RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 XKR4Q5GH76 650 aa13.36□□□□□ -0.27
TRAF3-208ENST00000560371 RSBN1Q5VWQ0 802 aaPredicted RBP13.36□□□□□ -0.27
TRAF3-208ENST00000560371 SPATA19Q7Z5L4 167 aa13.36□□□□□ -0.27
TRAF3-208ENST00000560371 CUZD1Q86UP6 607 aa13.36□□□□□ -0.27
TRAF3-208ENST00000560371 EGFL7Q9UHF1 273 aa13.36□□□□□ -0.27
TRAF3-208ENST00000560371 HSPA7P48741 367 aa13.36□□□□□ -0.27
TRAF3-208ENST00000560371 LARS2Q15031 903 aaKnown RBP13.36□□□□□ -0.27
TRAF3-208ENST00000560371 ADGRF1Q5T601 910 aa13.36□□□□□ -0.27
TRAF3-208ENST00000560371 ATXN7L2Q5T6C5 722 aaPredicted RBP13.36□□□□□ -0.27
TRAF3-208ENST00000560371 MED27Q6P2C8 311 aa13.36□□□□□ -0.27
TRAF3-208ENST00000560371 ZCCHC7Q8N3Z6 543 aaKnown RBP13.36□□□□□ -0.27
TRAF3-208ENST00000560371 TFAP2BQ92481 460 aa13.36□□□□□ -0.27
TRAF3-208ENST00000560371 ZFRQ96KR1 1074 aaKnown RBP13.36□□□□□ -0.27
TRAF3-208ENST00000560371 GMFGO60234 142 aa13.36□□□□□ -0.27
TRAF3-208ENST00000560371 SNX3O60493 162 aa13.36□□□□□ -0.27
TRAF3-208ENST00000560371 PRR5P85299 388 aa13.36□□□□□ -0.27
TRAF3-208ENST00000560371 SH3D19Q5HYK7 790 aa13.36□□□□□ -0.27
TRAF3-208ENST00000560371 CTU1Q7Z7A3 348 aaKnown RBP13.36□□□□□ -0.27
TRAF3-208ENST00000560371 SLC43A3Q8NBI5 491 aa13.36□□□□□ -0.27
TRAF3-208ENST00000560371 TSC22D4Q9Y3Q8 395 aa13.36□□□□□ -0.27
TRAF3-208ENST00000560371 ZNF536O15090 1300 aa13.36□□□□□ -0.27
TRAF3-208ENST00000560371 C2CD4BA6NLJ0 364 aa13.35□□□□□ -0.27
TRAF3-208ENST00000560371 SAGP10523 405 aaPredicted RBP13.35□□□□□ -0.27
TRAF3-208ENST00000560371 DDX6P26196 483 aaKnown RBP eCLIP13.35□□□□□ -0.27
TRAF3-208ENST00000560371 BNIP2Q12982 314 aa13.35□□□□□ -0.27
TRAF3-208ENST00000560371 TRIM25Q14258 630 aaKnown RBP13.35□□□□□ -0.27
TRAF3-208ENST00000560371 LRRC73Q5JTD7 316 aa13.35□□□□□ -0.27
TRAF3-208ENST00000560371 HMGB3O15347 200 aaKnown RBP13.35□□□□□ -0.27
TRAF3-208ENST00000560371 KIF1CO43896 1103 aaKnown RBP13.35□□□□□ -0.27
TRAF3-208ENST00000560371 IFNGP01579 166 aa13.35□□□□□ -0.27
TRAF3-208ENST00000560371 APLP1P51693 650 aa13.35□□□□□ -0.27
TRAF3-208ENST00000560371 RPS24P62847 133 aaKnown RBP13.35□□□□□ -0.27
TRAF3-208ENST00000560371 AMZ1Q400G9 498 aa13.35□□□□□ -0.27
TRAF3-208ENST00000560371 SUSD3Q96L08 255 aa13.35□□□□□ -0.27
TRAF3-208ENST00000560371 C5orf34Q96MH7 638 aa13.35□□□□□ -0.27
TRAF3-208ENST00000560371 MTRRQ9UBK8 725 aa13.35□□□□□ -0.27
TRAF3-208ENST00000560371 DHRS12A0PJE2 317 aa13.35□□□□□ -0.27
TRAF3-208ENST00000560371 TRAFD1O14545 582 aaPredicted RBP13.35□□□□□ -0.27
TRAF3-208ENST00000560371 NUDT17P0C025 328 aa13.35□□□□□ -0.27
TRAF3-208ENST00000560371 VARSP26640 1264 aaKnown RBP13.35□□□□□ -0.27
TRAF3-208ENST00000560371 ALDH4A1P30038 563 aa13.35□□□□□ -0.27
TRAF3-208ENST00000560371 STXBP1P61764 594 aaKnown RBP13.35□□□□□ -0.27
TRAF3-208ENST00000560371 ENPEPQ07075 957 aa13.35□□□□□ -0.27
TRAF3-208ENST00000560371 TAF5Q15542 800 aa13.35□□□□□ -0.27
TRAF3-208ENST00000560371 TMC8Q8IU68 726 aa13.35□□□□□ -0.27
TRAF3-208ENST00000560371 TOR4AQ9NXH8 423 aa13.35□□□□□ -0.27
TRAF3-208ENST00000560371 HCN3Q9P1Z3 774 aa13.35□□□□□ -0.27
TRAF3-208ENST00000560371 TCAF1Q9Y4C2 921 aa13.35□□□□□ -0.27
TRAF3-208ENST00000560371 ADSLP30566 484 aaPredicted RBP13.35□□□□□ -0.27
TRAF3-208ENST00000560371 MPP1Q00013 466 aa13.35□□□□□ -0.27
TRAF3-208ENST00000560371 RFTN1Q14699 578 aaPredicted RBP13.35□□□□□ -0.27
TRAF3-208ENST00000560371 INAVAQ3KP66 663 aa13.35□□□□□ -0.27
TRAF3-208ENST00000560371 UNC5BQ8IZJ1 945 aa13.35□□□□□ -0.27
TRAF3-208ENST00000560371 NXNL1Q96CM4 212 aa13.35□□□□□ -0.27
TRAF3-208ENST00000560371 MFSD3Q96ES6 412 aa13.35□□□□□ -0.27
TRAF3-208ENST00000560371 ZNF184Q99676 751 aaPredicted RBP13.35□□□□□ -0.27
TRAF3-208ENST00000560371 PNPLA8Q9NP80 782 aa13.35□□□□□ -0.27
TRAF3-208ENST00000560371 SLCO1B3Q9NPD5 702 aa13.35□□□□□ -0.27
TRAF3-208ENST00000560371 XPNPEP1Q9NQW7 623 aa13.35□□□□□ -0.27
TRAF3-208ENST00000560371 RBM7Q9Y580 266 aaKnown RBP13.35□□□□□ -0.27
TRAF3-208ENST00000560371 CICQ96RK0 1608 aaPredicted RBP13.35□□□□□ -0.27
TRAF3-208ENST00000560371 A0A0U1RQF3 1178 aa13.35□□□□□ -0.27
TRAF3-208ENST00000560371 MFN2O95140 757 aa13.35□□□□□ -0.27
TRAF3-208ENST00000560371 CRHR1P34998 444 aa13.35□□□□□ -0.27
TRAF3-208ENST00000560371 HEPACAMQ14CZ8 416 aa13.35□□□□□ -0.27
TRAF3-208ENST00000560371 TIGD2Q4W5G0 525 aa13.35□□□□□ -0.27
TRAF3-208ENST00000560371 NOL11Q9H8H0 719 aaKnown RBP13.35□□□□□ -0.27
TRAF3-208ENST00000560371 A0A0J9YYE9 177 aa13.35□□□□□ -0.27
TRAF3-208ENST00000560371 SCAMP1O15126 338 aa13.35□□□□□ -0.27
TRAF3-208ENST00000560371 UGT2B17O75795 530 aa13.35□□□□□ -0.27
TRAF3-208ENST00000560371 ADH5P11766 374 aa13.35□□□□□ -0.27
TRAF3-208ENST00000560371 AQP1P29972 269 aa13.35□□□□□ -0.27
TRAF3-208ENST00000560371 TMEM164Q5U3C3 297 aa13.35□□□□□ -0.27
TRAF3-208ENST00000560371 IRF2BP1Q8IU81 584 aa13.35□□□□□ -0.27
TRAF3-208ENST00000560371 ATP6V1C2Q8NEY4 427 aa13.35□□□□□ -0.27
TRAF3-208ENST00000560371 ENKURQ8TC29 256 aa13.35□□□□□ -0.27
TRAF3-208ENST00000560371 SLC44A1Q8WWI5 657 aa13.35□□□□□ -0.27
TRAF3-208ENST00000560371 ZNF514Q96K75 400 aaPredicted RBP13.35□□□□□ -0.27
TRAF3-208ENST00000560371 TBX18O95935 607 aa13.34□□□□□ -0.27
TRAF3-208ENST00000560371 CD48P09326 243 aa13.34□□□□□ -0.27
TRAF3-208ENST00000560371 GHRHRQ02643 423 aa13.34□□□□□ -0.27
TRAF3-208ENST00000560371 ARSIQ5FYB1 569 aa13.34□□□□□ -0.27
TRAF3-208ENST00000560371 TTC29Q8NA56 475 aaPredicted RBP13.34□□□□□ -0.27
TRAF3-208ENST00000560371 EXOSC8Q96B26 276 aaKnown RBP13.34□□□□□ -0.27
TRAF3-208ENST00000560371 C12orf66Q96MD2 445 aa13.34□□□□□ -0.27
TRAF3-208ENST00000560371 TRPS1Q9UHF7 1281 aa13.34□□□□□ -0.27
TRAF3-208ENST00000560371 OGDHLQ9ULD0 1010 aa13.34□□□□□ -0.27
TRAF3-208ENST00000560371 GOT2P00505 430 aaKnown RBP13.34□□□□□ -0.27
TRAF3-208ENST00000560371 GALNT18Q6P9A2 607 aa13.34□□□□□ -0.27
TRAF3-208ENST00000560371 ZNF730Q6ZMV8 503 aa13.34□□□□□ -0.27
TRAF3-208ENST00000560371 NKD2Q969F2 451 aaPredicted RBP13.34□□□□□ -0.27
TRAF3-208ENST00000560371 RCN3Q96D15 328 aa13.34□□□□□ -0.27
TRAF3-208ENST00000560371 IPPKQ9H8X2 491 aa13.34□□□□□ -0.27
TRAF3-208ENST00000560371 ADGRE2Q9UHX3 823 aa13.34□□□□□ -0.27
TRAF3-208ENST00000560371 FZD10Q9ULW2 581 aa13.34□□□□□ -0.27
TRAF3-208ENST00000560371 XKRYO14609 159 aa13.34□□□□□ -0.27
TRAF3-208ENST00000560371 GNAZP19086 355 aa13.34□□□□□ -0.27
TRAF3-208ENST00000560371 PTGER3P43115 390 aa13.34□□□□□ -0.27
TRAF3-208ENST00000560371 SLC13A2Q13183 592 aa13.34□□□□□ -0.27
TRAF3-208ENST00000560371 PROSER1Q86XN7 944 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms