RNA–Protein interactions for RNA: ENST00000560462.1

HERC1-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 647 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-208ENST00000560462 PASD1Q8IV76 773 aa6.33□□□□□ -1.4
HERC1-208ENST00000560462 LGI2Q8N0V4 545 aa6.33□□□□□ -1.4
HERC1-208ENST00000560462 PLD6Q8N2A8 252 aaKnown RBP6.33□□□□□ -1.4
HERC1-208ENST00000560462 CATSPER1Q8NEC5 780 aa6.33□□□□□ -1.4
HERC1-208ENST00000560462 MYRIPQ8NFW9 859 aa6.33□□□□□ -1.4
HERC1-208ENST00000560462 LILRB4Q8NHJ6 448 aa6.33□□□□□ -1.4
HERC1-208ENST00000560462 CXorf40AQ8TE69 158 aa6.33□□□□□ -1.4
HERC1-208ENST00000560462 AGAP11Q8TF27 550 aa6.33□□□□□ -1.4
HERC1-208ENST00000560462 C9orf72Q96LT7 481 aa6.33□□□□□ -1.4
HERC1-208ENST00000560462 AGAP4Q96P64 663 aa6.33□□□□□ -1.4
HERC1-208ENST00000560462 VKORC1Q9BQB6 163 aa6.33□□□□□ -1.4
HERC1-208ENST00000560462 REEP2Q9BRK0 252 aa6.33□□□□□ -1.4
HERC1-208ENST00000560462 MMTAG2Q9BU76 263 aaKnown RBP6.33□□□□□ -1.4
HERC1-208ENST00000560462 UCK2Q9BZX2 261 aa6.33□□□□□ -1.4
HERC1-208ENST00000560462 SUDS3Q9H7L9 328 aaPredicted RBP6.33□□□□□ -1.4
HERC1-208ENST00000560462 PARVGQ9HBI0 331 aa6.33□□□□□ -1.4
HERC1-208ENST00000560462 GP6Q9HCN6 339 aa6.33□□□□□ -1.4
HERC1-208ENST00000560462 WASH6PQ9NQA3 447 aa6.33□□□□□ -1.4
HERC1-208ENST00000560462 PRR13Q9NZ81 148 aa6.33□□□□□ -1.4
HERC1-208ENST00000560462 HECAQ9UBI9 543 aaPredicted RBP6.33□□□□□ -1.4
HERC1-208ENST00000560462 L3MBTL1Q9Y468 752 aa6.33□□□□□ -1.4
HERC1-208ENST00000560462 MYH11P35749 1972 aa6.33□□□□□ -1.4
HERC1-208ENST00000560462 PRSS38A1L453 326 aa6.32□□□□□ -1.4
HERC1-208ENST00000560462 C16orf96A6NNT2 1141 aa6.32□□□□□ -1.4
HERC1-208ENST00000560462 M0R082 166 aa6.32□□□□□ -1.4
HERC1-208ENST00000560462 AREL1O15033 823 aa6.32□□□□□ -1.4
HERC1-208ENST00000560462 SHOXO15266 292 aa6.32□□□□□ -1.4
HERC1-208ENST00000560462 TOX3O15405 576 aaPredicted RBP6.32□□□□□ -1.4
HERC1-208ENST00000560462 TBX1O43435 398 aa6.32□□□□□ -1.4
HERC1-208ENST00000560462 RASSF9O75901 435 aa6.32□□□□□ -1.4
HERC1-208ENST00000560462 ENDOD1O94919 500 aa6.32□□□□□ -1.4
HERC1-208ENST00000560462 ZBED1O96006 694 aa6.32□□□□□ -1.4
HERC1-208ENST00000560462 ERBB2P04626 1255 aa6.32□□□□□ -1.4
HERC1-208ENST00000560462 PCCBP05166 539 aa6.32□□□□□ -1.4
HERC1-208ENST00000560462 SCG5P05408 212 aa6.32□□□□□ -1.4
HERC1-208ENST00000560462 KLK3P07288 261 aaPredicted RBP6.32□□□□□ -1.4
HERC1-208ENST00000560462 CPA1P15085 419 aa6.32□□□□□ -1.4
HERC1-208ENST00000560462 GSPT1P15170 499 aaKnown RBP6.32□□□□□ -1.4
HERC1-208ENST00000560462 NAT1P18440 290 aa6.32□□□□□ -1.4
HERC1-208ENST00000560462 CD58P19256 250 aa6.32□□□□□ -1.4
HERC1-208ENST00000560462 RRM1P23921 792 aa6.32□□□□□ -1.4
HERC1-208ENST00000560462 AK4P27144 223 aaPredicted RBP6.32□□□□□ -1.4
HERC1-208ENST00000560462 GFERP55789 205 aa6.32□□□□□ -1.4
HERC1-208ENST00000560462 GFRA1P56159 465 aa6.32□□□□□ -1.4
HERC1-208ENST00000560462 MYL6P60660 151 aa6.32□□□□□ -1.4
HERC1-208ENST00000560462 SRSF2Q01130 221 aaKnown RBP6.32□□□□□ -1.4
HERC1-208ENST00000560462 ITKQ08881 620 aa6.32□□□□□ -1.4
HERC1-208ENST00000560462 TUBB3Q13509 450 aa6.32□□□□□ -1.4
HERC1-208ENST00000560462 CATSPEREQ5SY80 951 aa6.32□□□□□ -1.4
HERC1-208ENST00000560462 PRAMEF13Q5VWM6 474 aa6.32□□□□□ -1.4
HERC1-208ENST00000560462 KRT79Q5XKE5 535 aa6.32□□□□□ -1.4
HERC1-208ENST00000560462 CXorf57Q6NSI4 855 aaKnown RBP6.32□□□□□ -1.4
HERC1-208ENST00000560462 C22orf39Q6P5X5 142 aa6.32□□□□□ -1.4
HERC1-208ENST00000560462 CPLX2Q6PUV4 134 aaKnown RBP6.32□□□□□ -1.4
HERC1-208ENST00000560462 C3P1Q6ZMU1 363 aa6.32□□□□□ -1.4
HERC1-208ENST00000560462 YTHDF3Q7Z739 585 aaKnown RBP6.32□□□□□ -1.4
HERC1-208ENST00000560462 CHD1LQ86WJ1 897 aa6.32□□□□□ -1.4
HERC1-208ENST00000560462 CXorf67Q86X51 503 aaPredicted RBP6.32□□□□□ -1.4
HERC1-208ENST00000560462 EID3Q8N140 333 aa6.32□□□□□ -1.4
HERC1-208ENST00000560462 CCAR2Q8N163 923 aaKnown RBP6.32□□□□□ -1.4
HERC1-208ENST00000560462 ZNF417Q8TAU3 575 aa6.32□□□□□ -1.4
HERC1-208ENST00000560462 PLEKHO2Q8TD55 490 aa6.32□□□□□ -1.4
HERC1-208ENST00000560462 ASB5Q8WWX0 329 aa6.32□□□□□ -1.4
HERC1-208ENST00000560462 CYFIP2Q96F07 1278 aa6.32□□□□□ -1.4
HERC1-208ENST00000560462 ALG14Q96F25 216 aa6.32□□□□□ -1.4
HERC1-208ENST00000560462 DMRTA2Q96SC8 542 aa6.32□□□□□ -1.4
HERC1-208ENST00000560462 ZNF587Q96SQ5 575 aaPredicted RBP6.32□□□□□ -1.4
HERC1-208ENST00000560462 WRAP53Q9BUR4 548 aaKnown RBP6.32□□□□□ -1.4
HERC1-208ENST00000560462 ZNF700Q9H0M5 742 aa6.32□□□□□ -1.4
HERC1-208ENST00000560462 IFT22Q9H7X7 185 aa6.32□□□□□ -1.4
HERC1-208ENST00000560462 CARS2Q9HA77 564 aaKnown RBP6.32□□□□□ -1.4
HERC1-208ENST00000560462 ZIM2Q9NZV7 527 aa6.32□□□□□ -1.4
HERC1-208ENST00000560462 HMGXB4Q9UGU5 601 aa6.32□□□□□ -1.4
HERC1-208ENST00000560462 RARRES3Q9UL19 164 aa6.32□□□□□ -1.4
HERC1-208ENST00000560462 GTF3C1Q12789 2109 aa6.32□□□□□ -1.4
HERC1-208ENST00000560462 PIKFYVEQ9Y2I7 2098 aa6.32□□□□□ -1.4
HERC1-208ENST00000560462 HCFC1P51610 2035 aa6.32□□□□□ -1.4
HERC1-208ENST00000560462 TCRBV16S1A1N1A0A5B0 115 aa6.31□□□□□ -1.4
HERC1-208ENST00000560462 A6NNC1 897 aa6.31□□□□□ -1.4
HERC1-208ENST00000560462 SMAD6O43541 496 aaKnown RBP6.31□□□□□ -1.4
HERC1-208ENST00000560462 KLK8O60259 260 aa6.31□□□□□ -1.4
HERC1-208ENST00000560462 SHOX2O60902 331 aaPredicted RBP6.31□□□□□ -1.4
HERC1-208ENST00000560462 CPP00450 1065 aa6.31□□□□□ -1.4
HERC1-208ENST00000560462 C9P02748 559 aa6.31□□□□□ -1.4
HERC1-208ENST00000560462 LTFP02788 710 aa6.31□□□□□ -1.4
HERC1-208ENST00000560462 MYL1P05976 194 aa6.31□□□□□ -1.4
HERC1-208ENST00000560462 CHRNB4P30926 498 aa6.31□□□□□ -1.4
HERC1-208ENST00000560462 ATICP31939 592 aa6.31□□□□□ -1.4
HERC1-208ENST00000560462 ZNF131P52739 623 aa6.31□□□□□ -1.4
HERC1-208ENST00000560462 GPS2Q13227 327 aa6.31□□□□□ -1.4
HERC1-208ENST00000560462 NFATC2Q13469 925 aa6.31□□□□□ -1.4
HERC1-208ENST00000560462 MTM1Q13496 603 aa6.31□□□□□ -1.4
HERC1-208ENST00000560462 TRPC3Q13507 836 aa6.31□□□□□ -1.4
HERC1-208ENST00000560462 KRT32Q14532 448 aa6.31□□□□□ -1.4
HERC1-208ENST00000560462 SURF1Q15526 300 aa6.31□□□□□ -1.4
HERC1-208ENST00000560462 ZRSR1Q15695 479 aaKnown RBP6.31□□□□□ -1.4
HERC1-208ENST00000560462 LRRC73Q5JTD7 316 aa6.31□□□□□ -1.4
HERC1-208ENST00000560462 IRAK1BP1Q5VVH5 260 aa6.31□□□□□ -1.4
HERC1-208ENST00000560462 BSPRYQ5W0U4 402 aa6.31□□□□□ -1.4
HERC1-208ENST00000560462 FGD2Q7Z6J4 655 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms