RNA–Protein interactions for RNA: ENST00000560637.5

VPS13C-209, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

TSL 1 (best)

Gene VPS13C, Length 3,684 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-209ENST00000560637 SERPINB5P36952 375 aa5.39□□□□□ -1.55
VPS13C-209ENST00000560637 CXCL12P48061 93 aa5.39□□□□□ -1.55
VPS13C-209ENST00000560637 AQP5P55064 265 aa5.39□□□□□ -1.55
VPS13C-209ENST00000560637 TAGLNQ01995 201 aaKnown RBP5.39□□□□□ -1.55
VPS13C-209ENST00000560637 CACNG1Q06432 222 aa5.39□□□□□ -1.55
VPS13C-209ENST00000560637 ART3Q13508 389 aa5.39□□□□□ -1.55
VPS13C-209ENST00000560637 CAPRIN1Q14444 709 aaKnown RBP5.39□□□□□ -1.55
VPS13C-209ENST00000560637 TAF1AQ15573 450 aaPredicted RBP5.39□□□□□ -1.55
VPS13C-209ENST00000560637 KIAA1211LQ6NV74 962 aa5.39□□□□□ -1.55
VPS13C-209ENST00000560637 DRICH1Q6PGQ1 229 aaPredicted RBP5.39□□□□□ -1.55
VPS13C-209ENST00000560637 LRIG3Q6UXM1 1119 aa5.39□□□□□ -1.55
VPS13C-209ENST00000560637 ARCQ7LC44 396 aa5.39□□□□□ -1.55
VPS13C-209ENST00000560637 FAM129CQ86XR2 697 aa5.39□□□□□ -1.55
VPS13C-209ENST00000560637 PLD3Q8IV08 490 aa5.39□□□□□ -1.55
VPS13C-209ENST00000560637 MIER2Q8N344 545 aa5.39□□□□□ -1.55
VPS13C-209ENST00000560637 RIN3Q8TB24 985 aa5.39□□□□□ -1.55
VPS13C-209ENST00000560637 NT5C3BQ969T7 300 aa5.39□□□□□ -1.55
VPS13C-209ENST00000560637 RELTQ969Z4 430 aa5.39□□□□□ -1.55
VPS13C-209ENST00000560637 ZNF599Q96NL3 588 aa5.39□□□□□ -1.55
VPS13C-209ENST00000560637 CDK15Q96Q40 435 aa5.39□□□□□ -1.55
VPS13C-209ENST00000560637 FAM126AQ9BYI3 521 aaPredicted RBP5.39□□□□□ -1.55
VPS13C-209ENST00000560637 RHOJQ9H4E5 214 aa5.39□□□□□ -1.55
VPS13C-209ENST00000560637 TMEM216Q9P0N5 145 aa5.39□□□□□ -1.55
VPS13C-209ENST00000560637 RABGEF1Q9UJ41 708 aa5.39□□□□□ -1.55
VPS13C-209ENST00000560637 PACSIN3Q9UKS6 424 aa5.39□□□□□ -1.55
VPS13C-209ENST00000560637 DYRK1BQ9Y463 629 aa5.39□□□□□ -1.55
VPS13C-209ENST00000560637 FAM237BA0A1B0GVD1 139 aa5.39□□□□□ -1.55
VPS13C-209ENST00000560637 AIM2O14862 343 aa5.39□□□□□ -1.55
VPS13C-209ENST00000560637 RAD51BO15315 384 aa5.39□□□□□ -1.55
VPS13C-209ENST00000560637 MBTPS2O43462 519 aa5.39□□□□□ -1.55
VPS13C-209ENST00000560637 ATG13O75143 517 aa5.39□□□□□ -1.55
VPS13C-209ENST00000560637 LTA4HP09960 611 aaKnown RBP5.39□□□□□ -1.55
VPS13C-209ENST00000560637 ENO3P13929 434 aaPredicted RBP5.39□□□□□ -1.55
VPS13C-209ENST00000560637 EFNA1P20827 205 aaPredicted RBP5.39□□□□□ -1.55
VPS13C-209ENST00000560637 CES1P23141 567 aa5.39□□□□□ -1.55
VPS13C-209ENST00000560637 AK4P27144 223 aaPredicted RBP5.39□□□□□ -1.55
VPS13C-209ENST00000560637 VIPR1P32241 457 aa5.39□□□□□ -1.55
VPS13C-209ENST00000560637 CSNK1EP49674 416 aaKnown RBP5.39□□□□□ -1.55
VPS13C-209ENST00000560637 SEPHS1P49903 392 aa5.39□□□□□ -1.55
VPS13C-209ENST00000560637 INO80DQ53TQ3 878 aaPredicted RBP5.39□□□□□ -1.55
VPS13C-209ENST00000560637 ANKS6Q68DC2 871 aa5.39□□□□□ -1.55
VPS13C-209ENST00000560637 MBOAT1Q6ZNC8 495 aa5.39□□□□□ -1.55
VPS13C-209ENST00000560637 HSD11B1LQ7Z5J1 315 aa5.39□□□□□ -1.55
VPS13C-209ENST00000560637 TMPRSS11BQ86T26 416 aa5.39□□□□□ -1.55
VPS13C-209ENST00000560637 C10orf107Q8IVU9 208 aa5.39□□□□□ -1.55
VPS13C-209ENST00000560637 PIANPQ8IYJ0 282 aa5.39□□□□□ -1.55
VPS13C-209ENST00000560637 POU5F2Q8N7G0 328 aa5.39□□□□□ -1.55
VPS13C-209ENST00000560637 CLHC1Q8NHS4 586 aa5.39□□□□□ -1.55
VPS13C-209ENST00000560637 OLIG1Q8TAK6 271 aa5.39□□□□□ -1.55
VPS13C-209ENST00000560637 COL26A1Q96A83 441 aa5.39□□□□□ -1.55
VPS13C-209ENST00000560637 GRAMD1AQ96CP6 724 aa5.39□□□□□ -1.55
VPS13C-209ENST00000560637 VWCEQ96DN2 955 aa5.39□□□□□ -1.55
VPS13C-209ENST00000560637 IL17FQ96PD4 163 aa5.39□□□□□ -1.55
VPS13C-209ENST00000560637 TSGA13Q96PP4 275 aa5.39□□□□□ -1.55
VPS13C-209ENST00000560637 CCT8L2Q96SF2 557 aa5.39□□□□□ -1.55
VPS13C-209ENST00000560637 ARMCX1Q9P291 453 aa5.39□□□□□ -1.55
VPS13C-209ENST00000560637 OPTCQ9UBM4 332 aa5.39□□□□□ -1.55
VPS13C-209ENST00000560637 DCDC2Q9UHG0 476 aa5.39□□□□□ -1.55
VPS13C-209ENST00000560637 BAIAP2L1Q9UHR4 511 aa5.39□□□□□ -1.55
VPS13C-209ENST00000560637 DRGXA6NNA5 263 aa5.39□□□□□ -1.55
VPS13C-209ENST00000560637 CDC7O00311 574 aa5.39□□□□□ -1.55
VPS13C-209ENST00000560637 TSPAN6O43657 245 aa5.39□□□□□ -1.55
VPS13C-209ENST00000560637 TRIM13O60858 407 aa5.39□□□□□ -1.55
VPS13C-209ENST00000560637 SEMA4FO95754 770 aa5.39□□□□□ -1.55
VPS13C-209ENST00000560637 RBP1P09455 135 aa5.39□□□□□ -1.55
VPS13C-209ENST00000560637 ZDHHC11BP0C7U3 371 aa5.39□□□□□ -1.55
VPS13C-209ENST00000560637 BPIP17213 487 aa5.39□□□□□ -1.55
VPS13C-209ENST00000560637 IDSP22304 550 aa5.39□□□□□ -1.55
VPS13C-209ENST00000560637 HOXC13P31276 330 aa5.39□□□□□ -1.55
VPS13C-209ENST00000560637 BDKRB1P46663 353 aa5.39□□□□□ -1.55
VPS13C-209ENST00000560637 CLCN5P51795 746 aa5.39□□□□□ -1.55
VPS13C-209ENST00000560637 SKOR1P84550 965 aa5.39□□□□□ -1.55
VPS13C-209ENST00000560637 EIF4HQ15056 248 aaKnown RBP5.39□□□□□ -1.55
VPS13C-209ENST00000560637 MLF2Q15773 248 aaPredicted RBP5.39□□□□□ -1.55
VPS13C-209ENST00000560637 IER5LQ5T953 404 aa5.39□□□□□ -1.55
VPS13C-209ENST00000560637 GPR153Q6NV75 609 aa5.39□□□□□ -1.55
VPS13C-209ENST00000560637 DUS1LQ6P1R4 473 aaKnown RBP5.39□□□□□ -1.55
VPS13C-209ENST00000560637 AMZ2Q86W34 360 aa5.39□□□□□ -1.55
VPS13C-209ENST00000560637 RNF148Q8N7C7 305 aa5.39□□□□□ -1.55
VPS13C-209ENST00000560637 MDGA1Q8NFP4 955 aa5.39□□□□□ -1.55
VPS13C-209ENST00000560637 HEXDCQ8WVB3 486 aa5.39□□□□□ -1.55
VPS13C-209ENST00000560637 ASZ1Q8WWH4 475 aa5.39□□□□□ -1.55
VPS13C-209ENST00000560637 FOXJ1Q92949 421 aa5.39□□□□□ -1.55
VPS13C-209ENST00000560637 KCNN1Q92952 543 aa5.39□□□□□ -1.55
VPS13C-209ENST00000560637 ERP27Q96DN0 273 aa5.39□□□□□ -1.55
VPS13C-209ENST00000560637 OLFM3Q96PB7 478 aa5.39□□□□□ -1.55
VPS13C-209ENST00000560637 CENPKQ9BS16 269 aa5.39□□□□□ -1.55
VPS13C-209ENST00000560637 C1orf50Q9BV19 199 aa5.39□□□□□ -1.55
VPS13C-209ENST00000560637 ILKAPQ9H0C8 392 aaPredicted RBP5.39□□□□□ -1.55
VPS13C-209ENST00000560637 COG4Q9H9E3 785 aa5.39□□□□□ -1.55
VPS13C-209ENST00000560637 ADA2Q9NZK5 511 aa5.39□□□□□ -1.55
VPS13C-209ENST00000560637 CLEC1BQ9P126 229 aa5.39□□□□□ -1.55
VPS13C-209ENST00000560637 ZFP69BQ9UJL9 534 aa5.39□□□□□ -1.55
VPS13C-209ENST00000560637 TMEM265A0A087WTH1 108 aa5.38□□□□□ -1.55
VPS13C-209ENST00000560637 OR52A4PA6NMU1 304 aa5.38□□□□□ -1.55
VPS13C-209ENST00000560637 SAP18O00422 153 aaKnown RBP5.38□□□□□ -1.55
VPS13C-209ENST00000560637 MAN2B1O00754 1011 aa5.38□□□□□ -1.55
VPS13C-209ENST00000560637 LRATO95237 230 aa5.38□□□□□ -1.55
VPS13C-209ENST00000560637 FTH1P02794 183 aa5.38□□□□□ -1.55
VPS13C-209ENST00000560637 ANXA5P08758 320 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms