RNA–Protein interactions for RNA: ENST00000564096.1

CLK3-214, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 805 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-214ENST00000564096 CHRM3P20309 590 aa12.67□□□□□ -0.38
CLK3-214ENST00000564096 NR1D1P20393 614 aa12.67□□□□□ -0.38
CLK3-214ENST00000564096 HTR1BP28222 390 aa12.67□□□□□ -0.38
CLK3-214ENST00000564096 HPDP32754 393 aaPredicted RBP12.67□□□□□ -0.38
CLK3-214ENST00000564096 IGFALSP35858 605 aa12.67□□□□□ -0.38
CLK3-214ENST00000564096 SKIV2L2P42285 1042 aaKnown RBP12.67□□□□□ -0.38
CLK3-214ENST00000564096 KIAA1024LP59773 190 aa12.67□□□□□ -0.38
CLK3-214ENST00000564096 RPL6Q02878 288 aaKnown RBP12.67□□□□□ -0.38
CLK3-214ENST00000564096 GSTM4Q03013 218 aa12.67□□□□□ -0.38
CLK3-214ENST00000564096 FGL2Q14314 439 aa12.67□□□□□ -0.38
CLK3-214ENST00000564096 INPP5AQ14642 412 aa12.67□□□□□ -0.38
CLK3-214ENST00000564096 SEPT7Q16181 437 aaKnown RBP12.67□□□□□ -0.38
CLK3-214ENST00000564096 TMEM31Q5JXX7 168 aa12.67□□□□□ -0.38
CLK3-214ENST00000564096 CTSL3PQ5NE16 218 aa12.67□□□□□ -0.38
CLK3-214ENST00000564096 KYAT3Q6YP21 454 aaKnown RBP12.67□□□□□ -0.38
CLK3-214ENST00000564096 MICALCLQ6ZW33 695 aa12.67□□□□□ -0.38
CLK3-214ENST00000564096 CMC1Q7Z7K0 106 aa12.67□□□□□ -0.38
CLK3-214ENST00000564096 WDR5BQ86VZ2 330 aa12.67□□□□□ -0.38
CLK3-214ENST00000564096 LONP2Q86WA8 852 aa12.67□□□□□ -0.38
CLK3-214ENST00000564096 KRT222Q8N1A0 295 aa12.67□□□□□ -0.38
CLK3-214ENST00000564096 C4orf33Q8N1A6 199 aa12.67□□□□□ -0.38
CLK3-214ENST00000564096 FBXL6Q8N531 539 aa12.67□□□□□ -0.38
CLK3-214ENST00000564096 RLN3Q8WXF3 142 aa12.67□□□□□ -0.38
CLK3-214ENST00000564096 KLK6Q92876 244 aa12.67□□□□□ -0.38
CLK3-214ENST00000564096 CENPTQ96BT3 561 aa12.67□□□□□ -0.38
CLK3-214ENST00000564096 BIRC8Q96P09 236 aa12.67□□□□□ -0.38
CLK3-214ENST00000564096 SELENOSQ9BQE4 189 aa12.67□□□□□ -0.38
CLK3-214ENST00000564096 BOCQ9BWV1 1114 aa12.67□□□□□ -0.38
CLK3-214ENST00000564096 TEX101Q9BY14 249 aa12.67□□□□□ -0.38
CLK3-214ENST00000564096 VPS11Q9H270 941 aa12.67□□□□□ -0.38
CLK3-214ENST00000564096 EPHX3Q9H6B9 360 aa12.67□□□□□ -0.38
CLK3-214ENST00000564096 CNOT10Q9H9A5 744 aaKnown RBP12.67□□□□□ -0.38
CLK3-214ENST00000564096 CAB39LQ9H9S4 337 aa12.67□□□□□ -0.38
CLK3-214ENST00000564096 SYTL2Q9HCH5 934 aa12.67□□□□□ -0.38
CLK3-214ENST00000564096 GPAMQ9HCL2 828 aa12.67□□□□□ -0.38
CLK3-214ENST00000564096 NKIRAS1Q9NYS0 192 aa12.67□□□□□ -0.38
CLK3-214ENST00000564096 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.67□□□□□ -0.38
CLK3-214ENST00000564096 HMX2A2RU54 273 aa12.66□□□□□ -0.38
CLK3-214ENST00000564096 H3BQF6 201 aa12.66□□□□□ -0.38
CLK3-214ENST00000564096 KPNA5O15131 536 aa12.66□□□□□ -0.38
CLK3-214ENST00000564096 MTX2O75431 263 aa12.66□□□□□ -0.38
CLK3-214ENST00000564096 RFPL1O75677 317 aa12.66□□□□□ -0.38
CLK3-214ENST00000564096 CDK14O94921 469 aa12.66□□□□□ -0.38
CLK3-214ENST00000564096 ASMTLO95671 621 aa12.66□□□□□ -0.38
CLK3-214ENST00000564096 IGHV4-34P06331 123 aa12.66□□□□□ -0.38
CLK3-214ENST00000564096 GSTA1P08263 222 aa12.66□□□□□ -0.38
CLK3-214ENST00000564096 PYGBP11216 843 aa12.66□□□□□ -0.38
CLK3-214ENST00000564096 OAS2P29728 719 aaKnown RBP12.66□□□□□ -0.38
CLK3-214ENST00000564096 SLC26A3P40879 764 aa12.66□□□□□ -0.38
CLK3-214ENST00000564096 CCT5P48643 541 aa12.66□□□□□ -0.38
CLK3-214ENST00000564096 PRLHRP49683 370 aa12.66□□□□□ -0.38
CLK3-214ENST00000564096 TAS2R39P59534 338 aa12.66□□□□□ -0.38
CLK3-214ENST00000564096 TSNAXIP1Q2TAA8 658 aa12.66□□□□□ -0.38
CLK3-214ENST00000564096 BCL7AQ4VC05 210 aa12.66□□□□□ -0.38
CLK3-214ENST00000564096 SYTL3Q4VX76 610 aa12.66□□□□□ -0.38
CLK3-214ENST00000564096 LRRC8EQ6NSJ5 796 aa12.66□□□□□ -0.38
CLK3-214ENST00000564096 KLC3Q6P597 504 aa12.66□□□□□ -0.38
CLK3-214ENST00000564096 ZNF549Q6P9A3 640 aa12.66□□□□□ -0.38
CLK3-214ENST00000564096 EXOC3L1Q86VI1 746 aa12.66□□□□□ -0.38
CLK3-214ENST00000564096 TRAPPC5Q8IUR0 188 aa12.66□□□□□ -0.38
CLK3-214ENST00000564096 C1orf210Q8IVY1 113 aa12.66□□□□□ -0.38
CLK3-214ENST00000564096 PLA2G15Q8NCC3 412 aa12.66□□□□□ -0.38
CLK3-214ENST00000564096 FAM76AQ8TAV0 307 aa12.66□□□□□ -0.38
CLK3-214ENST00000564096 COX14Q96I36 57 aa12.66□□□□□ -0.38
CLK3-214ENST00000564096 SERAC1Q96JX3 654 aa12.66□□□□□ -0.38
CLK3-214ENST00000564096 KLF6Q99612 283 aaPredicted RBP12.66□□□□□ -0.38
CLK3-214ENST00000564096 MYOCQ99972 504 aa12.66□□□□□ -0.38
CLK3-214ENST00000564096 RMI1Q9H9A7 625 aa12.66□□□□□ -0.38
CLK3-214ENST00000564096 TRIM39Q9HCM9 518 aa12.66□□□□□ -0.38
CLK3-214ENST00000564096 FZD3Q9NPG1 666 aa12.66□□□□□ -0.38
CLK3-214ENST00000564096 MBNL1Q9NR56 388 aaKnown RBP12.66□□□□□ -0.38
CLK3-214ENST00000564096 SPATS2LQ9NUQ6 558 aaKnown RBP12.66□□□□□ -0.38
CLK3-214ENST00000564096 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.66□□□□□ -0.38
CLK3-214ENST00000564096 FBXO4Q9UKT5 387 aa12.66□□□□□ -0.38
CLK3-214ENST00000564096 TMPRSS11EQ9UL52 423 aa12.66□□□□□ -0.38
CLK3-214ENST00000564096 ACOT9Q9Y305 439 aa12.66□□□□□ -0.38
CLK3-214ENST00000564096 A0A1W2PPC4 97 aa12.65□□□□□ -0.38
CLK3-214ENST00000564096 A0A1W2PPM1 405 aa12.65□□□□□ -0.38
CLK3-214ENST00000564096 KLHL33A6NCF5 533 aa12.65□□□□□ -0.38
CLK3-214ENST00000564096 GOLGA8RI6L899 631 aa12.65□□□□□ -0.38
CLK3-214ENST00000564096 RAD51BO15315 384 aa12.65□□□□□ -0.38
CLK3-214ENST00000564096 PRPF4O43172 522 aaKnown RBP eCLIP12.65□□□□□ -0.38
CLK3-214ENST00000564096 PHGDHO43175 533 aaKnown RBP12.65□□□□□ -0.38
CLK3-214ENST00000564096 NIPSNAP2O75323 286 aa12.65□□□□□ -0.38
CLK3-214ENST00000564096 ZWINTO95229 277 aa12.65□□□□□ -0.38
CLK3-214ENST00000564096 TRIM16O95361 564 aa12.65□□□□□ -0.38
CLK3-214ENST00000564096 HOXC4P09017 264 aaPredicted RBP12.65□□□□□ -0.38
CLK3-214ENST00000564096 COL6A2P12110 1019 aa12.65□□□□□ -0.38
CLK3-214ENST00000564096 ZNF37AP17032 561 aaPredicted RBP12.65□□□□□ -0.38
CLK3-214ENST00000564096 CD27P26842 260 aa12.65□□□□□ -0.38
CLK3-214ENST00000564096 TRIM23P36406 574 aa12.65□□□□□ -0.38
CLK3-214ENST00000564096 RABIFP47224 123 aa12.65□□□□□ -0.38
CLK3-214ENST00000564096 RGS4P49798 205 aa12.65□□□□□ -0.38
CLK3-214ENST00000564096 THOP1P52888 689 aa12.65□□□□□ -0.38
CLK3-214ENST00000564096 CDKN2DP55273 166 aa12.65□□□□□ -0.38
CLK3-214ENST00000564096 YPEL5P62699 121 aa12.65□□□□□ -0.38
CLK3-214ENST00000564096 PPP2R2AP63151 447 aa12.65□□□□□ -0.38
CLK3-214ENST00000564096 B4GALNT1Q00973 533 aa12.65□□□□□ -0.38
CLK3-214ENST00000564096 SLC18A2Q05940 514 aa12.65□□□□□ -0.38
CLK3-214ENST00000564096 TMEM115Q12893 351 aaPredicted RBP12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms