RNA–Protein interactions for RNA: ENST00000560959.5

TPM1-226, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-226ENST00000560959 TIGD7Q6NT04 549 aaPredicted RBP18.22■□□□□ 0.51
TPM1-226ENST00000560959 PWWP2BQ6NUJ5 590 aa18.22■□□□□ 0.51
TPM1-226ENST00000560959 ZNF517Q6ZMY9 492 aaPredicted RBP18.22■□□□□ 0.51
TPM1-226ENST00000560959 KMT5CQ86Y97 462 aa18.22■□□□□ 0.51
TPM1-226ENST00000560959 ANKRD20A12PQ8NF67 263 aa18.22■□□□□ 0.51
TPM1-226ENST00000560959 ARRDC2Q8TBH0 407 aa18.22■□□□□ 0.51
TPM1-226ENST00000560959 TEKT4Q8WW24 435 aa18.22■□□□□ 0.51
TPM1-226ENST00000560959 RSC1A1Q92681 617 aa18.22■□□□□ 0.51
TPM1-226ENST00000560959 RNF31Q96EP0 1072 aa18.22■□□□□ 0.51
TPM1-226ENST00000560959 ZSCAN5AQ9BUG6 496 aa18.22■□□□□ 0.51
TPM1-226ENST00000560959 MLPHQ9BV36 600 aaPredicted RBP18.22■□□□□ 0.51
TPM1-226ENST00000560959 OR2AG1Q9H205 316 aa18.22■□□□□ 0.51
TPM1-226ENST00000560959 AKIRIN1Q9H9L7 192 aaPredicted RBP18.22■□□□□ 0.51
TPM1-226ENST00000560959 MRPL47Q9HD33 250 aaKnown RBP18.22■□□□□ 0.51
TPM1-226ENST00000560959 SLAMF7Q9NQ25 335 aa18.22■□□□□ 0.51
TPM1-226ENST00000560959 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.22■□□□□ 0.51
TPM1-226ENST00000560959 SLC23A2Q9UGH3 650 aa18.22■□□□□ 0.51
TPM1-226ENST00000560959 LIMA1Q9UHB6 759 aaKnown RBP18.22■□□□□ 0.51
TPM1-226ENST00000560959 TEP1Q99973 2627 aaKnown RBP18.21■□□□□ 0.51
TPM1-226ENST00000560959 ANKRD66B4E2M5 251 aa18.21■□□□□ 0.51
TPM1-226ENST00000560959 LDLRP01130 860 aa18.21■□□□□ 0.51
TPM1-226ENST00000560959 JCHAINP01591 159 aa18.21■□□□□ 0.51
TPM1-226ENST00000560959 FTLP02792 175 aaPredicted RBP18.21■□□□□ 0.51
TPM1-226ENST00000560959 RARAP10276 462 aa18.21■□□□□ 0.51
TPM1-226ENST00000560959 BRAFP15056 766 aa18.21■□□□□ 0.51
TPM1-226ENST00000560959 FOLR1P15328 257 aa18.21■□□□□ 0.51
TPM1-226ENST00000560959 ZNF7P17097 686 aaPredicted RBP18.21■□□□□ 0.51
TPM1-226ENST00000560959 CCNCP24863 283 aa18.21■□□□□ 0.51
TPM1-226ENST00000560959 DSC2Q02487 901 aa18.21■□□□□ 0.51
TPM1-226ENST00000560959 UBXN1Q04323 297 aa18.21■□□□□ 0.51
TPM1-226ENST00000560959 GPR18Q14330 331 aa18.21■□□□□ 0.51
TPM1-226ENST00000560959 INSCQ1MX18 579 aa18.21■□□□□ 0.51
TPM1-226ENST00000560959 SMTNL2Q2TAL5 461 aa18.21■□□□□ 0.51
TPM1-226ENST00000560959 IZUMO3Q5VZ72 239 aa18.21■□□□□ 0.51
TPM1-226ENST00000560959 CPZQ66K79 652 aa18.21■□□□□ 0.51
TPM1-226ENST00000560959 FAM92BQ6ZTR7 304 aa18.21■□□□□ 0.51
TPM1-226ENST00000560959 ADGRG6Q86SQ4 1221 aa18.21■□□□□ 0.51
TPM1-226ENST00000560959 LRRTM4Q86VH4 590 aa18.21■□□□□ 0.51
TPM1-226ENST00000560959 RHOT1Q8IXI2 618 aa18.21■□□□□ 0.51
TPM1-226ENST00000560959 Q8NA96 180 aa18.21■□□□□ 0.51
TPM1-226ENST00000560959 SIDT2Q8NBJ9 832 aaKnown RBP18.21■□□□□ 0.51
TPM1-226ENST00000560959 LPCAT1Q8NF37 534 aa18.21■□□□□ 0.51
TPM1-226ENST00000560959 PRR7Q8TB68 274 aa18.21■□□□□ 0.51
TPM1-226ENST00000560959 HSPH1Q92598 858 aa18.21■□□□□ 0.51
TPM1-226ENST00000560959 PNPLA2Q96AD5 504 aa18.21■□□□□ 0.51
TPM1-226ENST00000560959 PCDH18Q9HCL0 1135 aa18.21■□□□□ 0.51
TPM1-226ENST00000560959 RAD18Q9NS91 495 aa18.21■□□□□ 0.51
TPM1-226ENST00000560959 FANCLQ9NW38 375 aa18.21■□□□□ 0.51
TPM1-226ENST00000560959 RBM22Q9NW64 420 aaKnown RBP eCLIP18.21■□□□□ 0.51
TPM1-226ENST00000560959 G3BP2Q9UN86 482 aaKnown RBP18.21■□□□□ 0.51
TPM1-226ENST00000560959 LRBAP50851 2863 aa18.2■□□□□ 0.5
TPM1-226ENST00000560959 ARGFXA6NJG6 315 aa18.2■□□□□ 0.5
TPM1-226ENST00000560959 PDZK1P1A8MUH7 402 aa18.2■□□□□ 0.5
TPM1-226ENST00000560959 IDSP22304 550 aa18.2■□□□□ 0.5
TPM1-226ENST00000560959 COL8A1P27658 744 aa18.2■□□□□ 0.5
TPM1-226ENST00000560959 DCDC1P59894 354 aa18.2■□□□□ 0.5
TPM1-226ENST00000560959 GALNT2Q10471 571 aa18.2■□□□□ 0.5
TPM1-226ENST00000560959 MRPL49Q13405 166 aaKnown RBP18.2■□□□□ 0.5
TPM1-226ENST00000560959 PIGHQ14442 188 aaPredicted RBP18.2■□□□□ 0.5
TPM1-226ENST00000560959 QPCTQ16769 361 aa18.2■□□□□ 0.5
TPM1-226ENST00000560959 TDRD12Q587J7 1177 aaKnown RBP18.2■□□□□ 0.5
TPM1-226ENST00000560959 ZNF569Q5MCW4 686 aa18.2■□□□□ 0.5
TPM1-226ENST00000560959 IRGCQ6NXR0 463 aa18.2■□□□□ 0.5
TPM1-226ENST00000560959 FAM199XQ6PEV8 388 aaPredicted RBP18.2■□□□□ 0.5
TPM1-226ENST00000560959 KLHL35Q6PF15 583 aa18.2■□□□□ 0.5
TPM1-226ENST00000560959 TRIM11Q96F44 468 aa18.2■□□□□ 0.5
TPM1-226ENST00000560959 ZNF514Q96K75 400 aaPredicted RBP18.2■□□□□ 0.5
TPM1-226ENST00000560959 TSGA13Q96PP4 275 aa18.2■□□□□ 0.5
TPM1-226ENST00000560959 RUFY1Q96T51 708 aa18.2■□□□□ 0.5
TPM1-226ENST00000560959 SPATA16Q9BXB7 569 aa18.2■□□□□ 0.5
TPM1-226ENST00000560959 NUP62CLQ9H1M0 184 aa18.2■□□□□ 0.5
TPM1-226ENST00000560959 NFKBIL1Q9UBC1 381 aaPredicted RBP18.2■□□□□ 0.5
TPM1-226ENST00000560959 IGHV5-51A0A0C4DH38 117 aa18.19■□□□□ 0.5
TPM1-226ENST00000560959 VEGFDO43915 354 aa18.19■□□□□ 0.5
TPM1-226ENST00000560959 KCNJ13O60928 360 aa18.19■□□□□ 0.5
TPM1-226ENST00000560959 CPNE3O75131 537 aaKnown RBP18.19■□□□□ 0.5
TPM1-226ENST00000560959 MYBL1P10243 752 aa18.19■□□□□ 0.5
TPM1-226ENST00000560959 IL4RP24394 825 aa18.19■□□□□ 0.5
TPM1-226ENST00000560959 RPS18P62269 152 aaKnown RBP18.19■□□□□ 0.5
TPM1-226ENST00000560959 NIPAL4Q0D2K0 466 aa18.19■□□□□ 0.5
TPM1-226ENST00000560959 CHAF1BQ13112 559 aa18.19■□□□□ 0.5
TPM1-226ENST00000560959 IL10RAQ13651 578 aa18.19■□□□□ 0.5
TPM1-226ENST00000560959 CCDC122Q5T0U0 273 aa18.19■□□□□ 0.5
TPM1-226ENST00000560959 TRAM1L1Q8N609 369 aa18.19■□□□□ 0.5
TPM1-226ENST00000560959 OR8K5Q8NH50 307 aa18.19■□□□□ 0.5
TPM1-226ENST00000560959 FAM71BQ8TC56 605 aa18.19■□□□□ 0.5
TPM1-226ENST00000560959 ADAMTS17Q8TE56 1095 aa18.19■□□□□ 0.5
TPM1-226ENST00000560959 GLYATL1Q969I3 302 aa18.19■□□□□ 0.5
TPM1-226ENST00000560959 EID2BQ96D98 161 aa18.19■□□□□ 0.5
TPM1-226ENST00000560959 CXorf40BQ96DE9 158 aa18.19■□□□□ 0.5
TPM1-226ENST00000560959 LRFN5Q96NI6 719 aa18.19■□□□□ 0.5
TPM1-226ENST00000560959 CD180Q99467 661 aa18.19■□□□□ 0.5
TPM1-226ENST00000560959 ADGRE3Q9BY15 652 aa18.19■□□□□ 0.5
TPM1-226ENST00000560959 ZFYVE1Q9HBF4 777 aa18.19■□□□□ 0.5
TPM1-226ENST00000560959 ERRFI1Q9UJM3 462 aaPredicted RBP18.19■□□□□ 0.5
TPM1-226ENST00000560959 HIVEP3Q5T1R4 2406 aa18.19■□□□□ 0.5
TPM1-226ENST00000560959 MED13Q9UHV7 2174 aa18.18■□□□□ 0.5
TPM1-226ENST00000560959 RAB40ALP0C0E4 278 aa18.18■□□□□ 0.5
TPM1-226ENST00000560959 TCF4P15884 667 aa18.18■□□□□ 0.5
TPM1-226ENST00000560959 FECHP22830 423 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms