RNA–Protein interactions for RNA: ENST00000562307.1

CDH13-205, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-205ENST00000562307 ABCG8Q9H221 673 aa9.42□□□□□ -0.9
CDH13-205ENST00000562307 ACTR5Q9H9F9 607 aaPredicted RBP9.42□□□□□ -0.9
CDH13-205ENST00000562307 SPATS2LQ9NUQ6 558 aaKnown RBP9.42□□□□□ -0.9
CDH13-205ENST00000562307 HEY2Q9UBP5 337 aa9.42□□□□□ -0.9
CDH13-205ENST00000562307 SLC12A4Q9UP95 1085 aa9.42□□□□□ -0.9
CDH13-205ENST00000562307 RRP15Q9Y3B9 282 aaKnown RBP9.42□□□□□ -0.9
CDH13-205ENST00000562307 STON1Q9Y6Q2 735 aa9.42□□□□□ -0.9
CDH13-205ENST00000562307 ANTXRLA6NF34 631 aa9.41□□□□□ -0.9
CDH13-205ENST00000562307 GRXCR2A6NFK2 248 aa9.41□□□□□ -0.9
CDH13-205ENST00000562307 STX16-NPEPL1H3BU86 382 aa9.41□□□□□ -0.9
CDH13-205ENST00000562307 EIF3FO00303 357 aaPredicted RBP9.41□□□□□ -0.9
CDH13-205ENST00000562307 CDC7O00311 574 aa9.41□□□□□ -0.9
CDH13-205ENST00000562307 MATN2O00339 956 aa9.41□□□□□ -0.9
CDH13-205ENST00000562307 STX16O14662 325 aa9.41□□□□□ -0.9
CDH13-205ENST00000562307 WNT9AO14904 365 aa9.41□□□□□ -0.9
CDH13-205ENST00000562307 MAGEC1O60732 1142 aa9.41□□□□□ -0.9
CDH13-205ENST00000562307 SLC25A14O95258 325 aaPredicted RBP9.41□□□□□ -0.9
CDH13-205ENST00000562307 EPHX1P07099 455 aa9.41□□□□□ -0.9
CDH13-205ENST00000562307 CHRNGP07510 517 aa9.41□□□□□ -0.9
CDH13-205ENST00000562307 OR56A5P0C7T3 313 aa9.41□□□□□ -0.9
CDH13-205ENST00000562307 ELFN1P0C7U0 828 aa9.41□□□□□ -0.9
CDH13-205ENST00000562307 CBSLP0DN79 551 aa9.41□□□□□ -0.9
CDH13-205ENST00000562307 KITP10721 976 aa9.41□□□□□ -0.9
CDH13-205ENST00000562307 ADRB3P13945 408 aa9.41□□□□□ -0.9
CDH13-205ENST00000562307 ATP1B2P14415 290 aaPredicted RBP9.41□□□□□ -0.9
CDH13-205ENST00000562307 DGKAP23743 735 aa9.41□□□□□ -0.9
CDH13-205ENST00000562307 CBSP35520 551 aa9.41□□□□□ -0.9
CDH13-205ENST00000562307 ETV3P41162 512 aa9.41□□□□□ -0.9
CDH13-205ENST00000562307 IDH3AP50213 366 aa9.41□□□□□ -0.9
CDH13-205ENST00000562307 RPL14P50914 215 aaKnown RBP9.41□□□□□ -0.9
CDH13-205ENST00000562307 HERVK_113P63132 956 aa9.41□□□□□ -0.9
CDH13-205ENST00000562307 DPTQ07507 201 aa9.41□□□□□ -0.9
CDH13-205ENST00000562307 TUBB3Q13509 450 aa9.41□□□□□ -0.9
CDH13-205ENST00000562307 GBX1Q14549 363 aa9.41□□□□□ -0.9
CDH13-205ENST00000562307 TSNQ15631 228 aaKnown RBP9.41□□□□□ -0.9
CDH13-205ENST00000562307 UNC50Q53HI1 259 aa9.41□□□□□ -0.9
CDH13-205ENST00000562307 ZNF678Q5SXM1 525 aa9.41□□□□□ -0.9
CDH13-205ENST00000562307 FBXL19Q6PCT2 694 aa9.41□□□□□ -0.9
CDH13-205ENST00000562307 EPGNQ6UW88 154 aa9.41□□□□□ -0.9
CDH13-205ENST00000562307 CYHR1Q6ZMK1 362 aa9.41□□□□□ -0.9
CDH13-205ENST00000562307 FRMD7Q6ZUT3 714 aa9.41□□□□□ -0.9
CDH13-205ENST00000562307 MAVSQ7Z434 540 aa9.41□□□□□ -0.9
CDH13-205ENST00000562307 CLNKQ7Z7G1 428 aa9.41□□□□□ -0.9
CDH13-205ENST00000562307 MTDHQ86UE4 582 aaKnown RBP9.41□□□□□ -0.9
CDH13-205ENST00000562307 CPNE9Q8IYJ1 553 aa9.41□□□□□ -0.9
CDH13-205ENST00000562307 KIRREL3Q8IZU9 778 aa9.41□□□□□ -0.9
CDH13-205ENST00000562307 ZBTB2Q8N680 514 aa9.41□□□□□ -0.9
CDH13-205ENST00000562307 CCNYL1Q8N7R7 359 aa9.41□□□□□ -0.9
CDH13-205ENST00000562307 ZNF781Q8N8C0 355 aa9.41□□□□□ -0.9
CDH13-205ENST00000562307 LKAAEAR1Q8TD35 194 aa9.41□□□□□ -0.9
CDH13-205ENST00000562307 BTN2A2Q8WVV5 523 aa9.41□□□□□ -0.9
CDH13-205ENST00000562307 SCAMP4Q969E2 229 aa9.41□□□□□ -0.9
CDH13-205ENST00000562307 FUBP1Q96AE4 644 aaKnown RBP9.41□□□□□ -0.9
CDH13-205ENST00000562307 FAM136AQ96C01 138 aa9.41□□□□□ -0.9
CDH13-205ENST00000562307 MOCOSQ96EN8 888 aa9.41□□□□□ -0.9
CDH13-205ENST00000562307 LINGO1Q96FE5 620 aa9.41□□□□□ -0.9
CDH13-205ENST00000562307 DTD2Q96FN9 168 aa9.41□□□□□ -0.9
CDH13-205ENST00000562307 ASB2Q96Q27 587 aa9.41□□□□□ -0.9
CDH13-205ENST00000562307 PANX3Q96QZ0 392 aa9.41□□□□□ -0.9
CDH13-205ENST00000562307 RIOK2Q9BVS4 552 aaKnown RBP9.41□□□□□ -0.9
CDH13-205ENST00000562307 SPATA16Q9BXB7 569 aa9.41□□□□□ -0.9
CDH13-205ENST00000562307 C1QTNF3Q9BXJ4 246 aa9.41□□□□□ -0.9
CDH13-205ENST00000562307 ERVK-6Q9BXR3 956 aa9.41□□□□□ -0.9
CDH13-205ENST00000562307 GSTO2Q9H4Y5 243 aa9.41□□□□□ -0.9
CDH13-205ENST00000562307 C8orf33Q9H7E9 229 aaPredicted RBP9.41□□□□□ -0.9
CDH13-205ENST00000562307 SAR1AQ9NR31 198 aa9.41□□□□□ -0.9
CDH13-205ENST00000562307 KCTD5Q9NXV2 234 aa9.41□□□□□ -0.9
CDH13-205ENST00000562307 CACNA2D2Q9NY47 1150 aa9.41□□□□□ -0.9
CDH13-205ENST00000562307 VTI1BQ9UEU0 232 aa9.41□□□□□ -0.9
CDH13-205ENST00000562307 MARCOQ9UEW3 520 aaPredicted RBP9.41□□□□□ -0.9
CDH13-205ENST00000562307 ZDHHC2Q9UIJ5 367 aa9.41□□□□□ -0.9
CDH13-205ENST00000562307 RNF112Q9ULX5 631 aa9.41□□□□□ -0.9
CDH13-205ENST00000562307 APOBEC2Q9Y235 224 aaKnown RBP9.41□□□□□ -0.9
CDH13-205ENST00000562307 FADS2P1A8MWK0 482 aa9.4□□□□□ -0.9
CDH13-205ENST00000562307 CFAP99D6REC4 459 aa9.4□□□□□ -0.9
CDH13-205ENST00000562307 SPECC1L-ADORA2AF8WAN1 911 aa9.4□□□□□ -0.9
CDH13-205ENST00000562307 UBXN8O00124 270 aa9.4□□□□□ -0.9
CDH13-205ENST00000562307 BTN3A1O00481 513 aa9.4□□□□□ -0.9
CDH13-205ENST00000562307 HDAC3O15379 428 aa9.4□□□□□ -0.9
CDH13-205ENST00000562307 GRID2O43424 1007 aa9.4□□□□□ -0.9
CDH13-205ENST00000562307 AP1G1O43747 822 aa9.4□□□□□ -0.9
CDH13-205ENST00000562307 SGTAO43765 313 aa9.4□□□□□ -0.9
CDH13-205ENST00000562307 CCDC22O60826 627 aa9.4□□□□□ -0.9
CDH13-205ENST00000562307 ATP5HO75947 161 aa9.4□□□□□ -0.9
CDH13-205ENST00000562307 FSBPO95073 299 aa9.4□□□□□ -0.9
CDH13-205ENST00000562307 IGFBP4P22692 258 aa9.4□□□□□ -0.9
CDH13-205ENST00000562307 MPSTP25325 297 aa9.4□□□□□ -0.9
CDH13-205ENST00000562307 AOAHP28039 575 aa9.4□□□□□ -0.9
CDH13-205ENST00000562307 SERPINB3P29508 390 aa9.4□□□□□ -0.9
CDH13-205ENST00000562307 CTHP32929 405 aa9.4□□□□□ -0.9
CDH13-205ENST00000562307 P2RY2P41231 377 aa9.4□□□□□ -0.9
CDH13-205ENST00000562307 CCR10P46092 362 aa9.4□□□□□ -0.9
CDH13-205ENST00000562307 SCTRP47872 440 aa9.4□□□□□ -0.9
CDH13-205ENST00000562307 SOX9P48436 509 aa9.4□□□□□ -0.9
CDH13-205ENST00000562307 RGS4P49798 205 aa9.4□□□□□ -0.9
CDH13-205ENST00000562307 ACTN3Q08043 901 aaPredicted RBP9.4□□□□□ -0.9
CDH13-205ENST00000562307 KRT72Q14CN4 511 aa9.4□□□□□ -0.9
CDH13-205ENST00000562307 ACOX1Q15067 660 aa9.4□□□□□ -0.9
CDH13-205ENST00000562307 AAK1Q2M2I8 961 aa9.4□□□□□ -0.9
CDH13-205ENST00000562307 ZNF284Q2VY69 593 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms