aaPredicted RBP4.61□□□□□ -1.67
LINC00560-201ENST00000564593 ADHFE1Q8IWW8 467 aa4.61□□□□□ -1.67
LINC00560-201ENST00000564593 SLC38A9Q8NBW4 561 aa4.61□□□□□ -1.67
LINC00560-201ENST00000564593 OR5R1Q8NH85 324 aa4.61□□□□□ -1.67
LINC00560-201ENST00000564593 THAP6Q8TBB0 222 aa4.61□□□□□ -1.67
LINC00560-201ENST00000564593 DUSP19Q8WTR2 217 aa4.61□□□□□ -1.67
LINC00560-201ENST00000564593 LPGAT1Q92604 370 aa4.61□□□□□ -1.67
LINC00560-201ENST00000564593 TANKQ92844 425 aa4.61□□□□□ -1.67
LINC00560-201ENST00000564593 QRFPRQ96P65 431 aa4.61□□□□□ -1.67
LINC00560-201ENST00000564593 PCYT2Q99447 389 aa4.61□□□□□ -1.67
LINC00560-201ENST00000564593 GFI1Q99684 422 aa4.61□□□□□ -1.67
LINC00560-201ENST00000564593 HGH1Q9BTY7 390 aa4.61□□□□□ -1.67
LINC00560-201ENST00000564593 AP1M1Q9BXS5 423 aa4.61□□□□□ -1.67
LINC00560-201ENST00000564593 SLCO5A1Q9H2Y9 848 aa4.61□□□□□ -1.67
LINC00560-201ENST00000564593 RABEP2Q9H5N1 569 aa4.61□□□□□ -1.67
LINC00560-201ENST00000564593 DENND2DQ9H6A0 471 aaPredicted RBP4.61□□□□□ -1.67
LINC00560-201ENST00000564593 CHMP1AQ9HD42 196 aaPredicted RBP4.61□□□□□ -1.67
LINC00560-201ENST00000564593 CCDC177Q9NQR7 707 aaPredicted RBP4.61□□□□□ -1.67
LINC00560-201ENST00000564593 LARSQ9P2J5 1176 aaKnown RBP4.61□□□□□ -1.67
LINC00560-201ENST00000564593 AMACRQ9UHK6 382 aa4.61□□□□□ -1.67
LINC00560-201ENST00000564593 TMEM184BQ9Y519 407 aaPredicted RBP4.61□□□□□ -1.67
LINC00560-201ENST00000564593 MAGEB17A8MXT2 336 aa4.6□□□□□ -1.67
LINC00560-201ENST00000564593 H0YIN7 160 aa4.6□□□□□ -1.67
LINC00560-201ENST00000564593 TMEM189-UBE2V1I3L0A0 370 aa4.6□□□□□ -1.67
LINC00560-201ENST00000564593 J3QR06 171 aa4.6□□□□□ -1.67
LINC00560-201ENST00000564593 KDM4BO94953 1096 aa4.6□□□□□ -1.67
LINC00560-201ENST00000564593 ACAA1P09110 424 aaPredicted RBP4.6□□□□□ -1.67
LINC00560-201ENST00000564593 VPREB1P12018 145 aa4.6□□□□□ -1.67
LINC00560-201ENST00000564593 GJA1P17302 382 aa4.6□□□□□ -1.67
LINC00560-201ENST00000564593 CORO1AP31146 461 aaKnown RBP4.6□□□□□ -1.67
LINC00560-201ENST00000564593 ZNF155Q12901 538 aaPredicted RBP4.6□□□□□ -1.67
LINC00560-201ENST00000564593 UBE2V1Q13404 147 aa4.6□□□□□ -1.67
LINC00560-201ENST00000564593 NFATC4Q14934 902 aa4.6□□□□□ -1.67
LINC00560-201ENST00000564593 KYNUQ16719 465 aa4.6□□□□□ -1.67
LINC00560-201ENST00000564593 SETMARQ53H47 684 aaPredicted RBP4.6□□□□□ -1.67
LINC00560-201ENST00000564593 KRTCAP3Q53RY4 240 aa4.6□□□□□ -1.67
LINC00560-201ENST00000564593 FAM133BQ5BKY9 247 aaKnown RBP4.6□□□□□ -1.67
LINC00560-201ENST00000564593 C9orf47Q6ZRZ4 202 aa4.6□□□□□ -1.67
LINC00560-201ENST00000564593 DENND5BQ6ZUT9 1274 aa4.6□□□□□ -1.67
LINC00560-201ENST00000564593 B4GALNT2Q8NHY0 566 aa4.6□□□□□ -1.67
LINC00560-201ENST00000564593 SLC44A1Q8WWI5 657 aa4.6□□□□□ -1.67
LINC00560-201ENST00000564593 PHF21BQ96EK2 531 aa4.6□□□□□ -1.67
LINC00560-201ENST00000564593 PGAP3Q96FM1 320 aaPredicted RBP4.6□□□□□ -1.67
LINC00560-201ENST00000564593 OR10A4Q9H209 315 aa4.6□□□□□ -1.67
LINC00560-201ENST00000564593 PPIL3Q9H2H8 161 aaKnown RBP4.6□□□□□ -1.67
LINC00560-201ENST00000564593 GDE1Q9NZC3 331 aa4.6□□□□□ -1.67
LINC00560-201ENST00000564593 SMARCAL1Q9NZC9 954 aa4.6□□□□□ -1.67
LINC00560-201ENST00000564593 BCCIPQ9P287 314 aaKnown RBP eCLIP4.6□□□□□ -1.67
LINC00560-201ENST00000564593 WNT16Q9UBV4 365 aa4.6□□□□□ -1.67
LINC00560-201ENST00000564593 GIMAP2Q9UG22 337 aa4.6□□□□□ -1.67
LINC00560-201ENST00000564593 PTPRCP08575 1304 aa4.6□□□□□ -1.67
LINC00560-201ENST00000564593 IGLV5-37A0A075B6J1 123 aa4.59□□□□□ -1.67
LINC00560-201ENST00000564593 CLEC18AA5D8T8 446 aa4.59□□□□□ -1.67
LINC00560-201ENST00000564593 MID1O15344 667 aa4.59□□□□□ -1.67
LINC00560-201ENST00000564593 SLC16A5O15375 505 aa4.59□□□□□ -1.67
LINC00560-201ENST00000564593 NDUFS4O43181 175 aa4.59□□□□□ -1.67
LINC00560-201ENST00000564593 PSMD10O75832 226 aa4.59□□□□□ -1.67
LINC00560-201ENST00000564593 ZNF12P17014 697 aa4.59□□□□□ -1.67
LINC00560-201ENST00000564593 S1PR1P21453 382 aa4.59□□□□□ -1.67
LINC00560-201ENST00000564593 TMPOP42166 694 aaKnown RBP4.59□□□□□ -1.67
LINC00560-201ENST00000564593 PPP5CP53041 499 aa4.59□□□□□ -1.67
LINC00560-201ENST00000564593 POLGP54098 1239 aaPredicted RBP4.59□□□□□ -1.67
LINC00560-201ENST00000564593 LINC00205P59089 165 aa4.59□□□□□ -1.67
LINC00560-201ENST00000564593 SIRPAP78324 504 aa4.59□□□□□ -1.67
LINC00560-201ENST00000564593 EGR4Q05215 589 aa4.59□□□□□ -1.67
LINC00560-201ENST00000564593 SNTB1Q13884 538 aaKnown RBP4.59□□□□□ -1.67
LINC00560-201ENST00000564593 PLPPR4Q7Z2D5 763 aa4.59□□□□□ -1.67
LINC00560-201ENST00000564593 ATG9AQ7Z3C6 839 aa4.59□□□□□ -1.67
LINC00560-201ENST00000564593 GALNT13Q8IUC8 556 aa4.59□□□□□ -1.67
LINC00560-201ENST00000564593 MAP7D3Q8IWC1 876 aa4.59□□□□□ -1.67
LINC00560-201ENST00000564593 PM20D2Q8IYS1 436 aa4.59□□□□□ -1.67
LINC00560-201ENST00000564593 SLC5A8Q8N695 610 aa4.59□□□□□ -1.67
LINC00560-201ENST00000564593 GCSAMQ8N6F7 178 aa4.59□□□□□ -1.67
LINC00560-201ENST00000564593 IQCF1Q8N6M8 205 aa4.59□□□□□ -1.67
LINC00560-201ENST00000564593 ZNF114Q8NC26 417 aa4.59□□□□□ -1.67
LINC00560-201ENST00000564593 CLEC18CQ8NCF0 446 aa4.59□□□□□ -1.67
LINC00560-201ENST00000564593 TBC1D16Q8TBP0 767 aa4.59□□□□□ -1.67
LINC00560-201ENST00000564593 ELP5Q8TE02 316 aa4.59□□□□□ -1.67
LINC00560-201ENST00000564593 SCARB1Q8WTV0 552 aa4.59□□□□□ -1.67
LINC00560-201ENST00000564593 SIX4Q9UIU6 781 aa4.59□□□□□ -1.67
LINC00560-201ENST00000564593 ANAPC2Q9UJX6 822 aa4.59□□□□□ -1.67
LINC00560-201ENST00000564593 AMDHD2Q9Y303 409 aa4.59□□□□□ -1.67
LINC00560-201ENST00000564593 PRAG1Q86YV5 1406 aa4.58□□□□□ -1.68
LINC00560-201ENST00000564593 KCNA5P22460 613 aa4.58□□□□□ -1.68
LINC00560-201ENST00000564593 NR2F2P24468 414 aa4.58□□□□□ -1.68
LINC00560-201ENST00000564593 EEF1DP29692 281 aaKnown RBP4.58□□□□□ -1.68
LINC00560-201ENST00000564593 CDKN2AP42771 156 aaKnown RBP4.58□□□□□ -1.68
LINC00560-201ENST00000564593 CD81P60033 236 aa4.58□□□□□ -1.68
LINC00560-201ENST00000564593 ZNF534Q76KX8 674 aa4.58□□□□□ -1.68
LINC00560-201ENST00000564593 FBXO39Q8N4B4 442 aa4.58□□□□□ -1.68
LINC00560-201ENST00000564593 TDRD5Q8NAT2 981 aaKnown RBP4.58□□□□□ -1.68
LINC00560-201ENST00000564593 PIGTQ969N2 578 aa4.58□□□□□ -1.68
LINC00560-201ENST00000564593 ZNF224Q9NZL3 707 aa4.58□□□□□ -1.68
LINC00560-201ENST00000564593 CRNNQ9UBG3 495 aaPredicted RBP4.58□□□□□ -1.68
LINC00560-201ENST00000564593 ZHX1Q9UKY1 873 aaPredicted RBP4.58□□□□□ -1.68
LINC00560-201ENST00000564593 KCNS2Q9ULS6 477 aa4.58□□□□□ -1.68
LINC00560-201ENST00000564593 WBP11Q9Y2W2 641 aaKnown RBP4.58□□□□□ -1.68
LINC00560-201ENST00000564593 PDS5AQ29RF7 1337 aaKnown RBP4.58□□□□□ -1.68
LINC00560-201ENST00000564593 TCRBV21S2A2A0A5A6 115 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms