RNA–Protein interactions for RNA: ENST00000563759.1

LINC01960-201, Transcript of long intergenic non-protein coding RNA 1960, humanhuman

BASIC

Gene LINC01960, Length 1,884 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01960-201ENST00000563759 ADPRHP54922 357 aa21.71■■□□□ 1.07
LINC01960-201ENST00000563759 B4GALNT1Q00973 533 aa21.71■■□□□ 1.07
LINC01960-201ENST00000563759 DPTQ07507 201 aa21.71■■□□□ 1.07
LINC01960-201ENST00000563759 SFSWAPQ12872 951 aaKnown RBP21.71■■□□□ 1.07
LINC01960-201ENST00000563759 LDLRAP1Q5SW96 308 aa21.71■■□□□ 1.07
LINC01960-201ENST00000563759 USP30Q70CQ3 517 aa21.71■■□□□ 1.07
LINC01960-201ENST00000563759 SYNPOQ8N3V7 929 aa21.71■■□□□ 1.07
LINC01960-201ENST00000563759 CD200R1Q8TD46 325 aa21.71■■□□□ 1.07
LINC01960-201ENST00000563759 FAM131CQ96AQ9 280 aa21.71■■□□□ 1.07
LINC01960-201ENST00000563759 GPR78Q96P69 363 aa21.71■■□□□ 1.07
LINC01960-201ENST00000563759 LMAN1LQ9HAT1 526 aa21.71■■□□□ 1.07
LINC01960-201ENST00000563759 KCTD5Q9NXV2 234 aa21.71■■□□□ 1.07
LINC01960-201ENST00000563759 COPG2Q9UBF2 871 aa21.71■■□□□ 1.07
LINC01960-201ENST00000563759 XPR1Q9UBH6 696 aa21.71■■□□□ 1.07
LINC01960-201ENST00000563759 FZD4Q9ULV1 537 aa21.71■■□□□ 1.07
LINC01960-201ENST00000563759 SRRM3A6NNA2 597 aaPredicted RBP21.7■■□□□ 1.06
LINC01960-201ENST00000563759 BIRC5O15392 142 aa21.7■■□□□ 1.06
LINC01960-201ENST00000563759 TRIM16O95361 564 aa21.7■■□□□ 1.06
LINC01960-201ENST00000563759 BPGMP07738 259 aa21.7■■□□□ 1.06
LINC01960-201ENST00000563759 ITGB6P18564 788 aa21.7■■□□□ 1.06
LINC01960-201ENST00000563759 MSH3P20585 1137 aa21.7■■□□□ 1.06
LINC01960-201ENST00000563759 PCLAFQ15004 111 aa21.7■■□□□ 1.06
LINC01960-201ENST00000563759 SEL1L3Q68CR1 1132 aa21.7■■□□□ 1.06
LINC01960-201ENST00000563759 DET1Q7L5Y6 550 aa21.7■■□□□ 1.06
LINC01960-201ENST00000563759 FAM124AQ86V42 546 aa21.7■■□□□ 1.06
LINC01960-201ENST00000563759 NUDCD3Q8IVD9 361 aa21.7■■□□□ 1.06
LINC01960-201ENST00000563759 SIX5Q8N196 739 aa21.7■■□□□ 1.06
LINC01960-201ENST00000563759 GIMAP7Q8NHV1 300 aa21.7■■□□□ 1.06
LINC01960-201ENST00000563759 HMGB4Q8WW32 186 aa21.7■■□□□ 1.06
LINC01960-201ENST00000563759 MRPL46Q9H2W6 279 aaKnown RBP21.7■■□□□ 1.06
LINC01960-201ENST00000563759 POLMQ9NP87 494 aaPredicted RBP21.7■■□□□ 1.06
LINC01960-201ENST00000563759 LTB4R2Q9NPC1 389 aa21.7■■□□□ 1.06
LINC01960-201ENST00000563759 GALPQ9UBC7 116 aa21.7■■□□□ 1.06
LINC01960-201ENST00000563759 K7ESM1 405 aa21.69■■□□□ 1.06
LINC01960-201ENST00000563759 SOD1P00441 154 aa21.69■■□□□ 1.06
LINC01960-201ENST00000563759 OR56A5P0C7T3 313 aa21.69■■□□□ 1.06
LINC01960-201ENST00000563759 ATP1B2P14415 290 aaPredicted RBP21.69■■□□□ 1.06
LINC01960-201ENST00000563759 CPA3P15088 417 aa21.69■■□□□ 1.06
LINC01960-201ENST00000563759 CLCN7P51798 805 aa21.69■■□□□ 1.06
LINC01960-201ENST00000563759 PELI3Q8N2H9 469 aa21.69■■□□□ 1.06
LINC01960-201ENST00000563759 ZNF317Q96PQ6 595 aaPredicted RBP21.69■■□□□ 1.06
LINC01960-201ENST00000563759 PANX3Q96QZ0 392 aa21.69■■□□□ 1.06
LINC01960-201ENST00000563759 SLC30A3Q99726 388 aa21.69■■□□□ 1.06
LINC01960-201ENST00000563759 MRPL57Q9BQC6 102 aaKnown RBP21.69■■□□□ 1.06
LINC01960-201ENST00000563759 KANSL1LA0AUZ9 987 aa21.69■■□□□ 1.06
LINC01960-201ENST00000563759 GABRG2P18507 467 aa21.69■■□□□ 1.06
LINC01960-201ENST00000563759 TAC1P20366 129 aa21.69■■□□□ 1.06
LINC01960-201ENST00000563759 BGNP21810 368 aa21.69■■□□□ 1.06
LINC01960-201ENST00000563759 KCNA4P22459 653 aa21.69■■□□□ 1.06
LINC01960-201ENST00000563759 STARD6P59095 220 aa21.69■■□□□ 1.06
LINC01960-201ENST00000563759 RPS21P63220 83 aaKnown RBP21.69■■□□□ 1.06
LINC01960-201ENST00000563759 ACAP2Q15057 778 aa21.69■■□□□ 1.06
LINC01960-201ENST00000563759 KIAA1161Q6NSJ0 714 aa21.69■■□□□ 1.06
LINC01960-201ENST00000563759 TRIM42Q8IWZ5 723 aa21.69■■□□□ 1.06
LINC01960-201ENST00000563759 ZNF687Q8N1G0 1237 aa21.69■■□□□ 1.06
LINC01960-201ENST00000563759 NKAPQ8N5F7 415 aaKnown RBP21.69■■□□□ 1.06
LINC01960-201ENST00000563759 PPP1R14CQ8TAE6 165 aa21.69■■□□□ 1.06
LINC01960-201ENST00000563759 RDH11Q8TC12 318 aa21.69■■□□□ 1.06
LINC01960-201ENST00000563759 LKAAEAR1Q8TD35 194 aa21.69■■□□□ 1.06
LINC01960-201ENST00000563759 ZNF75CPQ92670 426 aaPredicted RBP21.69■■□□□ 1.06
LINC01960-201ENST00000563759 MANSC1Q9H8J5 431 aa21.69■■□□□ 1.06
LINC01960-201ENST00000563759 C19orf67A6NJJ6 358 aa21.68■■□□□ 1.06
LINC01960-201ENST00000563759 MYL2P10916 166 aa21.68■■□□□ 1.06
LINC01960-201ENST00000563759 TFEBP19484 476 aa21.68■■□□□ 1.06
LINC01960-201ENST00000563759 DGKEP52429 567 aa21.68■■□□□ 1.06
LINC01960-201ENST00000563759 IL2P60568 153 aa21.68■■□□□ 1.06
LINC01960-201ENST00000563759 RGS9BPQ6ZS82 235 aa21.68■■□□□ 1.06
LINC01960-201ENST00000563759 SYT13Q7L8C5 426 aa21.68■■□□□ 1.06
LINC01960-201ENST00000563759 CPNE9Q8IYJ1 553 aa21.68■■□□□ 1.06
LINC01960-201ENST00000563759 PGBD3Q8N328 593 aa21.68■■□□□ 1.06
LINC01960-201ENST00000563759 OSBPL6Q9BZF3 934 aa21.68■■□□□ 1.06
LINC01960-201ENST00000563759 FOXQ1Q9C009 403 aa21.68■■□□□ 1.06
LINC01960-201ENST00000563759 PREBQ9HCU5 417 aa21.68■■□□□ 1.06
LINC01960-201ENST00000563759 SIRPGQ9P1W8 387 aa21.68■■□□□ 1.06
LINC01960-201ENST00000563759 TBC1D3DA0A087WVF3 549 aa21.67■■□□□ 1.06
LINC01960-201ENST00000563759 TBC1D3IA0A087WXS9 549 aa21.67■■□□□ 1.06
LINC01960-201ENST00000563759 TBC1D3EA0A087X179 549 aa21.67■■□□□ 1.06
LINC01960-201ENST00000563759 TBC1D3KA0A087X1G2 549 aa21.67■■□□□ 1.06
LINC01960-201ENST00000563759 TBC1D3FA6NER0 549 aaPredicted RBP21.67■■□□□ 1.06
LINC01960-201ENST00000563759 FAM170BA6NMN3 283 aa21.67■■□□□ 1.06
LINC01960-201ENST00000563759 CHURC1-FNTBB4DL54 471 aa21.67■■□□□ 1.06
LINC01960-201ENST00000563759 TBC1D3LB9A6J9 549 aa21.67■■□□□ 1.06
LINC01960-201ENST00000563759 PCCBP05166 539 aa21.67■■□□□ 1.06
LINC01960-201ENST00000563759 RBP1P09455 135 aa21.67■■□□□ 1.06
LINC01960-201ENST00000563759 TBC1D3HP0C7X1 549 aa21.67■■□□□ 1.06
LINC01960-201ENST00000563759 CD1DP15813 335 aa21.67■■□□□ 1.06
LINC01960-201ENST00000563759 ALDH3A1P30838 453 aa21.67■■□□□ 1.06
LINC01960-201ENST00000563759 CHI3L2Q15782 390 aa21.67■■□□□ 1.06
LINC01960-201ENST00000563759 KHDC1Q4VXA5 237 aaKnown RBP21.67■■□□□ 1.06
LINC01960-201ENST00000563759 TECRLQ5HYJ1 363 aa21.67■■□□□ 1.06
LINC01960-201ENST00000563759 ZNF648Q5T619 568 aaPredicted RBP21.67■■□□□ 1.06
LINC01960-201ENST00000563759 TBC1D3GQ6DHY5 549 aa21.67■■□□□ 1.06
LINC01960-201ENST00000563759 TBC1D3CQ6IPX1 549 aa21.67■■□□□ 1.06
LINC01960-201ENST00000563759 OTOAQ7RTW8 1153 aa21.67■■□□□ 1.06
LINC01960-201ENST00000563759 NLRP8Q86W28 1048 aa21.67■■□□□ 1.06
LINC01960-201ENST00000563759 LRRC34Q8IZ02 419 aa21.67■■□□□ 1.06
LINC01960-201ENST00000563759 TBC1D3Q8IZP1 549 aaPredicted RBP21.67■■□□□ 1.06
LINC01960-201ENST00000563759 SREK1Q8WXA9 508 aaKnown RBP21.67■■□□□ 1.06
LINC01960-201ENST00000563759 ZCCHC2Q9C0B9 1178 aaKnown RBP21.67■■□□□ 1.06
LINC01960-201ENST00000563759 NSRP1Q9H0G5 558 aaKnown RBP21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms