RNA–Protein interactions for RNA: ENST00000562722.1

SF3B3-202, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-202ENST00000562722 IQCDQ96DY2 449 aa12.79□□□□□ -0.36
SF3B3-202ENST00000562722 RNF157Q96PX1 679 aa12.79□□□□□ -0.36
SF3B3-202ENST00000562722 BRD8Q9H0E9 1235 aa12.79□□□□□ -0.36
SF3B3-202ENST00000562722 POT1Q9NUX5 634 aa12.79□□□□□ -0.36
SF3B3-202ENST00000562722 OGFRQ9NZT2 677 aa12.79□□□□□ -0.36
SF3B3-202ENST00000562722 ANKMY1Q9P2S6 941 aa12.79□□□□□ -0.36
SF3B3-202ENST00000562722 TRIM10Q9UDY6 481 aa12.79□□□□□ -0.36
SF3B3-202ENST00000562722 SLC23A2Q9UGH3 650 aa12.79□□□□□ -0.36
SF3B3-202ENST00000562722 LCMT1Q9UIC8 334 aa12.79□□□□□ -0.36
SF3B3-202ENST00000562722 CROTQ9UKG9 612 aa12.79□□□□□ -0.36
SF3B3-202ENST00000562722 CAPN11Q9UMQ6 739 aa12.79□□□□□ -0.36
SF3B3-202ENST00000562722 KCTD3Q9Y597 815 aa12.79□□□□□ -0.36
SF3B3-202ENST00000562722 SLC30A1Q9Y6M5 507 aa12.79□□□□□ -0.36
SF3B3-202ENST00000562722 MAST4O15021 2626 aa12.79□□□□□ -0.36
SF3B3-202ENST00000562722 MKRN2OSH3BPM6 223 aa12.78□□□□□ -0.36
SF3B3-202ENST00000562722 APOL1O14791 398 aa12.78□□□□□ -0.36
SF3B3-202ENST00000562722 TOX3O15405 576 aaPredicted RBP12.78□□□□□ -0.36
SF3B3-202ENST00000562722 KIAA0754O94854 1291 aa12.78□□□□□ -0.36
SF3B3-202ENST00000562722 CDK14O94921 469 aa12.78□□□□□ -0.36
SF3B3-202ENST00000562722 NDUFA10O95299 355 aa12.78□□□□□ -0.36
SF3B3-202ENST00000562722 C9P02748 559 aa12.78□□□□□ -0.36
SF3B3-202ENST00000562722 CCNYL3P0C7X3 344 aa12.78□□□□□ -0.36
SF3B3-202ENST00000562722 VCLP18206 1134 aa12.78□□□□□ -0.36
SF3B3-202ENST00000562722 IDSP22304 550 aa12.78□□□□□ -0.36
SF3B3-202ENST00000562722 SLC19A1P41440 591 aa12.78□□□□□ -0.36
SF3B3-202ENST00000562722 CDK18Q07002 472 aa12.78□□□□□ -0.36
SF3B3-202ENST00000562722 SRSF1Q07955 248 aaKnown RBP eCLIP12.78□□□□□ -0.36
SF3B3-202ENST00000562722 GTF2H3Q13889 308 aa12.78□□□□□ -0.36
SF3B3-202ENST00000562722 IL11RAQ14626 422 aa12.78□□□□□ -0.36
SF3B3-202ENST00000562722 MESDQ14696 234 aa12.78□□□□□ -0.36
SF3B3-202ENST00000562722 CACHD1Q5VU97 1274 aa12.78□□□□□ -0.36
SF3B3-202ENST00000562722 FAM92BQ6ZTR7 304 aa12.78□□□□□ -0.36
SF3B3-202ENST00000562722 LUZP1Q86V48 1076 aa12.78□□□□□ -0.36
SF3B3-202ENST00000562722 TRAPPC5Q8IUR0 188 aa12.78□□□□□ -0.36
SF3B3-202ENST00000562722 RSC1A1Q92681 617 aa12.78□□□□□ -0.36
SF3B3-202ENST00000562722 EID2BQ96D98 161 aa12.78□□□□□ -0.36
SF3B3-202ENST00000562722 IMP4Q96G21 291 aaKnown RBP12.78□□□□□ -0.36
SF3B3-202ENST00000562722 ZDHHC12Q96GR4 267 aa12.78□□□□□ -0.36
SF3B3-202ENST00000562722 TTC25Q96NG3 672 aa12.78□□□□□ -0.36
SF3B3-202ENST00000562722 TIMM29Q9BSF4 260 aa12.78□□□□□ -0.36
SF3B3-202ENST00000562722 PACSIN1Q9BY11 444 aa12.78□□□□□ -0.36
SF3B3-202ENST00000562722 ZNF768Q9H5H4 540 aaKnown RBP12.78□□□□□ -0.36
SF3B3-202ENST00000562722 CBX8Q9HC52 389 aa12.78□□□□□ -0.36
SF3B3-202ENST00000562722 MAGEE1Q9HCI5 957 aa12.78□□□□□ -0.36
SF3B3-202ENST00000562722 ZNF624Q9P2J8 865 aaPredicted RBP12.78□□□□□ -0.36
SF3B3-202ENST00000562722 TP53TG5Q9Y2B4 290 aa12.78□□□□□ -0.36
SF3B3-202ENST00000562722 ADGRG1Q9Y653 693 aa12.78□□□□□ -0.36
SF3B3-202ENST00000562722 UBR5O95071 2799 aaPredicted RBP12.77□□□□□ -0.36
SF3B3-202ENST00000562722 CDC14CA4D256 554 aa12.77□□□□□ -0.37
SF3B3-202ENST00000562722 OR52A4PA6NMU1 304 aa12.77□□□□□ -0.37
SF3B3-202ENST00000562722 GOLGA6L19H0YKK7 550 aa12.77□□□□□ -0.37
SF3B3-202ENST00000562722 PPP1R12AO14974 1030 aaPredicted RBP12.77□□□□□ -0.37
SF3B3-202ENST00000562722 CHUKO15111 745 aa12.77□□□□□ -0.37
SF3B3-202ENST00000562722 KIF1CO43896 1103 aaKnown RBP12.77□□□□□ -0.37
SF3B3-202ENST00000562722 VEGFDO43915 354 aa12.77□□□□□ -0.37
SF3B3-202ENST00000562722 BPIP17213 487 aa12.77□□□□□ -0.37
SF3B3-202ENST00000562722 F8A1P23610 371 aa12.77□□□□□ -0.37
SF3B3-202ENST00000562722 CASP14P31944 242 aa12.77□□□□□ -0.37
SF3B3-202ENST00000562722 PBX1P40424 430 aa12.77□□□□□ -0.37
SF3B3-202ENST00000562722 HALP42357 657 aa12.77□□□□□ -0.37
SF3B3-202ENST00000562722 CAPZBP47756 277 aa12.77□□□□□ -0.37
SF3B3-202ENST00000562722 DYNLT1P63172 113 aa12.77□□□□□ -0.37
SF3B3-202ENST00000562722 KLRB1Q12918 225 aa12.77□□□□□ -0.37
SF3B3-202ENST00000562722 GPR18Q14330 331 aa12.77□□□□□ -0.37
SF3B3-202ENST00000562722 PDK1Q15118 436 aa12.77□□□□□ -0.37
SF3B3-202ENST00000562722 CRTC2Q53ET0 693 aaPredicted RBP12.77□□□□□ -0.37
SF3B3-202ENST00000562722 CYB5D1Q6P9G0 228 aa12.77□□□□□ -0.37
SF3B3-202ENST00000562722 TMC3Q7Z5M5 1100 aa12.77□□□□□ -0.37
SF3B3-202ENST00000562722 RFX6Q8HWS3 928 aa12.77□□□□□ -0.37
SF3B3-202ENST00000562722 PLD5Q8N7P1 536 aa12.77□□□□□ -0.37
SF3B3-202ENST00000562722 TEX19Q8NA77 164 aa12.77□□□□□ -0.37
SF3B3-202ENST00000562722 TRIB3Q96RU7 358 aa12.77□□□□□ -0.37
SF3B3-202ENST00000562722 TWSG1Q9GZX9 223 aa12.77□□□□□ -0.37
SF3B3-202ENST00000562722 SLC25A51Q9H1U9 297 aa12.77□□□□□ -0.37
SF3B3-202ENST00000562722 DEF6Q9H4E7 631 aa12.77□□□□□ -0.37
SF3B3-202ENST00000562722 BPIFA1Q9NP55 256 aa12.77□□□□□ -0.37
SF3B3-202ENST00000562722 KCND3Q9UK17 655 aa12.77□□□□□ -0.37
SF3B3-202ENST00000562722 POLHQ9Y253 713 aa12.77□□□□□ -0.37
SF3B3-202ENST00000562722 PLAAQ9Y263 795 aa12.77□□□□□ -0.37
SF3B3-202ENST00000562722 KCNMB2Q9Y691 235 aa12.77□□□□□ -0.37
SF3B3-202ENST00000562722 PIPSLA2A3N6 862 aa12.76□□□□□ -0.37
SF3B3-202ENST00000562722 PMPCBO75439 489 aa12.76□□□□□ -0.37
SF3B3-202ENST00000562722 KRT1P04264 644 aa12.76□□□□□ -0.37
SF3B3-202ENST00000562722 GYPCP04921 128 aa12.76□□□□□ -0.37
SF3B3-202ENST00000562722 TNNT1P13805 278 aa12.76□□□□□ -0.37
SF3B3-202ENST00000562722 NR1D1P20393 614 aa12.76□□□□□ -0.37
SF3B3-202ENST00000562722 TNNT3P45378 269 aaPredicted RBP12.76□□□□□ -0.37
SF3B3-202ENST00000562722 ARL4DP49703 201 aa12.76□□□□□ -0.37
SF3B3-202ENST00000562722 NPNTQ6UXI9 565 aa12.76□□□□□ -0.37
SF3B3-202ENST00000562722 B4GALNT4Q76KP1 1039 aa12.76□□□□□ -0.37
SF3B3-202ENST00000562722 PRSS42Q7Z5A4 293 aa12.76□□□□□ -0.37
SF3B3-202ENST00000562722 ATCAYQ86WG3 371 aa12.76□□□□□ -0.37
SF3B3-202ENST00000562722 PPP1R3BQ86XI6 285 aa12.76□□□□□ -0.37
SF3B3-202ENST00000562722 RBM12BQ8IXT5 1001 aaKnown RBP12.76□□□□□ -0.37
SF3B3-202ENST00000562722 SPATA22Q8NHS9 363 aa12.76□□□□□ -0.37
SF3B3-202ENST00000562722 SRPK1Q96SB4 655 aaKnown RBP12.76□□□□□ -0.37
SF3B3-202ENST00000562722 PDE7BQ9NP56 450 aa12.76□□□□□ -0.37
SF3B3-202ENST00000562722 SLC40A1Q9NP59 571 aa12.76□□□□□ -0.37
SF3B3-202ENST00000562722 UBP1Q9NZI7 540 aa12.76□□□□□ -0.37
SF3B3-202ENST00000562722 NFKBIL1Q9UBC1 381 aaPredicted RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms