RNA–Protein interactions for RNA: ENST00000559494.1

TSPAN3-207, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-207ENST00000559494 TTC25Q96NG3 672 aa20.02■□□□□ 0.8
TSPAN3-207ENST00000559494 ERP44Q9BS26 406 aa20.02■□□□□ 0.8
TSPAN3-207ENST00000559494 TOR4AQ9NXH8 423 aa20.02■□□□□ 0.8
TSPAN3-207ENST00000559494 TAAR2Q9P1P5 351 aa20.02■□□□□ 0.8
TSPAN3-207ENST00000559494 SLC23A2Q9UGH3 650 aa20.02■□□□□ 0.8
TSPAN3-207ENST00000559494 GPR34Q9UPC5 381 aa20.02■□□□□ 0.8
TSPAN3-207ENST00000559494 U3KQA8 63 aa20.02■□□□□ 0.8
TSPAN3-207ENST00000559494 RP1P56715 2156 aa20.02■□□□□ 0.8
TSPAN3-207ENST00000559494 KNTC1P50748 2209 aa20.02■□□□□ 0.79
TSPAN3-207ENST00000559494 SEC31AO94979 1220 aaKnown RBP20.02■□□□□ 0.79
TSPAN3-207ENST00000559494 ACP5P13686 325 aa20.02■□□□□ 0.79
TSPAN3-207ENST00000559494 CKMT2P17540 419 aa20.02■□□□□ 0.79
TSPAN3-207ENST00000559494 MSH3P20585 1137 aa20.02■□□□□ 0.79
TSPAN3-207ENST00000559494 KCNA4P22459 653 aa20.02■□□□□ 0.79
TSPAN3-207ENST00000559494 FNBP1LQ5T0N5 605 aa20.02■□□□□ 0.79
TSPAN3-207ENST00000559494 ARMC3Q5W041 872 aa20.02■□□□□ 0.79
TSPAN3-207ENST00000559494 OGFOD3Q6PK18 319 aa20.02■□□□□ 0.79
TSPAN3-207ENST00000559494 SLC30A9Q6PML9 568 aa20.02■□□□□ 0.79
TSPAN3-207ENST00000559494 TMEM220Q6QAJ8 160 aa20.02■□□□□ 0.79
TSPAN3-207ENST00000559494 LRRTM4Q86VH4 590 aa20.02■□□□□ 0.79
TSPAN3-207ENST00000559494 SLC35F3Q8IY50 421 aa20.02■□□□□ 0.79
TSPAN3-207ENST00000559494 OR4L1Q8NH43 312 aa20.02■□□□□ 0.79
TSPAN3-207ENST00000559494 NAT14Q8WUY8 206 aa20.02■□□□□ 0.79
TSPAN3-207ENST00000559494 SGSM3Q96HU1 749 aa20.02■□□□□ 0.79
TSPAN3-207ENST00000559494 PWWP2AQ96N64 755 aa20.02■□□□□ 0.79
TSPAN3-207ENST00000559494 TRIM56Q9BRZ2 755 aaKnown RBP20.02■□□□□ 0.79
TSPAN3-207ENST00000559494 ZDHHC3Q9NYG2 299 aa20.02■□□□□ 0.79
TSPAN3-207ENST00000559494 IGLV3-16A0A075B6K0 115 aa20.01■□□□□ 0.79
TSPAN3-207ENST00000559494 MAGEB16A2A368 324 aa20.01■□□□□ 0.79
TSPAN3-207ENST00000559494 KMOO15229 486 aa20.01■□□□□ 0.79
TSPAN3-207ENST00000559494 SGTAO43765 313 aa20.01■□□□□ 0.79
TSPAN3-207ENST00000559494 ACRV1P26436 265 aa20.01■□□□□ 0.79
TSPAN3-207ENST00000559494 AKT1P31749 480 aa20.01■□□□□ 0.79
TSPAN3-207ENST00000559494 ACTR1BP42025 376 aa20.01■□□□□ 0.79
TSPAN3-207ENST00000559494 ACTR1AP61163 376 aa20.01■□□□□ 0.79
TSPAN3-207ENST00000559494 PRAMEP78395 509 aa20.01■□□□□ 0.79
TSPAN3-207ENST00000559494 GTF2H3Q13889 308 aa20.01■□□□□ 0.79
TSPAN3-207ENST00000559494 LRP8Q14114 963 aa20.01■□□□□ 0.79
TSPAN3-207ENST00000559494 DBN1Q16643 649 aa20.01■□□□□ 0.79
TSPAN3-207ENST00000559494 MSS51Q4VC12 460 aa20.01■□□□□ 0.79
TSPAN3-207ENST00000559494 DUPD1Q68J44 220 aa20.01■□□□□ 0.79
TSPAN3-207ENST00000559494 CASC4Q6P4E1 433 aa20.01■□□□□ 0.79
TSPAN3-207ENST00000559494 AFTPHQ6ULP2 937 aa20.01■□□□□ 0.79
TSPAN3-207ENST00000559494 C11orf96Q7Z7L8 435 aa20.01■□□□□ 0.79
TSPAN3-207ENST00000559494 SGF29Q96ES7 293 aa20.01■□□□□ 0.79
TSPAN3-207ENST00000559494 FCRL3Q96P31 734 aaPredicted RBP20.01■□□□□ 0.79
TSPAN3-207ENST00000559494 COPS8Q99627 209 aa20.01■□□□□ 0.79
TSPAN3-207ENST00000559494 ZCCHC2Q9C0B9 1178 aaKnown RBP20.01■□□□□ 0.79
TSPAN3-207ENST00000559494 DPEP2Q9H4A9 486 aa20.01■□□□□ 0.79
TSPAN3-207ENST00000559494 SIRPGQ9P1W8 387 aa20.01■□□□□ 0.79
TSPAN3-207ENST00000559494 GULP1Q9UBP9 304 aa20.01■□□□□ 0.79
TSPAN3-207ENST00000559494 ANAPC5Q9UJX4 755 aa20.01■□□□□ 0.79
TSPAN3-207ENST00000559494 KCNK6Q9Y257 313 aa20.01■□□□□ 0.79
TSPAN3-207ENST00000559494 PIKFYVEQ9Y2I7 2098 aa20■□□□□ 0.79
TSPAN3-207ENST00000559494 CACNA1AO00555 2505 aa20■□□□□ 0.79
TSPAN3-207ENST00000559494 SPEGQ15772 3267 aa20■□□□□ 0.79
TSPAN3-207ENST00000559494 FAM237BA0A1B0GVD1 139 aa20■□□□□ 0.79
TSPAN3-207ENST00000559494 OR2AG2A6NM03 316 aa20■□□□□ 0.79
TSPAN3-207ENST00000559494 BANF1O75531 89 aa20■□□□□ 0.79
TSPAN3-207ENST00000559494 CKMT1AP12532 417 aa20■□□□□ 0.79
TSPAN3-207ENST00000559494 ZNF7P17097 686 aaPredicted RBP20■□□□□ 0.79
TSPAN3-207ENST00000559494 ARNTP27540 789 aa20■□□□□ 0.79
TSPAN3-207ENST00000559494 ANKRD20A4Q4UJ75 823 aa20■□□□□ 0.79
TSPAN3-207ENST00000559494 N4BP2L1Q5TBK1 243 aaPredicted RBP20■□□□□ 0.79
TSPAN3-207ENST00000559494 DET1Q7L5Y6 550 aa20■□□□□ 0.79
TSPAN3-207ENST00000559494 TRAPPC5Q8IUR0 188 aa20■□□□□ 0.79
TSPAN3-207ENST00000559494 GPR156Q8NFN8 814 aa20■□□□□ 0.79
TSPAN3-207ENST00000559494 DPH5Q9H2P9 285 aa20■□□□□ 0.79
TSPAN3-207ENST00000559494 SMAPO00193 183 aa19.99■□□□□ 0.79
TSPAN3-207ENST00000559494 NOBOXO60393 691 aa19.99■□□□□ 0.79
TSPAN3-207ENST00000559494 POP7O75817 140 aaKnown RBP19.99■□□□□ 0.79
TSPAN3-207ENST00000559494 FTH1P19P0C7X4 201 aa19.99■□□□□ 0.79
TSPAN3-207ENST00000559494 ATP1B2P14415 290 aaPredicted RBP19.99■□□□□ 0.79
TSPAN3-207ENST00000559494 ACP1P24666 158 aa19.99■□□□□ 0.79
TSPAN3-207ENST00000559494 ARCN1P48444 511 aaKnown RBP19.99■□□□□ 0.79
TSPAN3-207ENST00000559494 ACADVLP49748 655 aa19.99■□□□□ 0.79
TSPAN3-207ENST00000559494 CLCNKAP51800 687 aa19.99■□□□□ 0.79
TSPAN3-207ENST00000559494 DAB2P98082 770 aa19.99■□□□□ 0.79
TSPAN3-207ENST00000559494 DHX9Q08211 1270 aaKnown RBP19.99■□□□□ 0.79
TSPAN3-207ENST00000559494 SEMA3AQ14563 771 aa19.99■□□□□ 0.79
TSPAN3-207ENST00000559494 PLA2G4EQ3MJ16 856 aa19.99■□□□□ 0.79
TSPAN3-207ENST00000559494 TMEM135Q86UB9 458 aa19.99■□□□□ 0.79
TSPAN3-207ENST00000559494 KYQ8NBH2 561 aa19.99■□□□□ 0.79
TSPAN3-207ENST00000559494 ZDHHC1Q8WTX9 485 aa19.99■□□□□ 0.79
TSPAN3-207ENST00000559494 HEXDCQ8WVB3 486 aa19.99■□□□□ 0.79
TSPAN3-207ENST00000559494 GLMNQ92990 594 aa19.99■□□□□ 0.79
TSPAN3-207ENST00000559494 DCUN1D1Q96GG9 259 aa19.99■□□□□ 0.79
TSPAN3-207ENST00000559494 TIMM29Q9BSF4 260 aa19.99■□□□□ 0.79
TSPAN3-207ENST00000559494 LRRC1Q9BTT6 524 aa19.99■□□□□ 0.79
TSPAN3-207ENST00000559494 KLC4Q9NSK0 619 aa19.99■□□□□ 0.79
TSPAN3-207ENST00000559494 SAMD15Q9P1V8 674 aa19.99■□□□□ 0.79
TSPAN3-207ENST00000559494 MARCH4Q9P2E8 410 aaPredicted RBP19.99■□□□□ 0.79
TSPAN3-207ENST00000559494 MAD1L1Q9Y6D9 718 aa19.99■□□□□ 0.79
TSPAN3-207ENST00000559494 PRR19A6NJB7 356 aa19.98■□□□□ 0.79
TSPAN3-207ENST00000559494 B4DGG1 531 aa19.98■□□□□ 0.79
TSPAN3-207ENST00000559494 DKK1O94907 266 aa19.98■□□□□ 0.79
TSPAN3-207ENST00000559494 VAPBO95292 243 aa19.98■□□□□ 0.79
TSPAN3-207ENST00000559494 EML2O95834 649 aa19.98■□□□□ 0.79
TSPAN3-207ENST00000559494 NR0B2Q15466 257 aa19.98■□□□□ 0.79
TSPAN3-207ENST00000559494 BBS9Q3SYG4 887 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms