RNA–Protein interactions for RNA: ENST00000564068.1

COMMD4-209, Transcript of COMM domain containing 4, humanhuman

Gene COMMD4, Length 4,204 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-209ENST00000564068 UGT2B11O75310 529 aa12.51□□□□□ -0.41
COMMD4-209ENST00000564068 PRKD3O94806 890 aa12.51□□□□□ -0.41
COMMD4-209ENST00000564068 ZNF7P17097 686 aaPredicted RBP12.51□□□□□ -0.41
COMMD4-209ENST00000564068 ARSFP54793 590 aa12.51□□□□□ -0.41
COMMD4-209ENST00000564068 UFM1P61960 85 aa12.51□□□□□ -0.41
COMMD4-209ENST00000564068 SLC13A2Q13183 592 aa12.51□□□□□ -0.41
COMMD4-209ENST00000564068 SKIV2LQ15477 1246 aaKnown RBP12.51□□□□□ -0.41
COMMD4-209ENST00000564068 PHKG1Q16816 387 aa12.51□□□□□ -0.41
COMMD4-209ENST00000564068 FAM174BQ3ZCQ3 159 aa12.51□□□□□ -0.41
COMMD4-209ENST00000564068 TSTD2Q5T7W7 516 aa12.51□□□□□ -0.41
COMMD4-209ENST00000564068 DLK2Q6UY11 383 aa12.51□□□□□ -0.41
COMMD4-209ENST00000564068 OR4K2Q8NGD2 314 aa12.51□□□□□ -0.41
COMMD4-209ENST00000564068 SUN5Q8TC36 379 aa12.51□□□□□ -0.41
COMMD4-209ENST00000564068 STON2Q8WXE9 905 aa12.51□□□□□ -0.41
COMMD4-209ENST00000564068 PAWRQ96IZ0 340 aaKnown RBP12.51□□□□□ -0.41
COMMD4-209ENST00000564068 ZFP42Q96MM3 310 aa12.51□□□□□ -0.41
COMMD4-209ENST00000564068 TDRD1Q9BXT4 1180 aaKnown RBP12.51□□□□□ -0.41
COMMD4-209ENST00000564068 ABCB9Q9NP78 766 aa12.51□□□□□ -0.41
COMMD4-209ENST00000564068 GDAP2Q9NXN4 497 aa12.51□□□□□ -0.41
COMMD4-209ENST00000564068 TCAF2A6NFQ2 919 aa12.5□□□□□ -0.41
COMMD4-209ENST00000564068 G3V2L1 256 aa12.5□□□□□ -0.41
COMMD4-209ENST00000564068 MYL12BO14950 172 aa12.5□□□□□ -0.41
COMMD4-209ENST00000564068 GRID2O43424 1007 aa12.5□□□□□ -0.41
COMMD4-209ENST00000564068 NDUFB5O43674 189 aa12.5□□□□□ -0.41
COMMD4-209ENST00000564068 CRATP43155 626 aa12.5□□□□□ -0.41
COMMD4-209ENST00000564068 ALDH6A1Q02252 535 aaKnown RBP12.5□□□□□ -0.41
COMMD4-209ENST00000564068 RFTN1Q14699 578 aaPredicted RBP12.5□□□□□ -0.41
COMMD4-209ENST00000564068 PYDC2Q56P42 97 aa12.5□□□□□ -0.41
COMMD4-209ENST00000564068 CASP12Q6UXS9 341 aa12.5□□□□□ -0.41
COMMD4-209ENST00000564068 DCDC5Q6ZRR9 648 aa12.5□□□□□ -0.41
COMMD4-209ENST00000564068 PIWIL3Q7Z3Z3 882 aaKnown RBP12.5□□□□□ -0.41
COMMD4-209ENST00000564068 RAB43Q86YS6 212 aa12.5□□□□□ -0.41
COMMD4-209ENST00000564068 OR52J3Q8NH60 311 aa12.5□□□□□ -0.41
COMMD4-209ENST00000564068 KCNS3Q9BQ31 491 aa12.5□□□□□ -0.41
COMMD4-209ENST00000564068 DCSTAMPQ9H295 470 aa12.5□□□□□ -0.41
COMMD4-209ENST00000564068 ABCC13Q9NSE7 274 aa12.5□□□□□ -0.41
COMMD4-209ENST00000564068 DNAJB9Q9UBS3 223 aa12.5□□□□□ -0.41
COMMD4-209ENST00000564068 ARIH1Q9Y4X5 557 aaPredicted RBP12.5□□□□□ -0.41
COMMD4-209ENST00000564068 TTC24A2A3L6 582 aaPredicted RBP12.5□□□□□ -0.41
COMMD4-209ENST00000564068 KLRG2A4D1S0 409 aaPredicted RBP12.5□□□□□ -0.41
COMMD4-209ENST00000564068 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.5□□□□□ -0.41
COMMD4-209ENST00000564068 CCRL2O00421 344 aa12.5□□□□□ -0.41
COMMD4-209ENST00000564068 SLC22A1O15245 554 aa12.5□□□□□ -0.41
COMMD4-209ENST00000564068 WBP4O75554 376 aaKnown RBP12.5□□□□□ -0.41
COMMD4-209ENST00000564068 OTCP00480 354 aa12.5□□□□□ -0.41
COMMD4-209ENST00000564068 RHOCP08134 193 aa12.5□□□□□ -0.41
COMMD4-209ENST00000564068 SLC35E2BP0CK96 405 aa12.5□□□□□ -0.41
COMMD4-209ENST00000564068 GLDCP23378 1020 aa12.5□□□□□ -0.41
COMMD4-209ENST00000564068 CD97P48960 835 aa12.5□□□□□ -0.41
COMMD4-209ENST00000564068 SLC11A2P49281 568 aa12.5□□□□□ -0.41
COMMD4-209ENST00000564068 SRP54P61011 504 aaKnown RBP12.5□□□□□ -0.41
COMMD4-209ENST00000564068 RHOAP61586 193 aa12.5□□□□□ -0.41
COMMD4-209ENST00000564068 ACSM2AQ08AH3 577 aa12.5□□□□□ -0.41
COMMD4-209ENST00000564068 NIPAL4Q0D2K0 466 aa12.5□□□□□ -0.41
COMMD4-209ENST00000564068 BOP1Q14137 746 aaKnown RBP12.5□□□□□ -0.41
COMMD4-209ENST00000564068 GNASQ5JWF2 1037 aa12.5□□□□□ -0.41
COMMD4-209ENST00000564068 ACSM2BQ68CK6 577 aa12.5□□□□□ -0.41
COMMD4-209ENST00000564068 TTC23LQ6PF05 361 aa12.5□□□□□ -0.41
COMMD4-209ENST00000564068 GLB1LQ6UWU2 654 aa12.5□□□□□ -0.41
COMMD4-209ENST00000564068 CMTR2Q8IYT2 770 aaKnown RBP12.5□□□□□ -0.41
COMMD4-209ENST00000564068 LGI2Q8N0V4 545 aa12.5□□□□□ -0.41
COMMD4-209ENST00000564068 FEM1CQ96JP0 617 aa12.5□□□□□ -0.41
COMMD4-209ENST00000564068 ZNF347Q96SE7 839 aa12.5□□□□□ -0.41
COMMD4-209ENST00000564068 WDR83Q9BRX9 315 aaKnown RBP12.5□□□□□ -0.41
COMMD4-209ENST00000564068 NAA50Q9GZZ1 169 aaKnown RBP12.5□□□□□ -0.41
COMMD4-209ENST00000564068 RPF2Q9H7B2 306 aaKnown RBP12.5□□□□□ -0.41
COMMD4-209ENST00000564068 TOR4AQ9NXH8 423 aa12.5□□□□□ -0.41
COMMD4-209ENST00000564068 MYO5AQ9Y4I1 1855 aaKnown RBP12.5□□□□□ -0.41
COMMD4-209ENST00000564068 A0A1B0GTW7 788 aa12.5□□□□□ -0.41
COMMD4-209ENST00000564068 NOTOA8MTQ0 251 aa12.5□□□□□ -0.41
COMMD4-209ENST00000564068 TSPAN19P0C672 248 aa12.5□□□□□ -0.41
COMMD4-209ENST00000564068 GSTT2P0CG29 244 aa12.5□□□□□ -0.41
COMMD4-209ENST00000564068 GSTT2BP0CG30 244 aa12.5□□□□□ -0.41
COMMD4-209ENST00000564068 EPB42P16452 691 aa12.5□□□□□ -0.41
COMMD4-209ENST00000564068 SCNN1GP51170 649 aa12.5□□□□□ -0.41
COMMD4-209ENST00000564068 HERVK_113P63132 956 aa12.5□□□□□ -0.41
COMMD4-209ENST00000564068 QPRTQ15274 297 aa12.5□□□□□ -0.41
COMMD4-209ENST00000564068 GPR153Q6NV75 609 aa12.5□□□□□ -0.41
COMMD4-209ENST00000564068 TTC29Q8NA56 475 aaPredicted RBP12.5□□□□□ -0.41
COMMD4-209ENST00000564068 TRUB1Q8WWH5 349 aaKnown RBP12.5□□□□□ -0.41
COMMD4-209ENST00000564068 ERVK-6Q9BXR3 956 aa12.5□□□□□ -0.41
COMMD4-209ENST00000564068 FAM126AQ9BYI3 521 aaPredicted RBP12.5□□□□□ -0.41
COMMD4-209ENST00000564068 GALPQ9UBC7 116 aa12.5□□□□□ -0.41
COMMD4-209ENST00000564068 RPS6KA6Q9UK32 745 aa12.5□□□□□ -0.41
COMMD4-209ENST00000564068 PDE9AO76083 593 aa12.49□□□□□ -0.41
COMMD4-209ENST00000564068 CYP2C18P33260 490 aa12.49□□□□□ -0.41
COMMD4-209ENST00000564068 MXD1Q05195 221 aa12.49□□□□□ -0.41
COMMD4-209ENST00000564068 HSPA14Q0VDF9 509 aa12.49□□□□□ -0.41
COMMD4-209ENST00000564068 C11orf96Q7Z7L8 435 aa12.49□□□□□ -0.41
COMMD4-209ENST00000564068 ZDHHC21Q8IVQ6 265 aa12.49□□□□□ -0.41
COMMD4-209ENST00000564068 CEP97Q8IW35 865 aa12.49□□□□□ -0.41
COMMD4-209ENST00000564068 MYLPFQ96A32 169 aa12.49□□□□□ -0.41
COMMD4-209ENST00000564068 VPS28Q9UK41 221 aa12.49□□□□□ -0.41
COMMD4-209ENST00000564068 CXCR6O00574 342 aa12.49□□□□□ -0.41
COMMD4-209ENST00000564068 JUNP05412 331 aaKnown RBP12.49□□□□□ -0.41
COMMD4-209ENST00000564068 TP53BP2Q13625 1128 aa12.49□□□□□ -0.41
COMMD4-209ENST00000564068 RBM48Q5RL73 367 aaKnown RBP12.49□□□□□ -0.41
COMMD4-209ENST00000564068 RNF219Q5W0B1 726 aaPredicted RBP12.49□□□□□ -0.41
COMMD4-209ENST00000564068 KIAA0930Q6ICG6 404 aaPredicted RBP12.49□□□□□ -0.41
COMMD4-209ENST00000564068 NEK5Q6P3R8 708 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms