RNA–Protein interactions for RNA: ENST00000561065.1

LMX1B-204, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1B, Length 1,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-204ENST00000561065 GEMP55040 296 aa15.75■□□□□ 0.11
LMX1B-204ENST00000561065 NFATC2Q13469 925 aa15.75■□□□□ 0.11
LMX1B-204ENST00000561065 SQSTM1Q13501 440 aa15.75■□□□□ 0.11
LMX1B-204ENST00000561065 ATP13A5Q4VNC0 1218 aa15.75■□□□□ 0.11
LMX1B-204ENST00000561065 KIAA1614Q5VZ46 1190 aa15.75■□□□□ 0.11
LMX1B-204ENST00000561065 PDPK2PQ6A1A2 396 aa15.75■□□□□ 0.11
LMX1B-204ENST00000561065 IYDQ6PHW0 289 aa15.75■□□□□ 0.11
LMX1B-204ENST00000561065 ZNF662Q6ZS27 426 aa15.75■□□□□ 0.11
LMX1B-204ENST00000561065 ZFAND4Q86XD8 727 aa15.75■□□□□ 0.11
LMX1B-204ENST00000561065 PHYKPLQ8IUZ5 450 aa15.75■□□□□ 0.11
LMX1B-204ENST00000561065 SLC25A41Q8N5S1 370 aa15.75■□□□□ 0.11
LMX1B-204ENST00000561065 IPMKQ8NFU5 416 aa15.75■□□□□ 0.11
LMX1B-204ENST00000561065 OR4D9Q8NGE8 314 aa15.75■□□□□ 0.11
LMX1B-204ENST00000561065 ACTL9Q8TC94 416 aa15.75■□□□□ 0.11
LMX1B-204ENST00000561065 ALG3Q92685 438 aa15.75■□□□□ 0.11
LMX1B-204ENST00000561065 FSD1LQ9BXM9 530 aa15.75■□□□□ 0.11
LMX1B-204ENST00000561065 FRMD8P1Q9BZ68 369 aaPredicted RBP15.75■□□□□ 0.11
LMX1B-204ENST00000561065 TRIM39Q9HCM9 518 aa15.75■□□□□ 0.11
LMX1B-204ENST00000561065 SARS2Q9NP81 518 aaKnown RBP15.75■□□□□ 0.11
LMX1B-204ENST00000561065 PRDM8Q9NQV8 689 aa15.75■□□□□ 0.11
LMX1B-204ENST00000561065 RSPH14Q9UHP6 348 aa15.75■□□□□ 0.11
LMX1B-204ENST00000561065 ERVH48-1M5A8F1 160 aa15.74■□□□□ 0.11
LMX1B-204ENST00000561065 GAPDHSO14556 408 aaPredicted RBP15.74■□□□□ 0.11
LMX1B-204ENST00000561065 SNX2O60749 519 aa15.74■□□□□ 0.11
LMX1B-204ENST00000561065 LIPCP11150 499 aa15.74■□□□□ 0.11
LMX1B-204ENST00000561065 PYGMP11217 842 aa15.74■□□□□ 0.11
LMX1B-204ENST00000561065 FGF3P11487 239 aaPredicted RBP15.74■□□□□ 0.11
LMX1B-204ENST00000561065 WT1P19544 449 aaPredicted RBP15.74■□□□□ 0.11
LMX1B-204ENST00000561065 HLA-DPA1P20036 260 aa15.74■□□□□ 0.11
LMX1B-204ENST00000561065 UBE2IP63279 158 aaKnown RBP15.74■□□□□ 0.11
LMX1B-204ENST00000561065 GPLD1P80108 840 aa15.74■□□□□ 0.11
LMX1B-204ENST00000561065 OTUD4Q01804 1114 aaKnown RBP15.74■□□□□ 0.11
LMX1B-204ENST00000561065 OLIG2Q13516 323 aa15.74■□□□□ 0.11
LMX1B-204ENST00000561065 SLC1A5Q15758 541 aa15.74■□□□□ 0.11
LMX1B-204ENST00000561065 SEL1L2Q5TEA6 688 aa15.74■□□□□ 0.11
LMX1B-204ENST00000561065 VASH2Q86V25 355 aa15.74■□□□□ 0.11
LMX1B-204ENST00000561065 DTX1Q86Y01 620 aa15.74■□□□□ 0.11
LMX1B-204ENST00000561065 HES6Q96HZ4 224 aa15.74■□□□□ 0.11
LMX1B-204ENST00000561065 PLEKHG4BQ96PX9 1271 aa15.74■□□□□ 0.11
LMX1B-204ENST00000561065 VPS35Q96QK1 796 aa15.74■□□□□ 0.11
LMX1B-204ENST00000561065 SLC38A3Q99624 504 aa15.74■□□□□ 0.11
LMX1B-204ENST00000561065 FAM118BQ9BPY3 351 aa15.74■□□□□ 0.11
LMX1B-204ENST00000561065 SEMA4CQ9C0C4 833 aa15.74■□□□□ 0.11
LMX1B-204ENST00000561065 GBA3Q9H227 469 aa15.74■□□□□ 0.11
LMX1B-204ENST00000561065 KLC4Q9NSK0 619 aa15.74■□□□□ 0.11
LMX1B-204ENST00000561065 BUD23O43709 281 aaKnown RBP15.73■□□□□ 0.11
LMX1B-204ENST00000561065 DUX1O43812 170 aa15.73■□□□□ 0.11
LMX1B-204ENST00000561065 PPFIA2O75334 1257 aa15.73■□□□□ 0.11
LMX1B-204ENST00000561065 STIP1P31948 543 aaKnown RBP15.73■□□□□ 0.11
LMX1B-204ENST00000561065 HMGCLP35914 325 aa15.73■□□□□ 0.11
LMX1B-204ENST00000561065 CLCNKAP51800 687 aa15.73■□□□□ 0.11
LMX1B-204ENST00000561065 TRA2AQ13595 282 aaKnown RBP eCLIP15.73■□□□□ 0.11
LMX1B-204ENST00000561065 RPS6KA1Q15418 735 aa15.73■□□□□ 0.11
LMX1B-204ENST00000561065 TMEM71Q6P5X7 295 aa15.73■□□□□ 0.11
LMX1B-204ENST00000561065 C11orf96Q7Z7L8 435 aa15.73■□□□□ 0.11
LMX1B-204ENST00000561065 BMPERQ8N8U9 685 aa15.73■□□□□ 0.11
LMX1B-204ENST00000561065 TRIM58Q8NG06 486 aa15.73■□□□□ 0.11
LMX1B-204ENST00000561065 MAIP1Q8WWC4 291 aa15.73■□□□□ 0.11
LMX1B-204ENST00000561065 CCNL2Q96S94 520 aaPredicted RBP15.73■□□□□ 0.11
LMX1B-204ENST00000561065 TBC1D10AQ9BXI6 508 aa15.73■□□□□ 0.11
LMX1B-204ENST00000561065 OSGEPL1Q9H4B0 414 aa15.73■□□□□ 0.11
LMX1B-204ENST00000561065 GRPEL1Q9HAV7 217 aa15.73■□□□□ 0.11
LMX1B-204ENST00000561065 IL26Q9NPH9 171 aa15.73■□□□□ 0.11
LMX1B-204ENST00000561065 OCIAD1Q9NX40 245 aa15.73■□□□□ 0.11
LMX1B-204ENST00000561065 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.73■□□□□ 0.11
LMX1B-204ENST00000561065 IL17CQ9P0M4 197 aa15.73■□□□□ 0.11
LMX1B-204ENST00000561065 PDP2Q9P2J9 529 aa15.73■□□□□ 0.11
LMX1B-204ENST00000561065 BOD1L1Q8NFC6 3051 aa15.73■□□□□ 0.11
LMX1B-204ENST00000561065 COL6A6A6NMZ7 2263 aa15.73■□□□□ 0.11
LMX1B-204ENST00000561065 KIR2DS5A0A0G2JLQ3 304 aa15.72■□□□□ 0.11
LMX1B-204ENST00000561065 A0A0G2JNG1 304 aa15.72■□□□□ 0.11
LMX1B-204ENST00000561065 EIF4E1BA6NMX2 242 aaKnown RBP15.72■□□□□ 0.11
LMX1B-204ENST00000561065 GPR89AB7ZAQ6 455 aa15.72■□□□□ 0.11
LMX1B-204ENST00000561065 KIR2DS3K7RE56 304 aa15.72■□□□□ 0.11
LMX1B-204ENST00000561065 TK2O00142 265 aa15.72■□□□□ 0.11
LMX1B-204ENST00000561065 KCNN4O15554 427 aa15.72■□□□□ 0.11
LMX1B-204ENST00000561065 PSMD3O43242 534 aa15.72■□□□□ 0.11
LMX1B-204ENST00000561065 FTCDO95954 541 aa15.72■□□□□ 0.11
LMX1B-204ENST00000561065 GPR89BP0CG08 455 aa15.72■□□□□ 0.11
LMX1B-204ENST00000561065 BRAFP15056 766 aa15.72■□□□□ 0.11
LMX1B-204ENST00000561065 PDE1BQ01064 536 aa15.72■□□□□ 0.11
LMX1B-204ENST00000561065 RHDQ02161 417 aa15.72■□□□□ 0.11
LMX1B-204ENST00000561065 PTPRCAPQ14761 206 aa15.72■□□□□ 0.11
LMX1B-204ENST00000561065 KIR2DS5Q14953 304 aa15.72■□□□□ 0.11
LMX1B-204ENST00000561065 INSCQ1MX18 579 aa15.72■□□□□ 0.11
LMX1B-204ENST00000561065 CCDC81Q6ZN84 652 aa15.72■□□□□ 0.11
LMX1B-204ENST00000561065 LRRTM4Q86VH4 590 aa15.72■□□□□ 0.11
LMX1B-204ENST00000561065 OR10G6Q8NH81 332 aa15.72■□□□□ 0.11
LMX1B-204ENST00000561065 BLOC1S5Q8TDH9 187 aa15.72■□□□□ 0.11
LMX1B-204ENST00000561065 TIMM29Q9BSF4 260 aa15.72■□□□□ 0.11
LMX1B-204ENST00000561065 WDR70Q9NW82 654 aa15.72■□□□□ 0.11
LMX1B-204ENST00000561065 OGFRQ9NZT2 677 aa15.72■□□□□ 0.11
LMX1B-204ENST00000561065 ZNF624Q9P2J8 865 aaPredicted RBP15.72■□□□□ 0.11
LMX1B-204ENST00000561065 CPNE7Q9UBL6 633 aa15.72■□□□□ 0.11
LMX1B-204ENST00000561065 TRIM10Q9UDY6 481 aa15.72■□□□□ 0.11
LMX1B-204ENST00000561065 FEZ2Q9UHY8 353 aaPredicted RBP15.72■□□□□ 0.11
LMX1B-204ENST00000561065 DNAJC16Q9Y2G8 782 aa15.72■□□□□ 0.11
LMX1B-204ENST00000561065 B3GALT1Q9Y5Z6 326 aa15.72■□□□□ 0.11
LMX1B-204ENST00000561065 PIEZO2Q9H5I5 2752 aa15.72■□□□□ 0.11
LMX1B-204ENST00000561065 LILRA5A6NI73 299 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms