RNA–Protein interactions for RNA: ENST00000563909.5

RNF40-205, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-205ENST00000563909 YBEYP58557 167 aaPredicted RBP15.72■□□□□ 0.11
RNF40-205ENST00000563909 POLR2LP62875 67 aaKnown RBP15.72■□□□□ 0.11
RNF40-205ENST00000563909 IL10RAQ13651 578 aa15.72■□□□□ 0.11
RNF40-205ENST00000563909 RTL3Q8N8U3 475 aaKnown RBP15.72■□□□□ 0.11
RNF40-205ENST00000563909 SH3KBP1Q96B97 665 aa15.72■□□□□ 0.11
RNF40-205ENST00000563909 C9orf72Q96LT7 481 aa15.72■□□□□ 0.11
RNF40-205ENST00000563909 TUBGCP5Q96RT8 1024 aa15.72■□□□□ 0.11
RNF40-205ENST00000563909 BRD8Q9H0E9 1235 aa15.72■□□□□ 0.11
RNF40-205ENST00000563909 ATP13A3Q9H7F0 1226 aa15.72■□□□□ 0.11
RNF40-205ENST00000563909 SARS2Q9NP81 518 aaKnown RBP15.72■□□□□ 0.11
RNF40-205ENST00000563909 GOLGA6AQ9NYA3 693 aa15.72■□□□□ 0.11
RNF40-205ENST00000563909 TMEM98Q9Y2Y6 226 aa15.72■□□□□ 0.11
RNF40-205ENST00000563909 RASA4BC9J798 803 aa15.71■□□□□ 0.11
RNF40-205ENST00000563909 ZNF185O15231 689 aa15.71■□□□□ 0.11
RNF40-205ENST00000563909 RASA4O43374 803 aa15.71■□□□□ 0.11
RNF40-205ENST00000563909 ZG16O60844 167 aa15.71■□□□□ 0.11
RNF40-205ENST00000563909 FGF5P12034 268 aa15.71■□□□□ 0.11
RNF40-205ENST00000563909 GFERP55789 205 aa15.71■□□□□ 0.11
RNF40-205ENST00000563909 RPS15P62841 145 aaKnown RBP15.71■□□□□ 0.11
RNF40-205ENST00000563909 DENND2CQ68D51 928 aa15.71■□□□□ 0.11
RNF40-205ENST00000563909 FAM199XQ6PEV8 388 aaPredicted RBP15.71■□□□□ 0.11
RNF40-205ENST00000563909 GDF7Q7Z4P5 450 aa15.71■□□□□ 0.11
RNF40-205ENST00000563909 SYVN1Q86TM6 617 aa15.71■□□□□ 0.11
RNF40-205ENST00000563909 PYROXD2Q8N2H3 581 aa15.71■□□□□ 0.11
RNF40-205ENST00000563909 TEKT4Q8WW24 435 aa15.71■□□□□ 0.11
RNF40-205ENST00000563909 PEBP4Q96S96 227 aa15.71■□□□□ 0.11
RNF40-205ENST00000563909 SNRNP25Q9BV90 132 aaKnown RBP15.71■□□□□ 0.11
RNF40-205ENST00000563909 TBC1D10AQ9BXI6 508 aa15.71■□□□□ 0.11
RNF40-205ENST00000563909 STN1Q9H668 368 aaKnown RBP15.71■□□□□ 0.11
RNF40-205ENST00000563909 ZWILCHQ9H900 591 aa15.71■□□□□ 0.11
RNF40-205ENST00000563909 AKIRIN1Q9H9L7 192 aaPredicted RBP15.71■□□□□ 0.11
RNF40-205ENST00000563909 UBA2Q9UBT2 640 aaPredicted RBP15.71■□□□□ 0.11
RNF40-205ENST00000563909 AP4E1Q9UPM8 1137 aa15.71■□□□□ 0.11
RNF40-205ENST00000563909 COPG1Q9Y678 874 aaKnown RBP15.71■□□□□ 0.11
RNF40-205ENST00000563909 DUSP10Q9Y6W6 482 aa15.71■□□□□ 0.11
RNF40-205ENST00000563909 MN1Q10571 1320 aaPredicted RBP15.7■□□□□ 0.1
RNF40-205ENST00000563909 POLEQ07864 2286 aa15.7■□□□□ 0.1
RNF40-205ENST00000563909 ITGA3P26006 1051 aa15.7■□□□□ 0.1
RNF40-205ENST00000563909 HTR7P34969 479 aa15.7■□□□□ 0.1
RNF40-205ENST00000563909 ZNF135P52742 658 aaPredicted RBP15.7■□□□□ 0.1
RNF40-205ENST00000563909 SLC25A11Q02978 314 aaKnown RBP15.7■□□□□ 0.1
RNF40-205ENST00000563909 PARP15Q460N3 678 aa15.7■□□□□ 0.1
RNF40-205ENST00000563909 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.7■□□□□ 0.1
RNF40-205ENST00000563909 C11orf63Q6NUN7 778 aa15.7■□□□□ 0.1
RNF40-205ENST00000563909 ZNF662Q6ZS27 426 aa15.7■□□□□ 0.1
RNF40-205ENST00000563909 MARK2Q7KZI7 788 aaKnown RBP15.7■□□□□ 0.1
RNF40-205ENST00000563909 SRLQ86TD4 932 aa15.7■□□□□ 0.1
RNF40-205ENST00000563909 RNF10Q8N5U6 811 aaKnown RBP15.7■□□□□ 0.1
RNF40-205ENST00000563909 ECHDC3Q96DC8 303 aa15.7■□□□□ 0.1
RNF40-205ENST00000563909 SCARF2Q96GP6 870 aaPredicted RBP15.7■□□□□ 0.1
RNF40-205ENST00000563909 ZNF830Q96NB3 372 aaPredicted RBP15.7■□□□□ 0.1
RNF40-205ENST00000563909 KCNF1Q9H3M0 494 aa15.7■□□□□ 0.1
RNF40-205ENST00000563909 EPB41L1Q9H4G0 881 aa15.7■□□□□ 0.1
RNF40-205ENST00000563909 DHX35Q9H5Z1 703 aaKnown RBP15.7■□□□□ 0.1
RNF40-205ENST00000563909 B4GALT6Q9UBX8 382 aa15.7■□□□□ 0.1
RNF40-205ENST00000563909 ABCA2Q9BZC7 2435 aa15.7■□□□□ 0.1
RNF40-205ENST00000563909 RARAP10276 462 aa15.69■□□□□ 0.1
RNF40-205ENST00000563909 IL1R2P27930 398 aa15.69■□□□□ 0.1
RNF40-205ENST00000563909 ETV3P41162 512 aa15.69■□□□□ 0.1
RNF40-205ENST00000563909 RGRP47804 291 aa15.69■□□□□ 0.1
RNF40-205ENST00000563909 PYCR3Q53H96 274 aa15.69■□□□□ 0.1
RNF40-205ENST00000563909 RAET1GQ6H3X3 334 aa15.69■□□□□ 0.1
RNF40-205ENST00000563909 IYDQ6PHW0 289 aa15.69■□□□□ 0.1
RNF40-205ENST00000563909 CYP4V2Q6ZWL3 525 aaPredicted RBP15.69■□□□□ 0.1
RNF40-205ENST00000563909 DAAM2Q86T65 1068 aa15.69■□□□□ 0.1
RNF40-205ENST00000563909 PPP1R3BQ86XI6 285 aa15.69■□□□□ 0.1
RNF40-205ENST00000563909 TGM7Q96PF1 710 aa15.69■□□□□ 0.1
RNF40-205ENST00000563909 LDHAL6BQ9BYZ2 381 aaPredicted RBP15.69■□□□□ 0.1
RNF40-205ENST00000563909 GPATCH2LQ9NWQ4 482 aa15.69■□□□□ 0.1
RNF40-205ENST00000563909 GPR83Q9NYM4 423 aa15.69■□□□□ 0.1
RNF40-205ENST00000563909 OSGIN2Q9Y236 505 aa15.69■□□□□ 0.1
RNF40-205ENST00000563909 B3GNT3Q9Y2A9 372 aa15.69■□□□□ 0.1
RNF40-205ENST00000563909 PPP2R2CQ9Y2T4 447 aa15.69■□□□□ 0.1
RNF40-205ENST00000563909 ALG6Q9Y672 507 aa15.69■□□□□ 0.1
RNF40-205ENST00000563909 SVILO95425 2214 aa15.69■□□□□ 0.1
RNF40-205ENST00000563909 SPG11Q96JI7 2443 aa15.68■□□□□ 0.1
RNF40-205ENST00000563909 MACROD2A1Z1Q3 448 aa15.68■□□□□ 0.1
RNF40-205ENST00000563909 F5H423 210 aaPredicted RBP15.68■□□□□ 0.1
RNF40-205ENST00000563909 SPOPO43791 374 aa15.68■□□□□ 0.1
RNF40-205ENST00000563909 CREB3O43889 395 aa15.68■□□□□ 0.1
RNF40-205ENST00000563909 RASSF9O75901 435 aa15.68■□□□□ 0.1
RNF40-205ENST00000563909 TIAF1O95411 115 aa15.68■□□□□ 0.1
RNF40-205ENST00000563909 C9P02748 559 aa15.68■□□□□ 0.1
RNF40-205ENST00000563909 TCF4P15884 667 aa15.68■□□□□ 0.1
RNF40-205ENST00000563909 COMTP21964 271 aa15.68■□□□□ 0.1
RNF40-205ENST00000563909 TAS2R40P59535 323 aa15.68■□□□□ 0.1
RNF40-205ENST00000563909 BCL2L1Q07817 233 aa15.68■□□□□ 0.1
RNF40-205ENST00000563909 RAPSNQ13702 412 aa15.68■□□□□ 0.1
RNF40-205ENST00000563909 LRP8Q14114 963 aa15.68■□□□□ 0.1
RNF40-205ENST00000563909 CNGA3Q16281 694 aa15.68■□□□□ 0.1
RNF40-205ENST00000563909 SMTNL2Q2TAL5 461 aa15.68■□□□□ 0.1
RNF40-205ENST00000563909 LRRC38Q5VT99 294 aa15.68■□□□□ 0.1
RNF40-205ENST00000563909 POLNQ7Z5Q5 900 aa15.68■□□□□ 0.1
RNF40-205ENST00000563909 SLC9B2Q86UD5 537 aa15.68■□□□□ 0.1
RNF40-205ENST00000563909 GALNT13Q8IUC8 556 aa15.68■□□□□ 0.1
RNF40-205ENST00000563909 SYCE1Q8N0S2 351 aa15.68■□□□□ 0.1
RNF40-205ENST00000563909 UMODL1-AS1Q8N2C9 162 aa15.68■□□□□ 0.1
RNF40-205ENST00000563909 UBE2Q2Q8WVN8 375 aa15.68■□□□□ 0.1
RNF40-205ENST00000563909 HSPH1Q92598 858 aa15.68■□□□□ 0.1
RNF40-205ENST00000563909 DTD2Q96FN9 168 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms