RNA–Protein interactions for RNA: ENST00000560309.5

ETFA-213, Transcript of electron transfer flavoprotein subunit alpha, humanhuman

TSL 3

Gene ETFA, Length 633 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ETFA-213ENST00000560309 CD68P34810 354 aaPredicted RBP20.34■□□□□ 0.85
ETFA-213ENST00000560309 UGT1A3P35503 534 aa20.34■□□□□ 0.85
ETFA-213ENST00000560309 UBE2IP63279 158 aaKnown RBP20.34■□□□□ 0.85
ETFA-213ENST00000560309 TMEM115Q12893 351 aaPredicted RBP20.34■□□□□ 0.85
ETFA-213ENST00000560309 AGAP9Q5VTM2 703 aa20.34■□□□□ 0.85
ETFA-213ENST00000560309 KDELC1Q6UW63 502 aa20.34■□□□□ 0.85
ETFA-213ENST00000560309 TMEM26Q6ZUK4 368 aa20.34■□□□□ 0.85
ETFA-213ENST00000560309 CCDC50Q8IVM0 306 aa20.34■□□□□ 0.85
ETFA-213ENST00000560309 TRIM48Q8IWZ4 208 aa20.34■□□□□ 0.85
ETFA-213ENST00000560309 BMPERQ8N8U9 685 aa20.34■□□□□ 0.85
ETFA-213ENST00000560309 OSGEPL1Q9H4B0 414 aa20.34■□□□□ 0.85
ETFA-213ENST00000560309 POT1Q9NUX5 634 aa20.34■□□□□ 0.85
ETFA-213ENST00000560309 OCIAD1Q9NX40 245 aa20.34■□□□□ 0.85
ETFA-213ENST00000560309 TMEM9Q9P0T7 183 aa20.34■□□□□ 0.85
ETFA-213ENST00000560309 KALRNO60229 2985 aa20.34■□□□□ 0.85
ETFA-213ENST00000560309 SDK2Q58EX2 2172 aa20.34■□□□□ 0.85
ETFA-213ENST00000560309 IPO7O95373 1038 aaKnown RBP20.33■□□□□ 0.85
ETFA-213ENST00000560309 PECAM1P16284 738 aaPredicted RBP20.33■□□□□ 0.85
ETFA-213ENST00000560309 NFKB1P19838 968 aa20.33■□□□□ 0.85
ETFA-213ENST00000560309 MAP4P27816 1152 aaKnown RBP20.33■□□□□ 0.85
ETFA-213ENST00000560309 ITGA9Q13797 1035 aa20.33■□□□□ 0.85
ETFA-213ENST00000560309 LDLRAP1Q5SW96 308 aa20.33■□□□□ 0.85
ETFA-213ENST00000560309 BBS12Q6ZW61 710 aa20.33■□□□□ 0.85
ETFA-213ENST00000560309 ZC3H18Q86VM9 953 aaKnown RBP20.33■□□□□ 0.85
ETFA-213ENST00000560309 UBP1Q9NZI7 540 aa20.33■□□□□ 0.85
ETFA-213ENST00000560309 PKP3Q9Y446 797 aa20.33■□□□□ 0.85
ETFA-213ENST00000560309 SPO11Q9Y5K1 396 aa20.33■□□□□ 0.85
ETFA-213ENST00000560309 GCN1Q92616 2671 aaKnown RBP20.32■□□□□ 0.84
ETFA-213ENST00000560309 APOC4-APOC2K7ER74 178 aa20.32■□□□□ 0.84
ETFA-213ENST00000560309 ANXA9O76027 345 aa20.32■□□□□ 0.84
ETFA-213ENST00000560309 APOC2P02655 101 aa20.32■□□□□ 0.84
ETFA-213ENST00000560309 SLC4A1P02730 911 aa20.32■□□□□ 0.84
ETFA-213ENST00000560309 C9P02748 559 aa20.32■□□□□ 0.84
ETFA-213ENST00000560309 SPAM1P38567 509 aa20.32■□□□□ 0.84
ETFA-213ENST00000560309 CETN2P41208 172 aa20.32■□□□□ 0.84
ETFA-213ENST00000560309 SLC1A5Q15758 541 aa20.32■□□□□ 0.84
ETFA-213ENST00000560309 LINC00303Q3SY05 128 aa20.32■□□□□ 0.84
ETFA-213ENST00000560309 SIRPB2Q5JXA9 342 aa20.32■□□□□ 0.84
ETFA-213ENST00000560309 SNAP47Q5SQN1 464 aa20.32■□□□□ 0.84
ETFA-213ENST00000560309 ITPRIPL1Q6GPH6 555 aa20.32■□□□□ 0.84
ETFA-213ENST00000560309 CRTC3Q6UUV7 619 aa20.32■□□□□ 0.84
ETFA-213ENST00000560309 DAAM2Q86T65 1068 aa20.32■□□□□ 0.84
ETFA-213ENST00000560309 VASH2Q86V25 355 aa20.32■□□□□ 0.84
ETFA-213ENST00000560309 CACNA2D3Q8IZS8 1091 aa20.32■□□□□ 0.84
ETFA-213ENST00000560309 ZNF567Q8N184 647 aa20.32■□□□□ 0.84
ETFA-213ENST00000560309 GDAP1Q8TB36 358 aa20.32■□□□□ 0.84
ETFA-213ENST00000560309 MRGPRX2Q96LB1 330 aa20.32■□□□□ 0.84
ETFA-213ENST00000560309 PPP1R2P1Q96PQ5 205 aa20.32■□□□□ 0.84
ETFA-213ENST00000560309 QKIQ96PU8 341 aaKnown RBP eCLIP20.32■□□□□ 0.84
ETFA-213ENST00000560309 SEMA4CQ9C0C4 833 aa20.32■□□□□ 0.84
ETFA-213ENST00000560309 ARFGAP3Q9NP61 516 aa20.32■□□□□ 0.84
ETFA-213ENST00000560309 IL17CQ9P0M4 197 aa20.32■□□□□ 0.84
ETFA-213ENST00000560309 ZNF462Q96JM2 2506 aa20.31■□□□□ 0.84
ETFA-213ENST00000560309 MN1Q10571 1320 aaPredicted RBP20.31■□□□□ 0.84
ETFA-213ENST00000560309 KLHL33A6NCF5 533 aa20.31■□□□□ 0.84
ETFA-213ENST00000560309 PRR19A6NJB7 356 aa20.31■□□□□ 0.84
ETFA-213ENST00000560309 A8MU76 341 aa20.31■□□□□ 0.84
ETFA-213ENST00000560309 PDZK1P1A8MUH7 402 aa20.31■□□□□ 0.84
ETFA-213ENST00000560309 J3QKU1 62 aa20.31■□□□□ 0.84
ETFA-213ENST00000560309 AURKAO14965 403 aa20.31■□□□□ 0.84
ETFA-213ENST00000560309 RAD1O60671 282 aa20.31■□□□□ 0.84
ETFA-213ENST00000560309 UBXN7O94888 489 aa20.31■□□□□ 0.84
ETFA-213ENST00000560309 AMD1P17707 334 aa20.31■□□□□ 0.84
ETFA-213ENST00000560309 SLC19A1P41440 591 aa20.31■□□□□ 0.84
ETFA-213ENST00000560309 HALP42357 657 aa20.31■□□□□ 0.84
ETFA-213ENST00000560309 MAPK9P45984 424 aa20.31■□□□□ 0.84
ETFA-213ENST00000560309 ARSDP51689 593 aa20.31■□□□□ 0.84
ETFA-213ENST00000560309 ATP13A5Q4VNC0 1218 aa20.31■□□□□ 0.84
ETFA-213ENST00000560309 ZNF648Q5T619 568 aaPredicted RBP20.31■□□□□ 0.84
ETFA-213ENST00000560309 CCDC181Q5TID7 509 aa20.31■□□□□ 0.84
ETFA-213ENST00000560309 ANKS6Q68DC2 871 aa20.31■□□□□ 0.84
ETFA-213ENST00000560309 CYB5D1Q6P9G0 228 aa20.31■□□□□ 0.84
ETFA-213ENST00000560309 B4GALNT4Q76KP1 1039 aa20.31■□□□□ 0.84
ETFA-213ENST00000560309 GLT6D1Q7Z4J2 308 aa20.31■□□□□ 0.84
ETFA-213ENST00000560309 TMTC1Q8IUR5 882 aa20.31■□□□□ 0.84
ETFA-213ENST00000560309 NLGN4XQ8N0W4 816 aa20.31■□□□□ 0.84
ETFA-213ENST00000560309 TTC30BQ8N4P2 665 aa20.31■□□□□ 0.84
ETFA-213ENST00000560309 NLGN4YQ8NFZ3 816 aaPredicted RBP20.31■□□□□ 0.84
ETFA-213ENST00000560309 KIAA1143Q96AT1 154 aaPredicted RBP20.31■□□□□ 0.84
ETFA-213ENST00000560309 RTP4Q96DX8 246 aa20.31■□□□□ 0.84
ETFA-213ENST00000560309 ZNF514Q96K75 400 aaPredicted RBP20.31■□□□□ 0.84
ETFA-213ENST00000560309 CATSPER2Q96P56 530 aa20.31■□□□□ 0.84
ETFA-213ENST00000560309 PANX2Q96RD6 677 aa20.31■□□□□ 0.84
ETFA-213ENST00000560309 FSD1LQ9BXM9 530 aa20.31■□□□□ 0.84
ETFA-213ENST00000560309 SPRY4Q9C004 299 aa20.31■□□□□ 0.84
ETFA-213ENST00000560309 BPIFA1Q9NP55 256 aa20.31■□□□□ 0.84
ETFA-213ENST00000560309 IL26Q9NPH9 171 aa20.31■□□□□ 0.84
ETFA-213ENST00000560309 ZNF624Q9P2J8 865 aaPredicted RBP20.31■□□□□ 0.84
ETFA-213ENST00000560309 SLC23A2Q9UGH3 650 aa20.31■□□□□ 0.84
ETFA-213ENST00000560309 PILRAQ9UKJ1 303 aa20.31■□□□□ 0.84
ETFA-213ENST00000560309 AAR2Q9Y312 384 aaKnown RBP20.31■□□□□ 0.84
ETFA-213ENST00000560309 POLR1CO15160 346 aaPredicted RBP20.3■□□□□ 0.84
ETFA-213ENST00000560309 GEMP55040 296 aa20.3■□□□□ 0.84
ETFA-213ENST00000560309 ADCY2Q08462 1091 aa20.3■□□□□ 0.84
ETFA-213ENST00000560309 DMPKQ09013 629 aa20.3■□□□□ 0.84
ETFA-213ENST00000560309 SRSF6Q13247 344 aaKnown RBP20.3■□□□□ 0.84
ETFA-213ENST00000560309 AMZ2Q86W34 360 aa20.3■□□□□ 0.84
ETFA-213ENST00000560309 TRAPPC5Q8IUR0 188 aa20.3■□□□□ 0.84
ETFA-213ENST00000560309 ZNF547Q8IVP9 402 aa20.3■□□□□ 0.84
ETFA-213ENST00000560309 EXTL1Q92935 676 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms