RNA–Protein interactions for RNA: ENST00000563239.1

UBR1-204, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-204ENST00000563239 TSTD2Q5T7W7 516 aa8.43□□□□□ -1.06
UBR1-204ENST00000563239 CDCP2Q5VXM1 449 aa8.43□□□□□ -1.06
UBR1-204ENST00000563239 LRRC8BQ6P9F7 803 aa8.43□□□□□ -1.06
UBR1-204ENST00000563239 CRTC3Q6UUV7 619 aa8.43□□□□□ -1.06
UBR1-204ENST00000563239 SYT10Q6XYQ8 523 aa8.43□□□□□ -1.06
UBR1-204ENST00000563239 CHST15Q7LFX5 561 aaPredicted RBP8.43□□□□□ -1.06
UBR1-204ENST00000563239 TMPRSS7Q7RTY8 843 aa8.43□□□□□ -1.06
UBR1-204ENST00000563239 EFL1Q7Z2Z2 1120 aaKnown RBP8.43□□□□□ -1.06
UBR1-204ENST00000563239 SNX20Q7Z614 316 aa8.43□□□□□ -1.06
UBR1-204ENST00000563239 CAND1Q86VP6 1230 aaKnown RBP8.43□□□□□ -1.06
UBR1-204ENST00000563239 NAGSQ8N159 534 aa8.43□□□□□ -1.06
UBR1-204ENST00000563239 AGGF1Q8N302 714 aaeCLIP8.43□□□□□ -1.06
UBR1-204ENST00000563239 DNAAF3Q8N9W5 541 aa8.43□□□□□ -1.06
UBR1-204ENST00000563239 ZDHHC1Q8WTX9 485 aa8.43□□□□□ -1.06
UBR1-204ENST00000563239 STYXQ8WUJ0 223 aa8.43□□□□□ -1.06
UBR1-204ENST00000563239 SCG3Q8WXD2 468 aaKnown RBP8.43□□□□□ -1.06
UBR1-204ENST00000563239 LRRC45Q96CN5 670 aa8.43□□□□□ -1.06
UBR1-204ENST00000563239 PHF12Q96QT6 1004 aa8.43□□□□□ -1.06
UBR1-204ENST00000563239 ASB8Q9H765 288 aa8.43□□□□□ -1.06
UBR1-204ENST00000563239 CHRAC1Q9NRG0 131 aa8.43□□□□□ -1.06
UBR1-204ENST00000563239 NCKIPSDQ9NZQ3 722 aa8.43□□□□□ -1.06
UBR1-204ENST00000563239 TBC1D29Q9UFV1 150 aa8.43□□□□□ -1.06
UBR1-204ENST00000563239 PCYOX1Q9UHG3 505 aa8.43□□□□□ -1.06
UBR1-204ENST00000563239 APPL1Q9UKG1 709 aa8.43□□□□□ -1.06
UBR1-204ENST00000563239 RIMKLBQ9ULI2 386 aa8.43□□□□□ -1.06
UBR1-204ENST00000563239 DOLKQ9UPQ8 538 aa8.43□□□□□ -1.06
UBR1-204ENST00000563239 KCNK6Q9Y257 313 aa8.43□□□□□ -1.06
UBR1-204ENST00000563239 TCAF1Q9Y4C2 921 aa8.43□□□□□ -1.06
UBR1-204ENST00000563239 RNF215Q9Y6U7 377 aa8.43□□□□□ -1.06
UBR1-204ENST00000563239 ZZEF1O43149 2961 aa8.43□□□□□ -1.06
UBR1-204ENST00000563239 PTPRBP23467 1997 aa8.42□□□□□ -1.06
UBR1-204ENST00000563239 ASXL3Q9C0F0 2248 aa8.42□□□□□ -1.06
UBR1-204ENST00000563239 DMXL2Q8TDJ6 3036 aa8.42□□□□□ -1.06
UBR1-204ENST00000563239 IGLV3-16A0A075B6K0 115 aa8.42□□□□□ -1.06
UBR1-204ENST00000563239 GOLGA6L10A0A0M3HER8 536 aa8.42□□□□□ -1.06
UBR1-204ENST00000563239 HEATR9A2RTY3 570 aa8.42□□□□□ -1.06
UBR1-204ENST00000563239 FAM149AA5PLN7 773 aa8.42□□□□□ -1.06
UBR1-204ENST00000563239 OR51F1A6NGY5 319 aa8.42□□□□□ -1.06
UBR1-204ENST00000563239 KMOO15229 486 aa8.42□□□□□ -1.06
UBR1-204ENST00000563239 AVILO75366 819 aa8.42□□□□□ -1.06
UBR1-204ENST00000563239 CDK14O94921 469 aa8.42□□□□□ -1.06
UBR1-204ENST00000563239 ECEL1O95672 775 aa8.42□□□□□ -1.06
UBR1-204ENST00000563239 CDK4P11802 303 aa8.42□□□□□ -1.06
UBR1-204ENST00000563239 ZNF7P17097 686 aaPredicted RBP8.42□□□□□ -1.06
UBR1-204ENST00000563239 MGAT1P26572 445 aa8.42□□□□□ -1.06
UBR1-204ENST00000563239 FOXN2P32314 431 aa8.42□□□□□ -1.06
UBR1-204ENST00000563239 HADHAP40939 763 aa8.42□□□□□ -1.06
UBR1-204ENST00000563239 MAGEA3P43357 314 aa8.42□□□□□ -1.06
UBR1-204ENST00000563239 NPY2RP49146 381 aa8.42□□□□□ -1.06
UBR1-204ENST00000563239 RPIAP49247 311 aa8.42□□□□□ -1.06
UBR1-204ENST00000563239 CAMK2BQ13554 666 aa8.42□□□□□ -1.06
UBR1-204ENST00000563239 PTK6Q13882 451 aa8.42□□□□□ -1.06
UBR1-204ENST00000563239 SEMA3AQ14563 771 aa8.42□□□□□ -1.06
UBR1-204ENST00000563239 SKIDA1Q1XH10 827 aa8.42□□□□□ -1.06
UBR1-204ENST00000563239 PLA2G4EQ3MJ16 856 aa8.42□□□□□ -1.06
UBR1-204ENST00000563239 GPR33Q49SQ1 333 aa8.42□□□□□ -1.06
UBR1-204ENST00000563239 ZNF658BQ4V348 819 aaPredicted RBP8.42□□□□□ -1.06
UBR1-204ENST00000563239 C14orf28Q4W4Y0 310 aa8.42□□□□□ -1.06
UBR1-204ENST00000563239 PCID2Q5JVF3 399 aa8.42□□□□□ -1.06
UBR1-204ENST00000563239 TMEM220Q6QAJ8 160 aa8.42□□□□□ -1.06
UBR1-204ENST00000563239 CCNI2Q6ZMN8 369 aaPredicted RBP8.42□□□□□ -1.06
UBR1-204ENST00000563239 FAM83HQ6ZRV2 1179 aaPredicted RBP8.42□□□□□ -1.06
UBR1-204ENST00000563239 ZNF438Q7Z4V0 828 aa8.42□□□□□ -1.06
UBR1-204ENST00000563239 LRRTM4Q86VH4 590 aa8.42□□□□□ -1.06
UBR1-204ENST00000563239 SERPINA9Q86WD7 417 aa8.42□□□□□ -1.06
UBR1-204ENST00000563239 NXPE1Q8N323 547 aa8.42□□□□□ -1.06
UBR1-204ENST00000563239 MPP5Q8N3R9 675 aa8.42□□□□□ -1.06
UBR1-204ENST00000563239 ARL14Q8N4G2 192 aa8.42□□□□□ -1.06
UBR1-204ENST00000563239 BEND7Q8N7W2 519 aaPredicted RBP8.42□□□□□ -1.06
UBR1-204ENST00000563239 NAT8LQ8N9F0 302 aa8.42□□□□□ -1.06
UBR1-204ENST00000563239 MCUQ8NE86 351 aa8.42□□□□□ -1.06
UBR1-204ENST00000563239 GDAP1Q8TB36 358 aa8.42□□□□□ -1.06
UBR1-204ENST00000563239 GLMNQ92990 594 aa8.42□□□□□ -1.06
UBR1-204ENST00000563239 HDAC10Q969S8 669 aa8.42□□□□□ -1.06
UBR1-204ENST00000563239 CCDC74AQ96AQ1 378 aa8.42□□□□□ -1.06
UBR1-204ENST00000563239 SGF29Q96ES7 293 aa8.42□□□□□ -1.06
UBR1-204ENST00000563239 CCDC3Q9BQI4 270 aa8.42□□□□□ -1.06
UBR1-204ENST00000563239 TIMM29Q9BSF4 260 aa8.42□□□□□ -1.06
UBR1-204ENST00000563239 KIFC1Q9BW19 673 aa8.42□□□□□ -1.06
UBR1-204ENST00000563239 DPEP2Q9H4A9 486 aa8.42□□□□□ -1.06
UBR1-204ENST00000563239 KLC4Q9NSK0 619 aa8.42□□□□□ -1.06
UBR1-204ENST00000563239 TREX1Q9NSU2 369 aa8.42□□□□□ -1.06
UBR1-204ENST00000563239 SYBUQ9NX95 663 aa8.42□□□□□ -1.06
UBR1-204ENST00000563239 SCHIP1Q9P0W5 487 aaPredicted RBP8.42□□□□□ -1.06
UBR1-204ENST00000563239 ANGPTL2Q9UKU9 493 aa8.42□□□□□ -1.06
UBR1-204ENST00000563239 MSRB2Q9Y3D2 182 aa8.42□□□□□ -1.06
UBR1-204ENST00000563239 NEUROG3Q9Y4Z2 214 aa8.42□□□□□ -1.06
UBR1-204ENST00000563239 GOLGA4Q13439 2230 aaKnown RBP8.42□□□□□ -1.06
UBR1-204ENST00000563239 USP24Q9UPU5 2620 aa8.41□□□□□ -1.06
UBR1-204ENST00000563239 ARHGEF17Q96PE2 2063 aaPredicted RBP8.41□□□□□ -1.06
UBR1-204ENST00000563239 TRBV23OR9-2A0A075B6M9 112 aa8.41□□□□□ -1.06
UBR1-204ENST00000563239 A0A1W2PQM1 296 aa8.41□□□□□ -1.06
UBR1-204ENST00000563239 OR2AG2A6NM03 316 aa8.41□□□□□ -1.06
UBR1-204ENST00000563239 NTN3O00634 580 aaPredicted RBP8.41□□□□□ -1.06
UBR1-204ENST00000563239 PPM1DO15297 605 aa8.41□□□□□ -1.06
UBR1-204ENST00000563239 TP73O15350 636 aa8.41□□□□□ -1.06
UBR1-204ENST00000563239 B4GAT1O43505 415 aa8.41□□□□□ -1.06
UBR1-204ENST00000563239 POP7O75817 140 aaKnown RBP8.41□□□□□ -1.06
UBR1-204ENST00000563239 GAS8O95995 478 aa8.41□□□□□ -1.06
UBR1-204ENST00000563239 GOT2P00505 430 aaKnown RBP8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms