RNA–Protein interactions for RNA: ENST00000558827.1

SMAD3-208, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-208ENST00000558827 CCDC78A2IDD5 438 aa12.34□□□□□ -0.43
SMAD3-208ENST00000558827 KMOO15229 486 aa12.34□□□□□ -0.43
SMAD3-208ENST00000558827 ANXA9O76027 345 aa12.34□□□□□ -0.43
SMAD3-208ENST00000558827 STK10O94804 968 aaKnown RBP12.34□□□□□ -0.43
SMAD3-208ENST00000558827 EPOP01588 193 aa12.34□□□□□ -0.43
SMAD3-208ENST00000558827 ITGA2BP08514 1039 aa12.34□□□□□ -0.43
SMAD3-208ENST00000558827 HLA-DPA1P20036 260 aa12.34□□□□□ -0.43
SMAD3-208ENST00000558827 HMGCLP35914 325 aa12.34□□□□□ -0.43
SMAD3-208ENST00000558827 SPAM1P38567 509 aa12.34□□□□□ -0.43
SMAD3-208ENST00000558827 CTSCP53634 463 aa12.34□□□□□ -0.43
SMAD3-208ENST00000558827 TMEM115Q12893 351 aaPredicted RBP12.34□□□□□ -0.43
SMAD3-208ENST00000558827 CLN3Q13286 438 aa12.34□□□□□ -0.43
SMAD3-208ENST00000558827 PRPSAP1Q14558 356 aa12.34□□□□□ -0.43
SMAD3-208ENST00000558827 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.34□□□□□ -0.43
SMAD3-208ENST00000558827 BROXQ5VW32 411 aa12.34□□□□□ -0.43
SMAD3-208ENST00000558827 TMEM220Q6QAJ8 160 aa12.34□□□□□ -0.43
SMAD3-208ENST00000558827 GPR155Q7Z3F1 870 aa12.34□□□□□ -0.43
SMAD3-208ENST00000558827 PRUNE1Q86TP1 453 aa12.34□□□□□ -0.43
SMAD3-208ENST00000558827 VASH2Q86V25 355 aa12.34□□□□□ -0.43
SMAD3-208ENST00000558827 LRRTM4Q86VH4 590 aa12.34□□□□□ -0.43
SMAD3-208ENST00000558827 ZNF547Q8IVP9 402 aa12.34□□□□□ -0.43
SMAD3-208ENST00000558827 RAVER1Q8IY67 606 aaKnown RBP12.34□□□□□ -0.43
SMAD3-208ENST00000558827 UBL4BQ8N7F7 174 aa12.34□□□□□ -0.43
SMAD3-208ENST00000558827 BEND7Q8N7W2 519 aaPredicted RBP12.34□□□□□ -0.43
SMAD3-208ENST00000558827 OR4K2Q8NGD2 314 aa12.34□□□□□ -0.43
SMAD3-208ENST00000558827 ATG4AQ8WYN0 398 aa12.34□□□□□ -0.43
SMAD3-208ENST00000558827 CCDC97Q96F63 343 aaPredicted RBP12.34□□□□□ -0.43
SMAD3-208ENST00000558827 SPATA13Q96N96 652 aa12.34□□□□□ -0.43
SMAD3-208ENST00000558827 PLEKHG4BQ96PX9 1271 aa12.34□□□□□ -0.43
SMAD3-208ENST00000558827 CMKLR1Q99788 373 aa12.34□□□□□ -0.43
SMAD3-208ENST00000558827 RMI1Q9H9A7 625 aa12.34□□□□□ -0.43
SMAD3-208ENST00000558827 OCIAD1Q9NX40 245 aa12.34□□□□□ -0.43
SMAD3-208ENST00000558827 IMPACTQ9P2X3 320 aa12.34□□□□□ -0.43
SMAD3-208ENST00000558827 CPNE7Q9UBL6 633 aa12.34□□□□□ -0.43
SMAD3-208ENST00000558827 A6NCN8 305 aa12.33□□□□□ -0.44
SMAD3-208ENST00000558827 OR2AG2A6NM03 316 aa12.33□□□□□ -0.44
SMAD3-208ENST00000558827 OR52A4PA6NMU1 304 aa12.33□□□□□ -0.44
SMAD3-208ENST00000558827 C9orf172C9J069 976 aa12.33□□□□□ -0.44
SMAD3-208ENST00000558827 GAPDHSO14556 408 aaPredicted RBP12.33□□□□□ -0.44
SMAD3-208ENST00000558827 METTL18O95568 372 aa12.33□□□□□ -0.44
SMAD3-208ENST00000558827 FGF3P11487 239 aaPredicted RBP12.33□□□□□ -0.44
SMAD3-208ENST00000558827 F3P13726 295 aa12.33□□□□□ -0.44
SMAD3-208ENST00000558827 PTPN7P35236 360 aa12.33□□□□□ -0.44
SMAD3-208ENST00000558827 ADRA1AP35348 466 aa12.33□□□□□ -0.44
SMAD3-208ENST00000558827 SLC19A1P41440 591 aa12.33□□□□□ -0.44
SMAD3-208ENST00000558827 GPR3P46089 330 aa12.33□□□□□ -0.44
SMAD3-208ENST00000558827 LIMK2P53671 638 aa12.33□□□□□ -0.44
SMAD3-208ENST00000558827 GDF10P55107 478 aa12.33□□□□□ -0.44
SMAD3-208ENST00000558827 PEX6Q13608 980 aa12.33□□□□□ -0.44
SMAD3-208ENST00000558827 GTF2H3Q13889 308 aa12.33□□□□□ -0.44
SMAD3-208ENST00000558827 GPRC6AQ5T6X5 926 aa12.33□□□□□ -0.44
SMAD3-208ENST00000558827 KIAA1614Q5VZ46 1190 aa12.33□□□□□ -0.44
SMAD3-208ENST00000558827 ARHGEF18Q6ZSZ5 1173 aa12.33□□□□□ -0.44
SMAD3-208ENST00000558827 CLEC14AQ86T13 490 aa12.33□□□□□ -0.44
SMAD3-208ENST00000558827 SLC9B2Q86UD5 537 aa12.33□□□□□ -0.44
SMAD3-208ENST00000558827 FAM129CQ86XR2 697 aa12.33□□□□□ -0.44
SMAD3-208ENST00000558827 TRIM48Q8IWZ4 208 aa12.33□□□□□ -0.44
SMAD3-208ENST00000558827 RASGEF1AQ8N9B8 481 aa12.33□□□□□ -0.44
SMAD3-208ENST00000558827 OR13C4Q8NGS5 318 aa12.33□□□□□ -0.44
SMAD3-208ENST00000558827 OR10G6Q8NH81 332 aa12.33□□□□□ -0.44
SMAD3-208ENST00000558827 ZNF398Q8TD17 642 aa12.33□□□□□ -0.44
SMAD3-208ENST00000558827 CALR3Q96L12 384 aaKnown RBP12.33□□□□□ -0.44
SMAD3-208ENST00000558827 TTC25Q96NG3 672 aa12.33□□□□□ -0.44
SMAD3-208ENST00000558827 SRPK1Q96SB4 655 aaKnown RBP12.33□□□□□ -0.44
SMAD3-208ENST00000558827 CTRCQ99895 268 aa12.33□□□□□ -0.44
SMAD3-208ENST00000558827 TBL1YQ9BQ87 522 aa12.33□□□□□ -0.44
SMAD3-208ENST00000558827 FERMT1Q9BQL6 677 aa12.33□□□□□ -0.44
SMAD3-208ENST00000558827 TMEM121Q9BTD3 319 aa12.33□□□□□ -0.44
SMAD3-208ENST00000558827 TRABDQ9H4I3 376 aa12.33□□□□□ -0.44
SMAD3-208ENST00000558827 HACD3Q9P035 362 aa12.33□□□□□ -0.44
SMAD3-208ENST00000558827 ZNF624Q9P2J8 865 aaPredicted RBP12.33□□□□□ -0.44
SMAD3-208ENST00000558827 NFKBIL1Q9UBC1 381 aaPredicted RBP12.33□□□□□ -0.44
SMAD3-208ENST00000558827 PSMD13Q9UNM6 376 aa12.33□□□□□ -0.44
SMAD3-208ENST00000558827 EFR3BQ9Y2G0 817 aa12.33□□□□□ -0.44
SMAD3-208ENST00000558827 PKP3Q9Y446 797 aa12.33□□□□□ -0.44
SMAD3-208ENST00000558827 FASNP49327 2511 aaKnown RBP12.33□□□□□ -0.44
SMAD3-208ENST00000558827 GOLGA6L9A6NEM1 432 aa12.32□□□□□ -0.44
SMAD3-208ENST00000558827 EIF4E1BA6NMX2 242 aaKnown RBP12.32□□□□□ -0.44
SMAD3-208ENST00000558827 EFCAB7A8K855 629 aa12.32□□□□□ -0.44
SMAD3-208ENST00000558827 CHUKO15111 745 aa12.32□□□□□ -0.44
SMAD3-208ENST00000558827 VEGFDO43915 354 aa12.32□□□□□ -0.44
SMAD3-208ENST00000558827 POP7O75817 140 aaKnown RBP12.32□□□□□ -0.44
SMAD3-208ENST00000558827 VIPP01282 170 aa12.32□□□□□ -0.44
SMAD3-208ENST00000558827 PRSS56P0CW18 603 aa12.32□□□□□ -0.44
SMAD3-208ENST00000558827 BRAFP15056 766 aa12.32□□□□□ -0.44
SMAD3-208ENST00000558827 LPOP22079 712 aaPredicted RBP12.32□□□□□ -0.44
SMAD3-208ENST00000558827 AKT1P31749 480 aa12.32□□□□□ -0.44
SMAD3-208ENST00000558827 CSTF2P33240 577 aaKnown RBP eCLIP12.32□□□□□ -0.44
SMAD3-208ENST00000558827 FASLGP48023 281 aa12.32□□□□□ -0.44
SMAD3-208ENST00000558827 EIF3IQ13347 325 aaKnown RBP12.32□□□□□ -0.44
SMAD3-208ENST00000558827 SNX1Q13596 522 aa12.32□□□□□ -0.44
SMAD3-208ENST00000558827 COL9A2Q14055 689 aaPredicted RBP12.32□□□□□ -0.44
SMAD3-208ENST00000558827 NR1D2Q14995 579 aa12.32□□□□□ -0.44
SMAD3-208ENST00000558827 FNBP1LQ5T0N5 605 aa12.32□□□□□ -0.44
SMAD3-208ENST00000558827 PDPK2PQ6A1A2 396 aa12.32□□□□□ -0.44
SMAD3-208ENST00000558827 TMEM71Q6P5X7 295 aa12.32□□□□□ -0.44
SMAD3-208ENST00000558827 IGF2-ASQ6U949 168 aa12.32□□□□□ -0.44
SMAD3-208ENST00000558827 RANBP10Q6VN20 620 aa12.32□□□□□ -0.44
SMAD3-208ENST00000558827 FAM83HQ6ZRV2 1179 aaPredicted RBP12.32□□□□□ -0.44
SMAD3-208ENST00000558827 SYCE1Q8N0S2 351 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms