RNA–Protein interactions for RNA: ENST00000561395.5

TPM1-231, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 673 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-231ENST00000561395 KLHL32Q96NJ5 620 aa7.47□□□□□ -1.21
TPM1-231ENST00000561395 NDNQ99608 321 aa7.47□□□□□ -1.21
TPM1-231ENST00000561395 AARSD1Q9BTE6 412 aaKnown RBP7.47□□□□□ -1.21
TPM1-231ENST00000561395 MECRQ9BV79 373 aa7.47□□□□□ -1.21
TPM1-231ENST00000561395 ZFYVE1Q9HBF4 777 aa7.47□□□□□ -1.21
TPM1-231ENST00000561395 BPIFA1Q9NP55 256 aa7.47□□□□□ -1.21
TPM1-231ENST00000561395 TMEM9BQ9NQ34 198 aa7.47□□□□□ -1.21
TPM1-231ENST00000561395 ZNF358Q9NW07 568 aa7.47□□□□□ -1.21
TPM1-231ENST00000561395 GTSE1Q9NYZ3 720 aa7.47□□□□□ -1.21
TPM1-231ENST00000561395 TMEM216Q9P0N5 145 aa7.47□□□□□ -1.21
TPM1-231ENST00000561395 DKK3Q9UBP4 350 aa7.47□□□□□ -1.21
TPM1-231ENST00000561395 IL36AQ9UHA7 158 aa7.47□□□□□ -1.21
TPM1-231ENST00000561395 PLA2G4CQ9UP65 541 aa7.47□□□□□ -1.21
TPM1-231ENST00000561395 VPS9D1Q9Y2B5 631 aa7.47□□□□□ -1.21
TPM1-231ENST00000561395 ASXL3Q9C0F0 2248 aa7.46□□□□□ -1.22
TPM1-231ENST00000561395 ERICH4A6NGS2 130 aa7.46□□□□□ -1.22
TPM1-231ENST00000561395 UPK3BL1B0FP48 263 aa7.46□□□□□ -1.22
TPM1-231ENST00000561395 UPK3BL2E5RIL1 263 aa7.46□□□□□ -1.22
TPM1-231ENST00000561395 SPECC1L-ADORA2AF8WAN1 911 aa7.46□□□□□ -1.22
TPM1-231ENST00000561395 PFDN6O15212 129 aa7.46□□□□□ -1.22
TPM1-231ENST00000561395 EDF1O60869 148 aaKnown RBP7.46□□□□□ -1.22
TPM1-231ENST00000561395 NDUFS3O75489 264 aa7.46□□□□□ -1.22
TPM1-231ENST00000561395 KLHL2O95198 593 aa7.46□□□□□ -1.22
TPM1-231ENST00000561395 IL1BP01584 269 aa7.46□□□□□ -1.22
TPM1-231ENST00000561395 CAPNS1P04632 268 aa7.46□□□□□ -1.22
TPM1-231ENST00000561395 TIMP2P16035 220 aa7.46□□□□□ -1.22
TPM1-231ENST00000561395 BPIP17213 487 aa7.46□□□□□ -1.22
TPM1-231ENST00000561395 BGNP21810 368 aa7.46□□□□□ -1.22
TPM1-231ENST00000561395 FDXRP22570 491 aa7.46□□□□□ -1.22
TPM1-231ENST00000561395 LHCGRP22888 699 aa7.46□□□□□ -1.22
TPM1-231ENST00000561395 CTHP32929 405 aa7.46□□□□□ -1.22
TPM1-231ENST00000561395 SPAM1P38567 509 aa7.46□□□□□ -1.22
TPM1-231ENST00000561395 GRIA2P42262 883 aa7.46□□□□□ -1.22
TPM1-231ENST00000561395 CDKN1CP49918 316 aaPredicted RBP7.46□□□□□ -1.22
TPM1-231ENST00000561395 SUOXP51687 545 aa7.46□□□□□ -1.22
TPM1-231ENST00000561395 POLR2LP62875 67 aaKnown RBP7.46□□□□□ -1.22
TPM1-231ENST00000561395 TIAL1Q01085 375 aaKnown RBP eCLIP7.46□□□□□ -1.22
TPM1-231ENST00000561395 DMTNQ08495 405 aa7.46□□□□□ -1.22
TPM1-231ENST00000561395 DLG1Q12959 904 aa7.46□□□□□ -1.22
TPM1-231ENST00000561395 CCINQ13939 588 aa7.46□□□□□ -1.22
TPM1-231ENST00000561395 ZNF234Q14588 700 aa7.46□□□□□ -1.22
TPM1-231ENST00000561395 PCLAFQ15004 111 aa7.46□□□□□ -1.22
TPM1-231ENST00000561395 PON2Q15165 354 aa7.46□□□□□ -1.22
TPM1-231ENST00000561395 TSNAXIP1Q2TAA8 658 aa7.46□□□□□ -1.22
TPM1-231ENST00000561395 HNRNPA1L2Q32P51 320 aaKnown RBP7.46□□□□□ -1.22
TPM1-231ENST00000561395 ITPRIPL2Q3MIP1 535 aa7.46□□□□□ -1.22
TPM1-231ENST00000561395 PREPLQ4J6C6 727 aaPredicted RBP7.46□□□□□ -1.22
TPM1-231ENST00000561395 ZNF805Q5CZA5 627 aa7.46□□□□□ -1.22
TPM1-231ENST00000561395 C9orf64Q5T6V5 341 aa7.46□□□□□ -1.22
TPM1-231ENST00000561395 GKAP1Q5VSY0 366 aaPredicted RBP7.46□□□□□ -1.22
TPM1-231ENST00000561395 LRRC66Q68CR7 880 aa7.46□□□□□ -1.22
TPM1-231ENST00000561395 FAM151BQ6UXP7 276 aa7.46□□□□□ -1.22
TPM1-231ENST00000561395 FAM47EQ6ZV65 393 aa7.46□□□□□ -1.22
TPM1-231ENST00000561395 TBC1D1Q86TI0 1168 aaPredicted RBP7.46□□□□□ -1.22
TPM1-231ENST00000561395 NUDCD3Q8IVD9 361 aa7.46□□□□□ -1.22
TPM1-231ENST00000561395 CBARPQ8N350 705 aaPredicted RBP7.46□□□□□ -1.22
TPM1-231ENST00000561395 ZNF366Q8N895 744 aa7.46□□□□□ -1.22
TPM1-231ENST00000561395 CCDC63Q8NA47 563 aa7.46□□□□□ -1.22
TPM1-231ENST00000561395 RDH11Q8TC12 318 aa7.46□□□□□ -1.22
TPM1-231ENST00000561395 HCAR2Q8TDS4 363 aa7.46□□□□□ -1.22
TPM1-231ENST00000561395 UCMAQ8WVF2 138 aa7.46□□□□□ -1.22
TPM1-231ENST00000561395 KCTD4Q8WVF5 259 aa7.46□□□□□ -1.22
TPM1-231ENST00000561395 TBRG4Q969Z0 631 aaKnown RBP eCLIP7.46□□□□□ -1.22
TPM1-231ENST00000561395 SEC16BQ96JE7 1060 aa7.46□□□□□ -1.22
TPM1-231ENST00000561395 TSNARE1Q96NA8 513 aa7.46□□□□□ -1.22
TPM1-231ENST00000561395 GPR78Q96P69 363 aa7.46□□□□□ -1.22
TPM1-231ENST00000561395 HS3ST6Q96QI5 342 aa7.46□□□□□ -1.22
TPM1-231ENST00000561395 DUSP15Q9H1R2 295 aaPredicted RBP7.46□□□□□ -1.22
TPM1-231ENST00000561395 TMEM245Q9H330 911 aa7.46□□□□□ -1.22
TPM1-231ENST00000561395 MTG2Q9H4K7 406 aa7.46□□□□□ -1.22
TPM1-231ENST00000561395 FAM96AQ9H5X1 160 aa7.46□□□□□ -1.22
TPM1-231ENST00000561395 MANSC1Q9H8J5 431 aa7.46□□□□□ -1.22
TPM1-231ENST00000561395 NMRAL1Q9HBL8 299 aa7.46□□□□□ -1.22
TPM1-231ENST00000561395 POPDC3Q9HBV1 291 aa7.46□□□□□ -1.22
TPM1-231ENST00000561395 SLCO1B3Q9NPD5 702 aa7.46□□□□□ -1.22
TPM1-231ENST00000561395 COPG2Q9UBF2 871 aa7.46□□□□□ -1.22
TPM1-231ENST00000561395 B4GALT6Q9UBX8 382 aa7.46□□□□□ -1.22
TPM1-231ENST00000561395 MID2Q9UJV3 735 aa7.46□□□□□ -1.22
TPM1-231ENST00000561395 CRYL1Q9Y2S2 319 aa7.46□□□□□ -1.22
TPM1-231ENST00000561395 ACOT9Q9Y305 439 aa7.46□□□□□ -1.22
TPM1-231ENST00000561395 VWA7Q9Y334 891 aa7.46□□□□□ -1.22
TPM1-231ENST00000561395 STARD13Q9Y3M8 1113 aa7.46□□□□□ -1.22
TPM1-231ENST00000561395 SLC30A1Q9Y6M5 507 aa7.46□□□□□ -1.22
TPM1-231ENST00000561395 MYO18BQ8IUG5 2567 aa7.46□□□□□ -1.22
TPM1-231ENST00000561395 PCDH15Q96QU1 1955 aa7.46□□□□□ -1.22
TPM1-231ENST00000561395 CKAP5Q14008 2032 aa7.45□□□□□ -1.22
TPM1-231ENST00000561395 URB1O60287 2271 aaKnown RBP7.45□□□□□ -1.22
TPM1-231ENST00000561395 TRBV5-4A0A0C4DH59 114 aa7.45□□□□□ -1.22
TPM1-231ENST00000561395 GLYATL1P3A0A0U1RQE8 302 aa7.45□□□□□ -1.22
TPM1-231ENST00000561395 UBA6A0AVT1 1052 aaPredicted RBP7.45□□□□□ -1.22
TPM1-231ENST00000561395 TBC1D3BA6NDS4 549 aa7.45□□□□□ -1.22
TPM1-231ENST00000561395 G3V2L1 256 aa7.45□□□□□ -1.22
TPM1-231ENST00000561395 CDX4O14627 284 aaPredicted RBP7.45□□□□□ -1.22
TPM1-231ENST00000561395 GPR39O43194 453 aa7.45□□□□□ -1.22
TPM1-231ENST00000561395 SNX3O60493 162 aa7.45□□□□□ -1.22
TPM1-231ENST00000561395 DNAJC6O75061 913 aa7.45□□□□□ -1.22
TPM1-231ENST00000561395 SNNO75324 88 aaPredicted RBP7.45□□□□□ -1.22
TPM1-231ENST00000561395 SRP72O76094 671 aaKnown RBP7.45□□□□□ -1.22
TPM1-231ENST00000561395 RHOBTB1O94844 696 aa7.45□□□□□ -1.22
TPM1-231ENST00000561395 KAT7O95251 611 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms