RNA–Protein interactions for RNA: ENST00000563643.1

E4F1-203, Transcript of E4F transcription factor 1, humanhuman

TSL 3

Gene E4F1, Length 793 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
E4F1-203ENST00000563643 OR2M4Q96R27 311 aa17.88■□□□□ 0.45
E4F1-203ENST00000563643 GPR87Q9BY21 358 aa17.88■□□□□ 0.45
E4F1-203ENST00000563643 LRRC19Q9H756 370 aa17.88■□□□□ 0.45
E4F1-203ENST00000563643 PCDH18Q9HCL0 1135 aa17.88■□□□□ 0.45
E4F1-203ENST00000563643 PCDHA13Q9Y5I0 950 aa17.88■□□□□ 0.45
E4F1-203ENST00000563643 EPN1Q9Y6I3 576 aaPredicted RBP17.88■□□□□ 0.45
E4F1-203ENST00000563643 PCSK5Q92824 1860 aa17.88■□□□□ 0.45
E4F1-203ENST00000563643 SPAG6O75602 509 aa17.87■□□□□ 0.45
E4F1-203ENST00000563643 EML2O95834 649 aa17.87■□□□□ 0.45
E4F1-203ENST00000563643 GFERP55789 205 aa17.87■□□□□ 0.45
E4F1-203ENST00000563643 MESDQ14696 234 aa17.87■□□□□ 0.45
E4F1-203ENST00000563643 DOK6Q6PKX4 331 aa17.87■□□□□ 0.45
E4F1-203ENST00000563643 DPPA4Q7L190 304 aa17.87■□□□□ 0.45
E4F1-203ENST00000563643 POLNQ7Z5Q5 900 aa17.87■□□□□ 0.45
E4F1-203ENST00000563643 CPNE8Q86YQ8 564 aa17.87■□□□□ 0.45
E4F1-203ENST00000563643 PLXDC1Q8IUK5 500 aa17.87■□□□□ 0.45
E4F1-203ENST00000563643 SPC24Q8NBT2 197 aa17.87■□□□□ 0.45
E4F1-203ENST00000563643 FAM71BQ8TC56 605 aa17.87■□□□□ 0.45
E4F1-203ENST00000563643 UBE2Q2Q8WVN8 375 aa17.87■□□□□ 0.45
E4F1-203ENST00000563643 CSPG4P5Q96PW8 444 aa17.87■□□□□ 0.45
E4F1-203ENST00000563643 KLC2Q9H0B6 622 aa17.87■□□□□ 0.45
E4F1-203ENST00000563643 STN1Q9H668 368 aaKnown RBP17.87■□□□□ 0.45
E4F1-203ENST00000563643 SARS2Q9NP81 518 aaKnown RBP17.87■□□□□ 0.45
E4F1-203ENST00000563643 A8MX80 341 aa17.86■□□□□ 0.45
E4F1-203ENST00000563643 FGF5P12034 268 aa17.86■□□□□ 0.45
E4F1-203ENST00000563643 HOXB4P17483 251 aaPredicted RBP17.86■□□□□ 0.45
E4F1-203ENST00000563643 SEPHS1P49903 392 aa17.86■□□□□ 0.45
E4F1-203ENST00000563643 HADHBP55084 474 aaKnown RBP17.86■□□□□ 0.45
E4F1-203ENST00000563643 TAS2R40P59535 323 aa17.86■□□□□ 0.45
E4F1-203ENST00000563643 LAMB3Q13751 1172 aa17.86■□□□□ 0.45
E4F1-203ENST00000563643 CYTH1Q15438 398 aa17.86■□□□□ 0.45
E4F1-203ENST00000563643 LZTR1Q8N653 840 aa17.86■□□□□ 0.45
E4F1-203ENST00000563643 ST6GALNAC3Q8NDV1 305 aa17.86■□□□□ 0.45
E4F1-203ENST00000563643 SH3KBP1Q96B97 665 aa17.86■□□□□ 0.45
E4F1-203ENST00000563643 C9orf72Q96LT7 481 aa17.86■□□□□ 0.45
E4F1-203ENST00000563643 COQ10AQ96MF6 247 aa17.86■□□□□ 0.45
E4F1-203ENST00000563643 TUBGCP5Q96RT8 1024 aa17.86■□□□□ 0.45
E4F1-203ENST00000563643 BARD1Q99728 777 aaKnown RBP17.86■□□□□ 0.45
E4F1-203ENST00000563643 BAG1Q99933 345 aaPredicted RBP17.86■□□□□ 0.45
E4F1-203ENST00000563643 EPB41L1Q9H4G0 881 aa17.86■□□□□ 0.45
E4F1-203ENST00000563643 GPR83Q9NYM4 423 aa17.86■□□□□ 0.45
E4F1-203ENST00000563643 B3GNT3Q9Y2A9 372 aa17.86■□□□□ 0.45
E4F1-203ENST00000563643 COPG1Q9Y678 874 aaKnown RBP17.86■□□□□ 0.45
E4F1-203ENST00000563643 A0A0A6YYK5 440 aaPredicted RBP17.85■□□□□ 0.45
E4F1-203ENST00000563643 ARHGAP42A6NI28 874 aa17.85■□□□□ 0.45
E4F1-203ENST00000563643 A6NL46 340 aa17.85■□□□□ 0.45
E4F1-203ENST00000563643 GOLGA6L6A8MZA4 724 aa17.85■□□□□ 0.45
E4F1-203ENST00000563643 IPO7O95373 1038 aaKnown RBP17.85■□□□□ 0.45
E4F1-203ENST00000563643 ARSEP51690 589 aa17.85■□□□□ 0.45
E4F1-203ENST00000563643 CDH6P55285 790 aa17.85■□□□□ 0.45
E4F1-203ENST00000563643 KRT81Q14533 505 aa17.85■□□□□ 0.45
E4F1-203ENST00000563643 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.85■□□□□ 0.45
E4F1-203ENST00000563643 FAM199XQ6PEV8 388 aaPredicted RBP17.85■□□□□ 0.45
E4F1-203ENST00000563643 RAD9BQ6WBX8 426 aa17.85■□□□□ 0.45
E4F1-203ENST00000563643 PPP1R3BQ86XI6 285 aa17.85■□□□□ 0.45
E4F1-203ENST00000563643 TMEM139Q8IV31 216 aa17.85■□□□□ 0.45
E4F1-203ENST00000563643 MMP21Q8N119 569 aa17.85■□□□□ 0.45
E4F1-203ENST00000563643 NPWQ8N729 165 aa17.85■□□□□ 0.45
E4F1-203ENST00000563643 SCARF2Q96GP6 870 aaPredicted RBP17.85■□□□□ 0.45
E4F1-203ENST00000563643 CELF6Q96J87 481 aaKnown RBP17.85■□□□□ 0.45
E4F1-203ENST00000563643 SMAD5Q99717 465 aaKnown RBP17.85■□□□□ 0.45
E4F1-203ENST00000563643 TBC1D10AQ9BXI6 508 aa17.85■□□□□ 0.45
E4F1-203ENST00000563643 SLC39A8Q9C0K1 460 aa17.85■□□□□ 0.45
E4F1-203ENST00000563643 AKIRIN1Q9H9L7 192 aaPredicted RBP17.85■□□□□ 0.45
E4F1-203ENST00000563643 ZNF185O15231 689 aa17.84■□□□□ 0.45
E4F1-203ENST00000563643 TIAF1O95411 115 aa17.84■□□□□ 0.45
E4F1-203ENST00000563643 C9P02748 559 aa17.84■□□□□ 0.45
E4F1-203ENST00000563643 LPOP22079 712 aaPredicted RBP17.84■□□□□ 0.45
E4F1-203ENST00000563643 AMPD1P23109 780 aa17.84■□□□□ 0.45
E4F1-203ENST00000563643 SERPINA4P29622 427 aa17.84■□□□□ 0.45
E4F1-203ENST00000563643 GJC1P36383 396 aa17.84■□□□□ 0.45
E4F1-203ENST00000563643 SLC1A1P43005 524 aa17.84■□□□□ 0.45
E4F1-203ENST00000563643 RPS15P62841 145 aaKnown RBP17.84■□□□□ 0.45
E4F1-203ENST00000563643 PDK2Q15119 407 aa17.84■□□□□ 0.45
E4F1-203ENST00000563643 TMCO3Q6UWJ1 677 aa17.84■□□□□ 0.45
E4F1-203ENST00000563643 ARHGAP12Q8IWW6 846 aa17.84■□□□□ 0.45
E4F1-203ENST00000563643 ECHDC3Q96DC8 303 aa17.84■□□□□ 0.45
E4F1-203ENST00000563643 ATP13A3Q9H7F0 1226 aa17.84■□□□□ 0.45
E4F1-203ENST00000563643 COPG2Q9UBF2 871 aa17.84■□□□□ 0.45
E4F1-203ENST00000563643 OSGIN2Q9Y236 505 aa17.84■□□□□ 0.45
E4F1-203ENST00000563643 NTNG1Q9Y2I2 539 aa17.84■□□□□ 0.45
E4F1-203ENST00000563643 GOLGA6CA6NDK9 693 aa17.83■□□□□ 0.44
E4F1-203ENST00000563643 GOLGA6BA6NDN3 693 aa17.83■□□□□ 0.44
E4F1-203ENST00000563643 PRAMEF11O60813 436 aa17.83■□□□□ 0.44
E4F1-203ENST00000563643 TMEM63AO94886 807 aa17.83■□□□□ 0.44
E4F1-203ENST00000563643 GOLGA6DP0CG33 693 aa17.83■□□□□ 0.44
E4F1-203ENST00000563643 IL4RP24394 825 aa17.83■□□□□ 0.44
E4F1-203ENST00000563643 PAPOLAP51003 745 aaKnown RBP17.83■□□□□ 0.44
E4F1-203ENST00000563643 LRP8Q14114 963 aa17.83■□□□□ 0.44
E4F1-203ENST00000563643 DPYSL3Q14195 570 aa17.83■□□□□ 0.44
E4F1-203ENST00000563643 ATP13A4Q4VNC1 1196 aa17.83■□□□□ 0.44
E4F1-203ENST00000563643 PYCR3Q53H96 274 aa17.83■□□□□ 0.44
E4F1-203ENST00000563643 CRB2Q5IJ48 1285 aa17.83■□□□□ 0.44
E4F1-203ENST00000563643 LRRC38Q5VT99 294 aa17.83■□□□□ 0.44
E4F1-203ENST00000563643 RAET1GQ6H3X3 334 aa17.83■□□□□ 0.44
E4F1-203ENST00000563643 MAP7D3Q8IWC1 876 aa17.83■□□□□ 0.44
E4F1-203ENST00000563643 PAF1Q8N7H5 531 aa17.83■□□□□ 0.44
E4F1-203ENST00000563643 KCTD6Q8NC69 237 aa17.83■□□□□ 0.44
E4F1-203ENST00000563643 ZNF670Q9BS34 389 aa17.83■□□□□ 0.44
E4F1-203ENST00000563643 LDHAL6BQ9BYZ2 381 aaPredicted RBP17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms