RNA–Protein interactions for RNA: ENST00000559309.5

SNRPA1-207, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-207ENST00000559309 NSG1P42857 185 aa14.63□□□□□ -0.07
SNRPA1-207ENST00000559309 RXRGP48443 463 aa14.63□□□□□ -0.07
SNRPA1-207ENST00000559309 NAB1Q13506 487 aa14.63□□□□□ -0.07
SNRPA1-207ENST00000559309 PTK2BQ14289 1009 aa14.63□□□□□ -0.07
SNRPA1-207ENST00000559309 BRD3Q15059 726 aa14.63□□□□□ -0.07
SNRPA1-207ENST00000559309 BCL7AQ4VC05 210 aa14.63□□□□□ -0.07
SNRPA1-207ENST00000559309 ZNF470Q6ECI4 717 aa14.63□□□□□ -0.07
SNRPA1-207ENST00000559309 LAYNQ6UX15 382 aa14.63□□□□□ -0.07
SNRPA1-207ENST00000559309 LDB1Q86U70 411 aaPredicted RBP14.63□□□□□ -0.07
SNRPA1-207ENST00000559309 TRIM74Q86UV6 250 aa14.63□□□□□ -0.07
SNRPA1-207ENST00000559309 OXR1Q8N573 874 aa14.63□□□□□ -0.07
SNRPA1-207ENST00000559309 RASGEF1AQ8N9B8 481 aa14.63□□□□□ -0.07
SNRPA1-207ENST00000559309 OR56A4Q8NGH8 313 aa14.63□□□□□ -0.07
SNRPA1-207ENST00000559309 FBF1Q8TES7 1133 aa14.63□□□□□ -0.07
SNRPA1-207ENST00000559309 OR1E3Q8WZA6 343 aa14.63□□□□□ -0.07
SNRPA1-207ENST00000559309 PIGKQ92643 395 aa14.63□□□□□ -0.07
SNRPA1-207ENST00000559309 COPS8Q99627 209 aa14.63□□□□□ -0.07
SNRPA1-207ENST00000559309 DHRS4Q9BTZ2 278 aa14.63□□□□□ -0.07
SNRPA1-207ENST00000559309 BOCQ9BWV1 1114 aa14.63□□□□□ -0.07
SNRPA1-207ENST00000559309 MIR1-1HGQ9H1L0 117 aa14.63□□□□□ -0.07
SNRPA1-207ENST00000559309 FETUBQ9UGM5 382 aa14.63□□□□□ -0.07
SNRPA1-207ENST00000559309 CRLS1Q9UJA2 301 aa14.63□□□□□ -0.07
SNRPA1-207ENST00000559309 SLC6A14Q9UN76 642 aa14.63□□□□□ -0.07
SNRPA1-207ENST00000559309 ANKRD6Q9Y2G4 727 aa14.63□□□□□ -0.07
SNRPA1-207ENST00000559309 ST14Q9Y5Y6 855 aa14.63□□□□□ -0.07
SNRPA1-207ENST00000559309 PSAT1Q9Y617 370 aa14.63□□□□□ -0.07
SNRPA1-207ENST00000559309 SDK1Q7Z5N4 2213 aa14.63□□□□□ -0.07
SNRPA1-207ENST00000559309 A0A1B0GVT2 93 aa14.62□□□□□ -0.07
SNRPA1-207ENST00000559309 PATE3B3GLJ2 98 aa14.62□□□□□ -0.07
SNRPA1-207ENST00000559309 OR1I1O60431 355 aa14.62□□□□□ -0.07
SNRPA1-207ENST00000559309 AP2A2O94973 939 aa14.62□□□□□ -0.07
SNRPA1-207ENST00000559309 CSF2P04141 144 aa14.62□□□□□ -0.07
SNRPA1-207ENST00000559309 ZNF806P0C7X5 589 aa14.62□□□□□ -0.07
SNRPA1-207ENST00000559309 NME1P15531 152 aaKnown RBP14.62□□□□□ -0.07
SNRPA1-207ENST00000559309 ZNF8P17098 575 aaPredicted RBP14.62□□□□□ -0.07
SNRPA1-207ENST00000559309 GCAP28676 217 aa14.62□□□□□ -0.07
SNRPA1-207ENST00000559309 STX2P32856 288 aa14.62□□□□□ -0.07
SNRPA1-207ENST00000559309 POLD2P49005 469 aa14.62□□□□□ -0.07
SNRPA1-207ENST00000559309 PRLHRP49683 370 aa14.62□□□□□ -0.07
SNRPA1-207ENST00000559309 CSRP3P50461 194 aa14.62□□□□□ -0.07
SNRPA1-207ENST00000559309 CTSCP53634 463 aa14.62□□□□□ -0.07
SNRPA1-207ENST00000559309 TIAL1Q01085 375 aaKnown RBP eCLIP14.62□□□□□ -0.07
SNRPA1-207ENST00000559309 CTBP1Q13363 440 aa14.62□□□□□ -0.07
SNRPA1-207ENST00000559309 SHBQ15464 509 aa14.62□□□□□ -0.07
SNRPA1-207ENST00000559309 LPAL2Q16609 132 aa14.62□□□□□ -0.07
SNRPA1-207ENST00000559309 ALG11Q2TAA5 492 aa14.62□□□□□ -0.07
SNRPA1-207ENST00000559309 KIF19Q2TAC6 998 aa14.62□□□□□ -0.07
SNRPA1-207ENST00000559309 KBTBD12Q3ZCT8 623 aa14.62□□□□□ -0.07
SNRPA1-207ENST00000559309 PYCR3Q53H96 274 aa14.62□□□□□ -0.07
SNRPA1-207ENST00000559309 CTSL3PQ5NE16 218 aa14.62□□□□□ -0.07
SNRPA1-207ENST00000559309 ZNF648Q5T619 568 aaPredicted RBP14.62□□□□□ -0.07
SNRPA1-207ENST00000559309 RNF187Q5TA31 235 aaPredicted RBP14.62□□□□□ -0.07
SNRPA1-207ENST00000559309 ZNF549Q6P9A3 640 aa14.62□□□□□ -0.07
SNRPA1-207ENST00000559309 KANSL1Q7Z3B3 1105 aa14.62□□□□□ -0.07
SNRPA1-207ENST00000559309 PARGQ86W56 976 aa14.62□□□□□ -0.07
SNRPA1-207ENST00000559309 RBFAQ8N0V3 343 aa14.62□□□□□ -0.07
SNRPA1-207ENST00000559309 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.62□□□□□ -0.07
SNRPA1-207ENST00000559309 PDXPQ96GD0 296 aa14.62□□□□□ -0.07
SNRPA1-207ENST00000559309 ZNF514Q96K75 400 aaPredicted RBP14.62□□□□□ -0.07
SNRPA1-207ENST00000559309 ARRDC1-AS1Q9H2J1 176 aa14.62□□□□□ -0.07
SNRPA1-207ENST00000559309 LATS2Q9NRM7 1088 aa14.62□□□□□ -0.07
SNRPA1-207ENST00000559309 IARS2Q9NSE4 1012 aaKnown RBP14.62□□□□□ -0.07
SNRPA1-207ENST00000559309 SLC17A6Q9P2U8 582 aa14.62□□□□□ -0.07
SNRPA1-207ENST00000559309 DNMT3AQ9Y6K1 912 aaPredicted RBP14.62□□□□□ -0.07
SNRPA1-207ENST00000559309 PRSS21Q9Y6M0 314 aa14.62□□□□□ -0.07
SNRPA1-207ENST00000559309 ADAMTS9Q9P2N4 1935 aa14.61□□□□□ -0.07
SNRPA1-207ENST00000559309 PRSS38A1L453 326 aa14.61□□□□□ -0.07
SNRPA1-207ENST00000559309 PRMT5O14744 637 aaPredicted RBP14.61□□□□□ -0.07
SNRPA1-207ENST00000559309 MTX2O75431 263 aa14.61□□□□□ -0.07
SNRPA1-207ENST00000559309 TCEA3O75764 348 aa14.61□□□□□ -0.07
SNRPA1-207ENST00000559309 HAUS5O94927 633 aa14.61□□□□□ -0.07
SNRPA1-207ENST00000559309 NUDT17P0C025 328 aa14.61□□□□□ -0.07
SNRPA1-207ENST00000559309 ATP1B2P14415 290 aaPredicted RBP14.61□□□□□ -0.07
SNRPA1-207ENST00000559309 H2AFXP16104 143 aaPredicted RBP14.61□□□□□ -0.07
SNRPA1-207ENST00000559309 HTR1BP28222 390 aa14.61□□□□□ -0.07
SNRPA1-207ENST00000559309 PHBP35232 272 aa14.61□□□□□ -0.07
SNRPA1-207ENST00000559309 PPARGP37231 505 aaPredicted RBP14.61□□□□□ -0.07
SNRPA1-207ENST00000559309 CLCNKAP51800 687 aa14.61□□□□□ -0.07
SNRPA1-207ENST00000559309 HK3P52790 923 aa14.61□□□□□ -0.07
SNRPA1-207ENST00000559309 DMPKQ09013 629 aa14.61□□□□□ -0.07
SNRPA1-207ENST00000559309 THOC5Q13769 683 aaKnown RBP14.61□□□□□ -0.07
SNRPA1-207ENST00000559309 SLC29A2Q14542 456 aa14.61□□□□□ -0.07
SNRPA1-207ENST00000559309 TEAD4Q15561 434 aa14.61□□□□□ -0.07
SNRPA1-207ENST00000559309 BEND6Q5SZJ8 279 aaPredicted RBP14.61□□□□□ -0.07
SNRPA1-207ENST00000559309 SDCCAG8Q86SQ7 713 aaPredicted RBP14.61□□□□□ -0.07
SNRPA1-207ENST00000559309 LRRC6Q86X45 466 aa14.61□□□□□ -0.07
SNRPA1-207ENST00000559309 CYTH2Q99418 400 aa14.61□□□□□ -0.07
SNRPA1-207ENST00000559309 ZDHHC5Q9C0B5 715 aa14.61□□□□□ -0.07
SNRPA1-207ENST00000559309 ZCCHC2Q9C0B9 1178 aaKnown RBP14.61□□□□□ -0.07
SNRPA1-207ENST00000559309 OR2AG1Q9H205 316 aa14.61□□□□□ -0.07
SNRPA1-207ENST00000559309 ARFGAP3Q9NP61 516 aa14.61□□□□□ -0.07
SNRPA1-207ENST00000559309 TRNAU1APQ9NX07 287 aaKnown RBP14.61□□□□□ -0.07
SNRPA1-207ENST00000559309 NSMCE4AQ9NXX6 385 aa14.61□□□□□ -0.07
SNRPA1-207ENST00000559309 EURLQ9NYK6 297 aa14.61□□□□□ -0.07
SNRPA1-207ENST00000559309 RAB23Q9ULC3 237 aa14.61□□□□□ -0.07
SNRPA1-207ENST00000559309 CORO1CQ9ULV4 474 aaPredicted RBP14.61□□□□□ -0.07
SNRPA1-207ENST00000559309 VPS9D1Q9Y2B5 631 aa14.61□□□□□ -0.07
SNRPA1-207ENST00000559309 TMEM98Q9Y2Y6 226 aa14.61□□□□□ -0.07
SNRPA1-207ENST00000559309 SNX11Q9Y5W9 270 aa14.61□□□□□ -0.07
SNRPA1-207ENST00000559309 ZFC3H1O60293 1989 aaKnown RBP14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms