RNA–Protein interactions for RNA: ENST00000563366.5

UBFD1-202, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 3

Gene UBFD1, Length 709 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-202ENST00000563366 SEMA3AQ14563 771 aa9.62□□□□□ -0.87
UBFD1-202ENST00000563366 GRIN2CQ14957 1233 aa9.62□□□□□ -0.87
UBFD1-202ENST00000563366 CHI3L2Q15782 390 aa9.62□□□□□ -0.87
UBFD1-202ENST00000563366 ZNF789Q5FWF6 425 aa9.62□□□□□ -0.87
UBFD1-202ENST00000563366 LIPMQ5VYY2 423 aa9.62□□□□□ -0.87
UBFD1-202ENST00000563366 PSAPL1Q6NUJ1 521 aa9.62□□□□□ -0.87
UBFD1-202ENST00000563366 FBXL19Q6PCT2 694 aa9.62□□□□□ -0.87
UBFD1-202ENST00000563366 FAM151BQ6UXP7 276 aa9.62□□□□□ -0.87
UBFD1-202ENST00000563366 ZYG11AQ6WRX3 759 aa9.62□□□□□ -0.87
UBFD1-202ENST00000563366 FAM47EQ6ZV65 393 aa9.62□□□□□ -0.87
UBFD1-202ENST00000563366 TRMT11Q7Z4G4 463 aaKnown RBP9.62□□□□□ -0.87
UBFD1-202ENST00000563366 TTC7BQ86TV6 843 aa9.62□□□□□ -0.87
UBFD1-202ENST00000563366 RALGPS2Q86X27 583 aaPredicted RBP9.62□□□□□ -0.87
UBFD1-202ENST00000563366 ZSWIM9Q86XI8 627 aa9.62□□□□□ -0.87
UBFD1-202ENST00000563366 CRLF3Q8IUI8 442 aa9.62□□□□□ -0.87
UBFD1-202ENST00000563366 SLC22A9Q8IVM8 553 aa9.62□□□□□ -0.87
UBFD1-202ENST00000563366 CENPLQ8N0S6 344 aaPredicted RBP9.62□□□□□ -0.87
UBFD1-202ENST00000563366 NXPE1Q8N323 547 aa9.62□□□□□ -0.87
UBFD1-202ENST00000563366 FSTL5Q8N475 847 aaPredicted RBP9.62□□□□□ -0.87
UBFD1-202ENST00000563366 GBP7Q8N8V2 638 aaPredicted RBP9.62□□□□□ -0.87
UBFD1-202ENST00000563366 RHEBL1Q8TAI7 183 aa9.62□□□□□ -0.87
UBFD1-202ENST00000563366 PIP4K2CQ8TBX8 421 aa9.62□□□□□ -0.87
UBFD1-202ENST00000563366 HEXDCQ8WVB3 486 aa9.62□□□□□ -0.87
UBFD1-202ENST00000563366 KCTD4Q8WVF5 259 aa9.62□□□□□ -0.87
UBFD1-202ENST00000563366 DNASE1L2Q92874 299 aa9.62□□□□□ -0.87
UBFD1-202ENST00000563366 VOPP1Q96AW1 172 aa9.62□□□□□ -0.87
UBFD1-202ENST00000563366 SEC16BQ96JE7 1060 aa9.62□□□□□ -0.87
UBFD1-202ENST00000563366 OLFM1Q99784 485 aa9.62□□□□□ -0.87
UBFD1-202ENST00000563366 P2RY13Q9BPV8 354 aa9.62□□□□□ -0.87
UBFD1-202ENST00000563366 ELAC2Q9BQ52 826 aaKnown RBP9.62□□□□□ -0.87
UBFD1-202ENST00000563366 ZSCAN5AQ9BUG6 496 aa9.62□□□□□ -0.87
UBFD1-202ENST00000563366 PLA2G2FQ9BZM2 168 aa9.62□□□□□ -0.87
UBFD1-202ENST00000563366 TTYH1Q9H313 450 aaPredicted RBP9.62□□□□□ -0.87
UBFD1-202ENST00000563366 C8orf33Q9H7E9 229 aaPredicted RBP9.62□□□□□ -0.87
UBFD1-202ENST00000563366 IL26Q9NPH9 171 aa9.62□□□□□ -0.87
UBFD1-202ENST00000563366 SMOXQ9NWM0 555 aa9.62□□□□□ -0.87
UBFD1-202ENST00000563366 B4GALT6Q9UBX8 382 aa9.62□□□□□ -0.87
UBFD1-202ENST00000563366 TRMT6Q9UJA5 497 aaKnown RBP9.62□□□□□ -0.87
UBFD1-202ENST00000563366 TMCO1Q9UM00 188 aa9.62□□□□□ -0.87
UBFD1-202ENST00000563366 RUVBL2Q9Y230 463 aaKnown RBP9.62□□□□□ -0.87
UBFD1-202ENST00000563366 ARL2BPQ9Y2Y0 163 aa9.62□□□□□ -0.87
UBFD1-202ENST00000563366 CDH23Q9H251 3354 aa9.61□□□□□ -0.87
UBFD1-202ENST00000563366 SYCE1LA8MT33 242 aa9.61□□□□□ -0.87
UBFD1-202ENST00000563366 KHNYNO15037 678 aaKnown RBP9.61□□□□□ -0.87
UBFD1-202ENST00000563366 TRIM13O60858 407 aa9.61□□□□□ -0.87
UBFD1-202ENST00000563366 DCTN3O75935 186 aa9.61□□□□□ -0.87
UBFD1-202ENST00000563366 EPHX1P07099 455 aa9.61□□□□□ -0.87
UBFD1-202ENST00000563366 THBS1P07996 1170 aa9.61□□□□□ -0.87
UBFD1-202ENST00000563366 ELFN1P0C7U0 828 aa9.61□□□□□ -0.87
UBFD1-202ENST00000563366 GLULP15104 373 aa9.61□□□□□ -0.87
UBFD1-202ENST00000563366 LHCGRP22888 699 aa9.61□□□□□ -0.87
UBFD1-202ENST00000563366 ATP5F1P24539 256 aaPredicted RBP9.61□□□□□ -0.87
UBFD1-202ENST00000563366 ACRV1P26436 265 aa9.61□□□□□ -0.87
UBFD1-202ENST00000563366 SPINT3P49223 89 aa9.61□□□□□ -0.87
UBFD1-202ENST00000563366 CDKN2DP55273 166 aa9.61□□□□□ -0.87
UBFD1-202ENST00000563366 BST1Q10588 318 aa9.61□□□□□ -0.87
UBFD1-202ENST00000563366 ENPP2Q13822 863 aa9.61□□□□□ -0.87
UBFD1-202ENST00000563366 CSHL1Q14406 222 aa9.61□□□□□ -0.87
UBFD1-202ENST00000563366 ZNF284Q2VY69 593 aa9.61□□□□□ -0.87
UBFD1-202ENST00000563366 C9orf64Q5T6V5 341 aa9.61□□□□□ -0.87
UBFD1-202ENST00000563366 PTRHD1Q6GMV3 140 aaKnown RBP9.61□□□□□ -0.87
UBFD1-202ENST00000563366 SDE2Q6IQ49 451 aa9.61□□□□□ -0.87
UBFD1-202ENST00000563366 ZNF549Q6P9A3 640 aa9.61□□□□□ -0.87
UBFD1-202ENST00000563366 OTOAQ7RTW8 1153 aa9.61□□□□□ -0.87
UBFD1-202ENST00000563366 YTHDF3Q7Z739 585 aaKnown RBP9.61□□□□□ -0.87
UBFD1-202ENST00000563366 LDB1Q86U70 411 aaPredicted RBP9.61□□□□□ -0.87
UBFD1-202ENST00000563366 TSPAN33Q86UF1 283 aa9.61□□□□□ -0.87
UBFD1-202ENST00000563366 SERPINA9Q86WD7 417 aa9.61□□□□□ -0.87
UBFD1-202ENST00000563366 WDR75Q8IWA0 830 aaKnown RBP9.61□□□□□ -0.87
UBFD1-202ENST00000563366 PIANPQ8IYJ0 282 aa9.61□□□□□ -0.87
UBFD1-202ENST00000563366 NRSN1Q8IZ57 195 aa9.61□□□□□ -0.87
UBFD1-202ENST00000563366 PLD6Q8N2A8 252 aaKnown RBP9.61□□□□□ -0.87
UBFD1-202ENST00000563366 ZNF513Q8N8E2 541 aaPredicted RBP9.61□□□□□ -0.87
UBFD1-202ENST00000563366 ACVR1CQ8NER5 493 aa9.61□□□□□ -0.87
UBFD1-202ENST00000563366 EID2BQ96D98 161 aa9.61□□□□□ -0.87
UBFD1-202ENST00000563366 BIRC8Q96P09 236 aa9.61□□□□□ -0.87
UBFD1-202ENST00000563366 PANX3Q96QZ0 392 aa9.61□□□□□ -0.87
UBFD1-202ENST00000563366 COPS8Q99627 209 aa9.61□□□□□ -0.87
UBFD1-202ENST00000563366 DERL2Q9GZP9 239 aa9.61□□□□□ -0.87
UBFD1-202ENST00000563366 P2RY12Q9H244 342 aa9.61□□□□□ -0.87
UBFD1-202ENST00000563366 C12orf65Q9H3J6 166 aaKnown RBP9.61□□□□□ -0.87
UBFD1-202ENST00000563366 RABEP2Q9H5N1 569 aa9.61□□□□□ -0.87
UBFD1-202ENST00000563366 STN1Q9H668 368 aaKnown RBP9.61□□□□□ -0.87
UBFD1-202ENST00000563366 PCDH12Q9NPG4 1184 aa9.61□□□□□ -0.87
UBFD1-202ENST00000563366 CUEDC1Q9NWM3 386 aaPredicted RBP9.61□□□□□ -0.87
UBFD1-202ENST00000563366 OXSMQ9NWU1 459 aa9.61□□□□□ -0.87
UBFD1-202ENST00000563366 NCKIPSDQ9NZQ3 722 aa9.61□□□□□ -0.87
UBFD1-202ENST00000563366 KLHL42Q9P2K6 505 aa9.61□□□□□ -0.87
UBFD1-202ENST00000563366 XPR1Q9UBH6 696 aa9.61□□□□□ -0.87
UBFD1-202ENST00000563366 PPM1HQ9ULR3 514 aa9.61□□□□□ -0.87
UBFD1-202ENST00000563366 OAS3Q9Y6K5 1087 aaKnown RBP9.61□□□□□ -0.87
UBFD1-202ENST00000563366 USH1CQ9Y6N9 552 aa9.61□□□□□ -0.87
UBFD1-202ENST00000563366 LAMA3Q16787 3333 aa9.61□□□□□ -0.87
UBFD1-202ENST00000563366 DCDC2BA2VCK2 349 aa9.6□□□□□ -0.87
UBFD1-202ENST00000563366 A6NHS1 94 aa9.6□□□□□ -0.87
UBFD1-202ENST00000563366 G3V2L1 256 aa9.6□□□□□ -0.87
UBFD1-202ENST00000563366 EIF3FO00303 357 aaPredicted RBP9.6□□□□□ -0.87
UBFD1-202ENST00000563366 GAPDHSO14556 408 aaPredicted RBP9.6□□□□□ -0.87
UBFD1-202ENST00000563366 KPNA5O15131 536 aa9.6□□□□□ -0.87
UBFD1-202ENST00000563366 SYNCRIPO60506 623 aaKnown RBP9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms