RNA–Protein interactions for RNA: ENST00000563485.2

HMGB1P33-201, Transcript of high mobility group box 1 pseudogene 33, humanhuman

BASIC

Gene HMGB1P33, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P33-201ENST00000563485 ZUFSPQ96AP4 578 aa3.04□□□□□ -1.92
HMGB1P33-201ENST00000563485 INTS12Q96CB8 462 aaKnown RBP3.04□□□□□ -1.92
HMGB1P33-201ENST00000563485 RRP36Q96EU6 259 aaKnown RBP3.04□□□□□ -1.92
HMGB1P33-201ENST00000563485 ART5Q96L15 291 aa3.04□□□□□ -1.92
HMGB1P33-201ENST00000563485 RAB6CQ9H0N0 254 aa3.04□□□□□ -1.92
HMGB1P33-201ENST00000563485 SIL1Q9H173 461 aa3.04□□□□□ -1.92
HMGB1P33-201ENST00000563485 RANBP17Q9H2T7 1088 aaKnown RBP3.04□□□□□ -1.92
HMGB1P33-201ENST00000563485 ZBTB20Q9HC78 741 aaPredicted RBP3.04□□□□□ -1.92
HMGB1P33-201ENST00000563485 TAS2R10Q9NYW0 307 aa3.04□□□□□ -1.92
HMGB1P33-201ENST00000563485 SLC13A4Q9UKG4 626 aa3.04□□□□□ -1.92
HMGB1P33-201ENST00000563485 A0A087X002 238 aa3.03□□□□□ -1.92
HMGB1P33-201ENST00000563485 A0A1W2PQF6 199 aa3.03□□□□□ -1.92
HMGB1P33-201ENST00000563485 CLIC2O15247 247 aa3.03□□□□□ -1.92
HMGB1P33-201ENST00000563485 BUD23O43709 281 aaKnown RBP3.03□□□□□ -1.92
HMGB1P33-201ENST00000563485 SEC14L2O76054 403 aa3.03□□□□□ -1.92
HMGB1P33-201ENST00000563485 TFAP2AP05549 437 aa3.03□□□□□ -1.92
HMGB1P33-201ENST00000563485 UBL4AP11441 157 aa3.03□□□□□ -1.92
HMGB1P33-201ENST00000563485 ZNF26P17031 533 aaPredicted RBP3.03□□□□□ -1.92
HMGB1P33-201ENST00000563485 PBX3P40426 434 aa3.03□□□□□ -1.92
HMGB1P33-201ENST00000563485 PRCPP42785 496 aa3.03□□□□□ -1.92
HMGB1P33-201ENST00000563485 IRX1P78414 480 aaPredicted RBP3.03□□□□□ -1.92
HMGB1P33-201ENST00000563485 DHX8Q14562 1220 aaKnown RBP3.03□□□□□ -1.92
HMGB1P33-201ENST00000563485 TMEM187Q14656 261 aa3.03□□□□□ -1.92
HMGB1P33-201ENST00000563485 LPAL2Q16609 132 aa3.03□□□□□ -1.92
HMGB1P33-201ENST00000563485 ACAD10Q6JQN1 1059 aa3.03□□□□□ -1.92
HMGB1P33-201ENST00000563485 PACS1Q6VY07 963 aa3.03□□□□□ -1.92
HMGB1P33-201ENST00000563485 CPXCR1Q8N123 301 aa3.03□□□□□ -1.92
HMGB1P33-201ENST00000563485 RASGEF1CQ8N431 466 aa3.03□□□□□ -1.92
HMGB1P33-201ENST00000563485 SPEM1Q8N4L4 309 aa3.03□□□□□ -1.92
HMGB1P33-201ENST00000563485 MYRIPQ8NFW9 859 aa3.03□□□□□ -1.92
HMGB1P33-201ENST00000563485 RDM1Q8NG50 284 aa3.03□□□□□ -1.92
HMGB1P33-201ENST00000563485 METTL6Q8TCB7 284 aa3.03□□□□□ -1.92
HMGB1P33-201ENST00000563485 HCAR2Q8TDS4 363 aa3.03□□□□□ -1.92
HMGB1P33-201ENST00000563485 SMARCE1Q969G3 411 aa3.03□□□□□ -1.92
HMGB1P33-201ENST00000563485 EGLN2Q96KS0 407 aa3.03□□□□□ -1.92
HMGB1P33-201ENST00000563485 PRMT6Q96LA8 375 aaPredicted RBP3.03□□□□□ -1.92
HMGB1P33-201ENST00000563485 SEMA3CQ99985 751 aa3.03□□□□□ -1.92
HMGB1P33-201ENST00000563485 SLX1AQ9BQ83 275 aa3.03□□□□□ -1.92
HMGB1P33-201ENST00000563485 RAD21L1Q9H4I0 556 aa3.03□□□□□ -1.92
HMGB1P33-201ENST00000563485 MAGIXQ9H6Y5 334 aa3.03□□□□□ -1.92
HMGB1P33-201ENST00000563485 APOBEC3GQ9HC16 384 aaKnown RBP3.03□□□□□ -1.92
HMGB1P33-201ENST00000563485 RANGRFQ9HD47 186 aaPredicted RBP3.03□□□□□ -1.92
HMGB1P33-201ENST00000563485 SLC38A7Q9NVC3 462 aa3.03□□□□□ -1.92
HMGB1P33-201ENST00000563485 COL2A1P02458 1487 aaPredicted RBP3.03□□□□□ -1.93
HMGB1P33-201ENST00000563485 KANSL1LA0AUZ9 987 aa3.02□□□□□ -1.93
HMGB1P33-201ENST00000563485 A6NL46 340 aa3.02□□□□□ -1.93
HMGB1P33-201ENST00000563485 KRTAP16-1A8MUX0 517 aa3.02□□□□□ -1.93
HMGB1P33-201ENST00000563485 H0YIN7 160 aa3.02□□□□□ -1.93
HMGB1P33-201ENST00000563485 PSMD14O00487 310 aa3.02□□□□□ -1.93
HMGB1P33-201ENST00000563485 LIPFP07098 398 aa3.02□□□□□ -1.93
HMGB1P33-201ENST00000563485 IGHV4-38-2P0DP08 117 aa3.02□□□□□ -1.93
HMGB1P33-201ENST00000563485 GNAZP19086 355 aa3.02□□□□□ -1.93
HMGB1P33-201ENST00000563485 HOXA13P31271 388 aaPredicted RBP3.02□□□□□ -1.93
HMGB1P33-201ENST00000563485 CLK1P49759 484 aaKnown RBP3.02□□□□□ -1.93
HMGB1P33-201ENST00000563485 LUMP51884 338 aaPredicted RBP3.02□□□□□ -1.93
HMGB1P33-201ENST00000563485 CSTF3Q12996 717 aaKnown RBP3.02□□□□□ -1.93
HMGB1P33-201ENST00000563485 CCNG2Q16589 344 aa3.02□□□□□ -1.93
HMGB1P33-201ENST00000563485 ZFP69Q49AA0 526 aa3.02□□□□□ -1.93
HMGB1P33-201ENST00000563485 LRIF1Q5T3J3 769 aa3.02□□□□□ -1.93
HMGB1P33-201ENST00000563485 MFSD6Q6ZSS7 791 aa3.02□□□□□ -1.93
HMGB1P33-201ENST00000563485 SEPT14Q6ZU15 432 aa3.02□□□□□ -1.93
HMGB1P33-201ENST00000563485 SLC5A8Q8N695 610 aa3.02□□□□□ -1.93
HMGB1P33-201ENST00000563485 EMC1Q8N766 993 aa3.02□□□□□ -1.93
HMGB1P33-201ENST00000563485 SLC38A9Q8NBW4 561 aa3.02□□□□□ -1.93
HMGB1P33-201ENST00000563485 PPP4R1Q8TF05 950 aa3.02□□□□□ -1.93
HMGB1P33-201ENST00000563485 FAM149B1Q96BN6 582 aa3.02□□□□□ -1.93
HMGB1P33-201ENST00000563485 MAP7D2Q96T17 732 aa3.02□□□□□ -1.93
HMGB1P33-201ENST00000563485 INTS10Q9NVR2 710 aaKnown RBP3.02□□□□□ -1.93
HMGB1P33-201ENST00000563485 C2orf42Q9NWW7 574 aa3.02□□□□□ -1.93
HMGB1P33-201ENST00000563485 PTTG2Q9NZH5 202 aa3.02□□□□□ -1.93
HMGB1P33-201ENST00000563485 OGFRQ9NZT2 677 aa3.02□□□□□ -1.93
HMGB1P33-201ENST00000563485 CWC15Q9P013 229 aaKnown RBP3.02□□□□□ -1.93
HMGB1P33-201ENST00000563485 UBA2Q9UBT2 640 aaPredicted RBP3.02□□□□□ -1.93
HMGB1P33-201ENST00000563485 DNAJB4Q9UDY4 337 aa3.02□□□□□ -1.93
HMGB1P33-201ENST00000563485 CACNG5Q9UF02 275 aa3.02□□□□□ -1.93
HMGB1P33-201ENST00000563485 B3GALT5Q9Y2C3 310 aa3.02□□□□□ -1.93
HMGB1P33-201ENST00000563485 CRYL1Q9Y2S2 319 aa3.02□□□□□ -1.93
HMGB1P33-201ENST00000563485 FLT1P17948 1338 aa3.01□□□□□ -1.93
HMGB1P33-201ENST00000563485 A6NLC8 198 aa3.01□□□□□ -1.93
HMGB1P33-201ENST00000563485 H3BQ06 376 aaPredicted RBP3.01□□□□□ -1.93
HMGB1P33-201ENST00000563485 SLC22A2O15244 555 aa3.01□□□□□ -1.93
HMGB1P33-201ENST00000563485 PLPP2O43688 288 aa3.01□□□□□ -1.93
HMGB1P33-201ENST00000563485 SLC25A12O75746 678 aa3.01□□□□□ -1.93
HMGB1P33-201ENST00000563485 RGS2P41220 211 aa3.01□□□□□ -1.93
HMGB1P33-201ENST00000563485 CD81P60033 236 aa3.01□□□□□ -1.93
HMGB1P33-201ENST00000563485 RPL7AP62424 266 aaKnown RBP3.01□□□□□ -1.93
HMGB1P33-201ENST00000563485 MRPS34P82930 218 aaKnown RBP3.01□□□□□ -1.93
HMGB1P33-201ENST00000563485 ZBED6P86452 979 aa3.01□□□□□ -1.93
HMGB1P33-201ENST00000563485 ITGA9Q13797 1035 aa3.01□□□□□ -1.93
HMGB1P33-201ENST00000563485 SLC1A5Q15758 541 aa3.01□□□□□ -1.93
HMGB1P33-201ENST00000563485 DUOXA1Q1HG43 343 aa3.01□□□□□ -1.93
HMGB1P33-201ENST00000563485 KIAA1644Q3SXP7 199 aa3.01□□□□□ -1.93
HMGB1P33-201ENST00000563485 ASPRV1Q53RT3 343 aa3.01□□□□□ -1.93
HMGB1P33-201ENST00000563485 SH2D5Q6ZV89 423 aa3.01□□□□□ -1.93
HMGB1P33-201ENST00000563485 CCDC190Q86UF4 302 aa3.01□□□□□ -1.93
HMGB1P33-201ENST00000563485 C1orf52Q8N6N3 182 aaKnown RBP3.01□□□□□ -1.93
HMGB1P33-201ENST00000563485 PAF1Q8N7H5 531 aa3.01□□□□□ -1.93
HMGB1P33-201ENST00000563485 TMEM116Q8NCL8 245 aa3.01□□□□□ -1.93
HMGB1P33-201ENST00000563485 ZNF653Q96CK0 615 aa3.01□□□□□ -1.93
HMGB1P33-201ENST00000563485 PERPQ96FX8 193 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms