RNA–Protein interactions for RNA: ENST00000563854.1

NME3-205, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-205ENST00000563854 TMTC1Q8IUR5 882 aa17.43■□□□□ 0.38
NME3-205ENST00000563854 TTC30BQ8N4P2 665 aa17.43■□□□□ 0.38
NME3-205ENST00000563854 ACRBPQ8NEB7 543 aa17.43■□□□□ 0.38
NME3-205ENST00000563854 SNRNP27Q8WVK2 155 aaKnown RBP17.43■□□□□ 0.38
NME3-205ENST00000563854 TTC9Q92623 222 aa17.43■□□□□ 0.38
NME3-205ENST00000563854 MRFAP1L1Q96HT8 127 aa17.43■□□□□ 0.38
NME3-205ENST00000563854 TTC25Q96NG3 672 aa17.43■□□□□ 0.38
NME3-205ENST00000563854 FERMT1Q9BQL6 677 aa17.43■□□□□ 0.38
NME3-205ENST00000563854 FICDQ9BVA6 458 aa17.43■□□□□ 0.38
NME3-205ENST00000563854 LDHAL6BQ9BYZ2 381 aaPredicted RBP17.43■□□□□ 0.38
NME3-205ENST00000563854 TRABDQ9H4I3 376 aa17.43■□□□□ 0.38
NME3-205ENST00000563854 SCHIP1Q9P0W5 487 aaPredicted RBP17.43■□□□□ 0.38
NME3-205ENST00000563854 TRHDEQ9UKU6 1024 aa17.43■□□□□ 0.38
NME3-205ENST00000563854 DUSP10Q9Y6W6 482 aa17.43■□□□□ 0.38
NME3-205ENST00000563854 OR5K4A6NMS3 321 aa17.42■□□□□ 0.38
NME3-205ENST00000563854 STMND1H3BQB6 276 aa17.42■□□□□ 0.38
NME3-205ENST00000563854 CHUKO15111 745 aa17.42■□□□□ 0.38
NME3-205ENST00000563854 VEGFDO43915 354 aa17.42■□□□□ 0.38
NME3-205ENST00000563854 VIPP01282 170 aa17.42■□□□□ 0.38
NME3-205ENST00000563854 HLA-DPA1P20036 260 aa17.42■□□□□ 0.38
NME3-205ENST00000563854 RPL10P27635 214 aaKnown RBP17.42■□□□□ 0.38
NME3-205ENST00000563854 CD82P27701 267 aa17.42■□□□□ 0.38
NME3-205ENST00000563854 HMGCLP35914 325 aa17.42■□□□□ 0.38
NME3-205ENST00000563854 MPP3Q13368 585 aa17.42■□□□□ 0.38
NME3-205ENST00000563854 RAD9BQ6WBX8 426 aa17.42■□□□□ 0.38
NME3-205ENST00000563854 KIAA1328Q86T90 577 aa17.42■□□□□ 0.38
NME3-205ENST00000563854 CDKL3Q8IVW4 592 aaPredicted RBP17.42■□□□□ 0.38
NME3-205ENST00000563854 ZNF843Q8N446 348 aa17.42■□□□□ 0.38
NME3-205ENST00000563854 ACTL9Q8TC94 416 aa17.42■□□□□ 0.38
NME3-205ENST00000563854 VPS35Q96QK1 796 aa17.42■□□□□ 0.38
NME3-205ENST00000563854 GBA3Q9H227 469 aa17.42■□□□□ 0.38
NME3-205ENST00000563854 IL26Q9NPH9 171 aa17.42■□□□□ 0.38
NME3-205ENST00000563854 HACD3Q9P035 362 aa17.42■□□□□ 0.38
NME3-205ENST00000563854 TMPRSS11EQ9UL52 423 aa17.42■□□□□ 0.38
NME3-205ENST00000563854 PKP3Q9Y446 797 aa17.42■□□□□ 0.38
NME3-205ENST00000563854 B3GALT1Q9Y5Z6 326 aa17.42■□□□□ 0.38
NME3-205ENST00000563854 ATMQ13315 3056 aa17.41■□□□□ 0.38
NME3-205ENST00000563854 GLYATL1P3A0A0U1RQE8 302 aa17.41■□□□□ 0.38
NME3-205ENST00000563854 PJA2O43164 708 aa17.41■□□□□ 0.38
NME3-205ENST00000563854 UGT1A9O60656 530 aa17.41■□□□□ 0.38
NME3-205ENST00000563854 AGTP01019 485 aa17.41■□□□□ 0.38
NME3-205ENST00000563854 EPOP01588 193 aa17.41■□□□□ 0.38
NME3-205ENST00000563854 PTMAP06454 111 aaKnown RBP17.41■□□□□ 0.38
NME3-205ENST00000563854 TYRP1P17643 537 aa17.41■□□□□ 0.38
NME3-205ENST00000563854 UGT1A6P19224 532 aa17.41■□□□□ 0.38
NME3-205ENST00000563854 UGT1A1P22309 533 aa17.41■□□□□ 0.38
NME3-205ENST00000563854 UGT1A4P22310 534 aa17.41■□□□□ 0.38
NME3-205ENST00000563854 UGT1A3P35503 534 aa17.41■□□□□ 0.38
NME3-205ENST00000563854 ATP1A2P50993 1020 aa17.41■□□□□ 0.38
NME3-205ENST00000563854 CLCNKAP51800 687 aa17.41■□□□□ 0.38
NME3-205ENST00000563854 EPHA4P54764 986 aa17.41■□□□□ 0.38
NME3-205ENST00000563854 DRG2P55039 364 aaKnown RBP17.41■□□□□ 0.38
NME3-205ENST00000563854 GEMP55040 296 aa17.41■□□□□ 0.38
NME3-205ENST00000563854 EIF3EP60228 445 aaKnown RBP17.41■□□□□ 0.38
NME3-205ENST00000563854 COPS2P61201 443 aa17.41■□□□□ 0.38
NME3-205ENST00000563854 UBE2IP63279 158 aaKnown RBP17.41■□□□□ 0.38
NME3-205ENST00000563854 TMEM115Q12893 351 aaPredicted RBP17.41■□□□□ 0.38
NME3-205ENST00000563854 XRCC4Q13426 336 aa17.41■□□□□ 0.38
NME3-205ENST00000563854 CHRNA6Q15825 494 aa17.41■□□□□ 0.38
NME3-205ENST00000563854 ANKS6Q68DC2 871 aa17.41■□□□□ 0.38
NME3-205ENST00000563854 ITPRIPL1Q6GPH6 555 aa17.41■□□□□ 0.38
NME3-205ENST00000563854 AADACL2Q6P093 401 aa17.41■□□□□ 0.38
NME3-205ENST00000563854 DARS2Q6PI48 645 aaKnown RBP17.41■□□□□ 0.38
NME3-205ENST00000563854 WDR74Q6RFH5 385 aaPredicted RBP17.41■□□□□ 0.38
NME3-205ENST00000563854 ZNF547Q8IVP9 402 aa17.41■□□□□ 0.38
NME3-205ENST00000563854 AVL9Q8NBF6 648 aa17.41■□□□□ 0.38
NME3-205ENST00000563854 SGF29Q96ES7 293 aa17.41■□□□□ 0.38
NME3-205ENST00000563854 CTRCQ99895 268 aa17.41■□□□□ 0.38
NME3-205ENST00000563854 APOL2Q9BQE5 337 aa17.41■□□□□ 0.38
NME3-205ENST00000563854 TIMM29Q9BSF4 260 aa17.41■□□□□ 0.38
NME3-205ENST00000563854 OSBPL8Q9BZF1 889 aa17.41■□□□□ 0.38
NME3-205ENST00000563854 SEMA4CQ9C0C4 833 aa17.41■□□□□ 0.38
NME3-205ENST00000563854 UGT1A7Q9HAW7 530 aa17.41■□□□□ 0.38
NME3-205ENST00000563854 UGT1A10Q9HAW8 530 aa17.41■□□□□ 0.38
NME3-205ENST00000563854 UGT1A8Q9HAW9 530 aa17.41■□□□□ 0.38
NME3-205ENST00000563854 REXO2Q9Y3B8 237 aaKnown RBP17.41■□□□□ 0.38
NME3-205ENST00000563854 PCDHA3Q9Y5H8 950 aa17.41■□□□□ 0.38
NME3-205ENST00000563854 KALRNO60229 2985 aa17.4■□□□□ 0.38
NME3-205ENST00000563854 CCDC66A2RUB6 948 aa17.4■□□□□ 0.38
NME3-205ENST00000563854 OR52A4PA6NMU1 304 aa17.4■□□□□ 0.38
NME3-205ENST00000563854 KCNN4O15554 427 aa17.4■□□□□ 0.38
NME3-205ENST00000563854 STK10O94804 968 aaKnown RBP17.4■□□□□ 0.38
NME3-205ENST00000563854 VCLP18206 1134 aa17.4■□□□□ 0.38
NME3-205ENST00000563854 PSMB4P28070 264 aa17.4■□□□□ 0.38
NME3-205ENST00000563854 PBLDP30039 288 aaPredicted RBP17.4■□□□□ 0.38
NME3-205ENST00000563854 CETN2P41208 172 aa17.4■□□□□ 0.38
NME3-205ENST00000563854 ARSDP51689 593 aa17.4■□□□□ 0.38
NME3-205ENST00000563854 RWDD2BP57060 319 aa17.4■□□□□ 0.38
NME3-205ENST00000563854 OLIG2Q13516 323 aa17.4■□□□□ 0.38
NME3-205ENST00000563854 PTPRCAPQ14761 206 aa17.4■□□□□ 0.38
NME3-205ENST00000563854 DCAF12Q5T6F0 453 aa17.4■□□□□ 0.38
NME3-205ENST00000563854 ZDHHC20Q5W0Z9 365 aa17.4■□□□□ 0.38
NME3-205ENST00000563854 DTX1Q86Y01 620 aa17.4■□□□□ 0.38
NME3-205ENST00000563854 IL22RA1Q8N6P7 574 aa17.4■□□□□ 0.38
NME3-205ENST00000563854 ZSCAN1Q8NBB4 408 aa17.4■□□□□ 0.38
NME3-205ENST00000563854 CXorf40BQ96DE9 158 aa17.4■□□□□ 0.38
NME3-205ENST00000563854 DDA1Q9BW61 102 aa17.4■□□□□ 0.38
NME3-205ENST00000563854 ZCCHC2Q9C0B9 1178 aaKnown RBP17.4■□□□□ 0.38
NME3-205ENST00000563854 LACRTQ9GZZ8 138 aa17.4■□□□□ 0.38
NME3-205ENST00000563854 IL17CQ9P0M4 197 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms