RNA–Protein interactions for RNA: ENST00000564252.1

NME3-206, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 599 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-206ENST00000564252 GFERP55789 205 aa23.52■■□□□ 1.36
NME3-206ENST00000564252 TMEM26Q6ZUK4 368 aa23.52■■□□□ 1.36
NME3-206ENST00000564252 ZNF547Q8IVP9 402 aa23.52■■□□□ 1.36
NME3-206ENST00000564252 SLC25A18Q9H1K4 315 aa23.52■■□□□ 1.36
NME3-206ENST00000564252 ADNPQ9H2P0 1102 aa23.52■■□□□ 1.36
NME3-206ENST00000564252 SIDT1Q9NXL6 827 aaKnown RBP23.52■■□□□ 1.36
NME3-206ENST00000564252 UBP1Q9NZI7 540 aa23.52■■□□□ 1.36
NME3-206ENST00000564252 DNAJC16Q9Y2G8 782 aa23.52■■□□□ 1.36
NME3-206ENST00000564252 LOC101059948A0A1B0GTJ6 334 aa23.51■■□□□ 1.35
NME3-206ENST00000564252 ZNF891A8MT65 544 aaPredicted RBP23.51■■□□□ 1.35
NME3-206ENST00000564252 CAPN5O15484 640 aaPredicted RBP23.51■■□□□ 1.35
NME3-206ENST00000564252 PMPCBO75439 489 aa23.51■■□□□ 1.35
NME3-206ENST00000564252 STK17BO94768 372 aa23.51■■□□□ 1.35
NME3-206ENST00000564252 TNNT1P13805 278 aa23.51■■□□□ 1.35
NME3-206ENST00000564252 CD68P34810 354 aaPredicted RBP23.51■■□□□ 1.35
NME3-206ENST00000564252 CDKN2BP42772 138 aa23.51■■□□□ 1.35
NME3-206ENST00000564252 NR2C2P49116 596 aa23.51■■□□□ 1.35
NME3-206ENST00000564252 TCEAL1Q15170 157 aa23.51■■□□□ 1.35
NME3-206ENST00000564252 TAZQ16635 292 aa23.51■■□□□ 1.35
NME3-206ENST00000564252 ODF2Q5BJF6 829 aa23.51■■□□□ 1.35
NME3-206ENST00000564252 C9orf72Q96LT7 481 aa23.51■■□□□ 1.35
NME3-206ENST00000564252 VPS35Q96QK1 796 aa23.51■■□□□ 1.35
NME3-206ENST00000564252 SRPK1Q96SB4 655 aaKnown RBP23.51■■□□□ 1.35
NME3-206ENST00000564252 GPN2Q9H9Y4 310 aaPredicted RBP23.51■■□□□ 1.35
NME3-206ENST00000564252 SAE1Q9UBE0 346 aaPredicted RBP23.51■■□□□ 1.35
NME3-206ENST00000564252 SLC30A1Q9Y6M5 507 aa23.51■■□□□ 1.35
NME3-206ENST00000564252 ZNF106Q9H2Y7 1883 aaKnown RBP23.5■■□□□ 1.35
NME3-206ENST00000564252 POLR1CO15160 346 aaPredicted RBP23.5■■□□□ 1.35
NME3-206ENST00000564252 UBXN7O94888 489 aa23.5■■□□□ 1.35
NME3-206ENST00000564252 CDK14O94921 469 aa23.5■■□□□ 1.35
NME3-206ENST00000564252 DLGAP3O95886 979 aa23.5■■□□□ 1.35
NME3-206ENST00000564252 VIPP01282 170 aa23.5■■□□□ 1.35
NME3-206ENST00000564252 TPM1P09493 284 aa23.5■■□□□ 1.35
NME3-206ENST00000564252 BRAFP15056 766 aa23.5■■□□□ 1.35
NME3-206ENST00000564252 ABHD18Q0P651 414 aa23.5■■□□□ 1.35
NME3-206ENST00000564252 SEPT7Q16181 437 aaKnown RBP23.5■■□□□ 1.35
NME3-206ENST00000564252 CCDC70Q6NSX1 233 aa23.5■■□□□ 1.35
NME3-206ENST00000564252 ATG14Q6ZNE5 492 aa23.5■■□□□ 1.35
NME3-206ENST00000564252 C11orf96Q7Z7L8 435 aa23.5■■□□□ 1.35
NME3-206ENST00000564252 TRIM48Q8IWZ4 208 aa23.5■■□□□ 1.35
NME3-206ENST00000564252 BPIFA1Q9NP55 256 aa23.5■■□□□ 1.35
NME3-206ENST00000564252 PDZK1P1A8MUH7 402 aa23.49■■□□□ 1.35
NME3-206ENST00000564252 NKX2-8O15522 239 aa23.49■■□□□ 1.35
NME3-206ENST00000564252 PECAM1P16284 738 aaPredicted RBP23.49■■□□□ 1.35
NME3-206ENST00000564252 TYRP1P17643 537 aa23.49■■□□□ 1.35
NME3-206ENST00000564252 COMTP21964 271 aa23.49■■□□□ 1.35
NME3-206ENST00000564252 CSRP3P50461 194 aa23.49■■□□□ 1.35
NME3-206ENST00000564252 POLE2P56282 527 aa23.49■■□□□ 1.35
NME3-206ENST00000564252 WASHC5Q12768 1159 aa23.49■■□□□ 1.35
NME3-206ENST00000564252 NOMO1Q15155 1222 aa23.49■■□□□ 1.35
NME3-206ENST00000564252 ATP13A5Q4VNC0 1218 aa23.49■■□□□ 1.35
NME3-206ENST00000564252 KDELC1Q6UW63 502 aa23.49■■□□□ 1.35
NME3-206ENST00000564252 ABRAXAS1Q6UWZ7 409 aa23.49■■□□□ 1.35
NME3-206ENST00000564252 UNC5BQ8IZJ1 945 aa23.49■■□□□ 1.35
NME3-206ENST00000564252 TFB1MQ8WVM0 346 aaKnown RBP23.49■■□□□ 1.35
NME3-206ENST00000564252 KIAA1143Q96AT1 154 aaPredicted RBP23.49■■□□□ 1.35
NME3-206ENST00000564252 CATSPER2Q96P56 530 aa23.49■■□□□ 1.35
NME3-206ENST00000564252 TRIT1Q9H3H1 467 aaKnown RBP23.49■■□□□ 1.35
NME3-206ENST00000564252 IL17BQ9UHF5 180 aa23.49■■□□□ 1.35
NME3-206ENST00000564252 FAM153AQ9UHL3 310 aa23.49■■□□□ 1.35
NME3-206ENST00000564252 INTUQ9ULD6 942 aa23.49■■□□□ 1.35
NME3-206ENST00000564252 LOC285095A0A1B0GVY8 99 aa23.48■■□□□ 1.35
NME3-206ENST00000564252 SPOPO43791 374 aa23.48■■□□□ 1.35
NME3-206ENST00000564252 NFKB1P19838 968 aa23.48■■□□□ 1.35
NME3-206ENST00000564252 PTMSP20962 102 aa23.48■■□□□ 1.35
NME3-206ENST00000564252 RPL10P27635 214 aaKnown RBP23.48■■□□□ 1.35
NME3-206ENST00000564252 HMGCLP35914 325 aa23.48■■□□□ 1.35
NME3-206ENST00000564252 KCNAB2Q13303 367 aa23.48■■□□□ 1.35
NME3-206ENST00000564252 TFDP2Q14188 446 aa23.48■■□□□ 1.35
NME3-206ENST00000564252 AGAP9Q5VTM2 703 aa23.48■■□□□ 1.35
NME3-206ENST00000564252 WASH2PQ6VEQ5 465 aa23.48■■□□□ 1.35
NME3-206ENST00000564252 BZW1Q7L1Q6 419 aaKnown RBP23.48■■□□□ 1.35
NME3-206ENST00000564252 TTC30BQ8N4P2 665 aa23.48■■□□□ 1.35
NME3-206ENST00000564252 EFHD1Q9BUP0 239 aa23.48■■□□□ 1.35
NME3-206ENST00000564252 SLC40A1Q9NP59 571 aa23.48■■□□□ 1.35
NME3-206ENST00000564252 WASH6PQ9NQA3 447 aa23.48■■□□□ 1.35
NME3-206ENST00000564252 POT1Q9NUX5 634 aa23.48■■□□□ 1.35
NME3-206ENST00000564252 HECTD1Q9ULT8 2610 aa23.47■■□□□ 1.35
NME3-206ENST00000564252 OR52A4PA6NMU1 304 aa23.47■■□□□ 1.35
NME3-206ENST00000564252 CST8O60676 142 aa23.47■■□□□ 1.35
NME3-206ENST00000564252 CCR10P46092 362 aa23.47■■□□□ 1.35
NME3-206ENST00000564252 DRG2P55039 364 aaKnown RBP23.47■■□□□ 1.35
NME3-206ENST00000564252 WNT3AP56704 352 aa23.47■■□□□ 1.35
NME3-206ENST00000564252 ADCY2Q08462 1091 aa23.47■■□□□ 1.35
NME3-206ENST00000564252 TMEM115Q12893 351 aaPredicted RBP23.47■■□□□ 1.35
NME3-206ENST00000564252 LLGL1Q15334 1064 aa23.47■■□□□ 1.35
NME3-206ENST00000564252 SIRPB2Q5JXA9 342 aa23.47■■□□□ 1.35
NME3-206ENST00000564252 SPOCD1Q6ZMY3 1216 aa23.47■■□□□ 1.35
NME3-206ENST00000564252 TGM7Q96PF1 710 aa23.47■■□□□ 1.35
NME3-206ENST00000564252 TRABDQ9H4I3 376 aa23.47■■□□□ 1.35
NME3-206ENST00000564252 IL26Q9NPH9 171 aa23.47■■□□□ 1.35
NME3-206ENST00000564252 TUBD1Q9UJT1 453 aa23.47■■□□□ 1.35
NME3-206ENST00000564252 TOX3O15405 576 aaPredicted RBP23.46■■□□□ 1.35
NME3-206ENST00000564252 PSTPIP1O43586 416 aa23.46■■□□□ 1.35
NME3-206ENST00000564252 PRKAR1AP10644 381 aa23.46■■□□□ 1.35
NME3-206ENST00000564252 AMD1P17707 334 aa23.46■■□□□ 1.35
NME3-206ENST00000564252 IDSP22304 550 aa23.46■■□□□ 1.35
NME3-206ENST00000564252 STAT5AP42229 794 aa23.46■■□□□ 1.35
NME3-206ENST00000564252 LEPRP48357 1165 aaKnown RBP23.46■■□□□ 1.35
NME3-206ENST00000564252 CDC20Q12834 499 aa23.46■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms