RNA–Protein interactions for RNA: ENST00000559222.5

CASC4-209, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-209ENST00000559222 OPA1O60313 960 aa18.44■□□□□ 0.54
CASC4-209ENST00000559222 SNX2O60749 519 aa18.44■□□□□ 0.54
CASC4-209ENST00000559222 ZNF7P17097 686 aaPredicted RBP18.44■□□□□ 0.54
CASC4-209ENST00000559222 ITGALP20701 1170 aa18.44■□□□□ 0.54
CASC4-209ENST00000559222 ADRA1DP25100 572 aa18.44■□□□□ 0.54
CASC4-209ENST00000559222 NMBRP28336 390 aa18.44■□□□□ 0.54
CASC4-209ENST00000559222 PBLDP30039 288 aaPredicted RBP18.44■□□□□ 0.54
CASC4-209ENST00000559222 AKT1P31749 480 aa18.44■□□□□ 0.54
CASC4-209ENST00000559222 FOXN2P32314 431 aa18.44■□□□□ 0.54
CASC4-209ENST00000559222 HADHAP40939 763 aa18.44■□□□□ 0.54
CASC4-209ENST00000559222 PTK6Q13882 451 aa18.44■□□□□ 0.54
CASC4-209ENST00000559222 SEMA3AQ14563 771 aa18.44■□□□□ 0.54
CASC4-209ENST00000559222 C14orf28Q4W4Y0 310 aa18.44■□□□□ 0.54
CASC4-209ENST00000559222 LDLRAP1Q5SW96 308 aa18.44■□□□□ 0.54
CASC4-209ENST00000559222 LRRC8BQ6P9F7 803 aa18.44■□□□□ 0.54
CASC4-209ENST00000559222 FAM83HQ6ZRV2 1179 aaPredicted RBP18.44■□□□□ 0.54
CASC4-209ENST00000559222 SNX20Q7Z614 316 aa18.44■□□□□ 0.54
CASC4-209ENST00000559222 C17orf82Q86X59 251 aaPredicted RBP18.44■□□□□ 0.54
CASC4-209ENST00000559222 TRAPPC5Q8IUR0 188 aa18.44■□□□□ 0.54
CASC4-209ENST00000559222 GRK7Q8WTQ7 553 aa18.44■□□□□ 0.54
CASC4-209ENST00000559222 HDAC10Q969S8 669 aa18.44■□□□□ 0.54
CASC4-209ENST00000559222 CCDC3Q9BQI4 270 aa18.44■□□□□ 0.54
CASC4-209ENST00000559222 PRDM8Q9NQV8 689 aa18.44■□□□□ 0.54
CASC4-209ENST00000559222 SCHIP1Q9P0W5 487 aaPredicted RBP18.44■□□□□ 0.54
CASC4-209ENST00000559222 PCYOX1Q9UHG3 505 aa18.44■□□□□ 0.54
CASC4-209ENST00000559222 TRIM16O95361 564 aa18.43■□□□□ 0.54
CASC4-209ENST00000559222 GAS8O95995 478 aa18.43■□□□□ 0.54
CASC4-209ENST00000559222 GOT2P00505 430 aaKnown RBP18.43■□□□□ 0.54
CASC4-209ENST00000559222 DUSP3P51452 185 aaPredicted RBP18.43■□□□□ 0.54
CASC4-209ENST00000559222 SHC2P98077 582 aa18.43■□□□□ 0.54
CASC4-209ENST00000559222 ACVR1Q04771 509 aa18.43■□□□□ 0.54
CASC4-209ENST00000559222 LRP8Q14114 963 aa18.43■□□□□ 0.54
CASC4-209ENST00000559222 PPP1R7Q15435 360 aa18.43■□□□□ 0.54
CASC4-209ENST00000559222 DBN1Q16643 649 aa18.43■□□□□ 0.54
CASC4-209ENST00000559222 INSCQ1MX18 579 aa18.43■□□□□ 0.54
CASC4-209ENST00000559222 RNASEH2BQ5TBB1 312 aaKnown RBP18.43■□□□□ 0.54
CASC4-209ENST00000559222 TMEM220Q6QAJ8 160 aa18.43■□□□□ 0.54
CASC4-209ENST00000559222 TMPRSS7Q7RTY8 843 aa18.43■□□□□ 0.54
CASC4-209ENST00000559222 SERPINA9Q86WD7 417 aa18.43■□□□□ 0.54
CASC4-209ENST00000559222 ARL14Q8N4G2 192 aa18.43■□□□□ 0.54
CASC4-209ENST00000559222 NAT8LQ8N9F0 302 aa18.43■□□□□ 0.54
CASC4-209ENST00000559222 PPHLN1Q8NEY8 458 aaKnown RBP18.43■□□□□ 0.54
CASC4-209ENST00000559222 SLCO2A1Q92959 643 aa18.43■□□□□ 0.54
CASC4-209ENST00000559222 GLMNQ92990 594 aa18.43■□□□□ 0.54
CASC4-209ENST00000559222 SGF29Q96ES7 293 aa18.43■□□□□ 0.54
CASC4-209ENST00000559222 C19orf43Q9BQ61 176 aa18.43■□□□□ 0.54
CASC4-209ENST00000559222 OSGEPL1Q9H4B0 414 aa18.43■□□□□ 0.54
CASC4-209ENST00000559222 ANGPTL2Q9UKU9 493 aa18.43■□□□□ 0.54
CASC4-209ENST00000559222 SLC30A1Q9Y6M5 507 aa18.43■□□□□ 0.54
CASC4-209ENST00000559222 PIKFYVEQ9Y2I7 2098 aa18.43■□□□□ 0.54
CASC4-209ENST00000559222 KMT2BQ9UMN6 2715 aaPredicted RBP18.43■□□□□ 0.54
CASC4-209ENST00000559222 KMOO15229 486 aa18.42■□□□□ 0.54
CASC4-209ENST00000559222 TTI1O43156 1089 aa18.42■□□□□ 0.54
CASC4-209ENST00000559222 MSH3P20585 1137 aa18.42■□□□□ 0.54
CASC4-209ENST00000559222 ACRV1P26436 265 aa18.42■□□□□ 0.54
CASC4-209ENST00000559222 IVDP26440 423 aa18.42■□□□□ 0.54
CASC4-209ENST00000559222 RPIAP49247 311 aa18.42■□□□□ 0.54
CASC4-209ENST00000559222 C2orf54Q08AI8 447 aa18.42■□□□□ 0.54
CASC4-209ENST00000559222 ILKQ13418 452 aa18.42■□□□□ 0.54
CASC4-209ENST00000559222 GTF2H3Q13889 308 aa18.42■□□□□ 0.54
CASC4-209ENST00000559222 SEPT7Q16181 437 aaKnown RBP18.42■□□□□ 0.54
CASC4-209ENST00000559222 PCID2Q5JVF3 399 aa18.42■□□□□ 0.54
CASC4-209ENST00000559222 FNBP1LQ5T0N5 605 aa18.42■□□□□ 0.54
CASC4-209ENST00000559222 TAS2R42Q7RTR8 314 aa18.42■□□□□ 0.54
CASC4-209ENST00000559222 ZNF761Q86XN6 746 aaPredicted RBP18.42■□□□□ 0.54
CASC4-209ENST00000559222 JAMLQ86YT9 394 aa18.42■□□□□ 0.54
CASC4-209ENST00000559222 Q8N9G6 341 aaPredicted RBP18.42■□□□□ 0.54
CASC4-209ENST00000559222 MAPK15Q8TD08 544 aa18.42■□□□□ 0.54
CASC4-209ENST00000559222 SLC37A2Q8TED4 501 aa18.42■□□□□ 0.54
CASC4-209ENST00000559222 SERPINB12Q96P63 405 aa18.42■□□□□ 0.54
CASC4-209ENST00000559222 TREX1Q9NSU2 369 aa18.42■□□□□ 0.54
CASC4-209ENST00000559222 MARCH4Q9P2E8 410 aaPredicted RBP18.42■□□□□ 0.54
CASC4-209ENST00000559222 ASIC3Q9UHC3 531 aa18.42■□□□□ 0.54
CASC4-209ENST00000559222 PRSS21Q9Y6M0 314 aa18.42■□□□□ 0.54
CASC4-209ENST00000559222 IGLV3-16A0A075B6K0 115 aa18.41■□□□□ 0.54
CASC4-209ENST00000559222 PRAMEF33A0A0G2JMD5 474 aa18.41■□□□□ 0.54
CASC4-209ENST00000559222 A0A1W2PQM1 296 aa18.41■□□□□ 0.54
CASC4-209ENST00000559222 GPR89AB7ZAQ6 455 aa18.41■□□□□ 0.54
CASC4-209ENST00000559222 PPM1DO15297 605 aa18.41■□□□□ 0.54
CASC4-209ENST00000559222 BANF1O75531 89 aa18.41■□□□□ 0.54
CASC4-209ENST00000559222 POP7O75817 140 aaKnown RBP18.41■□□□□ 0.54
CASC4-209ENST00000559222 GP1BAP07359 652 aa18.41■□□□□ 0.54
CASC4-209ENST00000559222 GPR89BP0CG08 455 aa18.41■□□□□ 0.54
CASC4-209ENST00000559222 ARNTP27540 789 aa18.41■□□□□ 0.54
CASC4-209ENST00000559222 CCL7P80098 99 aa18.41■□□□□ 0.54
CASC4-209ENST00000559222 CDK16Q00536 496 aa18.41■□□□□ 0.54
CASC4-209ENST00000559222 CACNG1Q06432 222 aa18.41■□□□□ 0.54
CASC4-209ENST00000559222 NFE2L1Q14494 772 aa18.41■□□□□ 0.54
CASC4-209ENST00000559222 SKIDA1Q1XH10 827 aa18.41■□□□□ 0.54
CASC4-209ENST00000559222 CDCP2Q5VXM1 449 aa18.41■□□□□ 0.54
CASC4-209ENST00000559222 LDB1Q86U70 411 aaPredicted RBP18.41■□□□□ 0.54
CASC4-209ENST00000559222 LILRA3Q8N6C8 439 aaPredicted RBP18.41■□□□□ 0.54
CASC4-209ENST00000559222 ULK4Q96C45 1275 aa18.41■□□□□ 0.54
CASC4-209ENST00000559222 MFSD3Q96ES6 412 aa18.41■□□□□ 0.54
CASC4-209ENST00000559222 TTC25Q96NG3 672 aa18.41■□□□□ 0.54
CASC4-209ENST00000559222 KRT12Q99456 494 aa18.41■□□□□ 0.54
CASC4-209ENST00000559222 TIMM29Q9BSF4 260 aa18.41■□□□□ 0.54
CASC4-209ENST00000559222 TMEM121BQ9BXQ6 578 aaPredicted RBP18.41■□□□□ 0.54
CASC4-209ENST00000559222 SYNDIG1Q9H7V2 258 aa18.41■□□□□ 0.54
CASC4-209ENST00000559222 ZDHHC3Q9NYG2 299 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms