RNA–Protein interactions for RNA: ENST00000558763.1

SMAD3-207, Transcript of SMAD family member 3, humanhuman

TSL 2

Gene SMAD3, Length 1,957 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-207ENST00000558763 TMPRSS11EQ9UL52 423 aa12.82□□□□□ -0.36
SMAD3-207ENST00000558763 DUSP12Q9UNI6 340 aa12.82□□□□□ -0.36
SMAD3-207ENST00000558763 SORCS3Q9UPU3 1222 aa12.82□□□□□ -0.36
SMAD3-207ENST00000558763 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.82□□□□□ -0.36
SMAD3-207ENST00000558763 CDC7O00311 574 aa12.81□□□□□ -0.36
SMAD3-207ENST00000558763 HDAC3O15379 428 aa12.81□□□□□ -0.36
SMAD3-207ENST00000558763 VPS26AO75436 327 aa12.81□□□□□ -0.36
SMAD3-207ENST00000558763 APODP05090 189 aa12.81□□□□□ -0.36
SMAD3-207ENST00000558763 ITGALP20701 1170 aa12.81□□□□□ -0.36
SMAD3-207ENST00000558763 IMPDH1P20839 514 aa12.81□□□□□ -0.36
SMAD3-207ENST00000558763 GALK1P51570 392 aa12.81□□□□□ -0.36
SMAD3-207ENST00000558763 ALDH18A1P54886 795 aaKnown RBP12.81□□□□□ -0.36
SMAD3-207ENST00000558763 HERVK_113P63132 956 aa12.81□□□□□ -0.36
SMAD3-207ENST00000558763 ELF3P78545 371 aaPredicted RBP12.81□□□□□ -0.36
SMAD3-207ENST00000558763 RAD51Q06609 339 aa12.81□□□□□ -0.36
SMAD3-207ENST00000558763 GALNT1Q10472 559 aaPredicted RBP12.81□□□□□ -0.36
SMAD3-207ENST00000558763 PON2Q15165 354 aa12.81□□□□□ -0.36
SMAD3-207ENST00000558763 TSNQ15631 228 aaKnown RBP12.81□□□□□ -0.36
SMAD3-207ENST00000558763 UNC50Q53HI1 259 aa12.81□□□□□ -0.36
SMAD3-207ENST00000558763 BRAT1Q6PJG6 821 aa12.81□□□□□ -0.36
SMAD3-207ENST00000558763 NXPE1Q8N323 547 aa12.81□□□□□ -0.36
SMAD3-207ENST00000558763 ZNF366Q8N895 744 aa12.81□□□□□ -0.36
SMAD3-207ENST00000558763 FUBP1Q96AE4 644 aaKnown RBP12.81□□□□□ -0.36
SMAD3-207ENST00000558763 CNDP1Q96KN2 507 aa12.81□□□□□ -0.36
SMAD3-207ENST00000558763 ERVK-6Q9BXR3 956 aa12.81□□□□□ -0.36
SMAD3-207ENST00000558763 SLC2A4RGQ9NR83 387 aa12.81□□□□□ -0.36
SMAD3-207ENST00000558763 ELOVL2Q9NXB9 296 aa12.81□□□□□ -0.36
SMAD3-207ENST00000558763 F5P12259 2224 aa12.81□□□□□ -0.36
SMAD3-207ENST00000558763 LRRC14BA6NHZ5 514 aa12.81□□□□□ -0.36
SMAD3-207ENST00000558763 C19orf67A6NJJ6 358 aa12.81□□□□□ -0.36
SMAD3-207ENST00000558763 PRR5-ARHGAP8B1AHC4 643 aa12.81□□□□□ -0.36
SMAD3-207ENST00000558763 H0YHG0 523 aa12.81□□□□□ -0.36
SMAD3-207ENST00000558763 PFDN6O15212 129 aa12.81□□□□□ -0.36
SMAD3-207ENST00000558763 KLK8O60259 260 aa12.81□□□□□ -0.36
SMAD3-207ENST00000558763 CCDC22O60826 627 aa12.81□□□□□ -0.36
SMAD3-207ENST00000558763 ASLP04424 464 aa12.81□□□□□ -0.36
SMAD3-207ENST00000558763 PYGLP06737 847 aa12.81□□□□□ -0.36
SMAD3-207ENST00000558763 CD72P21854 359 aa12.81□□□□□ -0.36
SMAD3-207ENST00000558763 GRIA2P42262 883 aa12.81□□□□□ -0.36
SMAD3-207ENST00000558763 HK2P52789 917 aa12.81□□□□□ -0.36
SMAD3-207ENST00000558763 PTPN5P54829 565 aa12.81□□□□□ -0.36
SMAD3-207ENST00000558763 ATP6V0D1P61421 351 aa12.81□□□□□ -0.36
SMAD3-207ENST00000558763 ARHGAP8P85298 464 aa12.81□□□□□ -0.36
SMAD3-207ENST00000558763 B4GALNT1Q00973 533 aa12.81□□□□□ -0.36
SMAD3-207ENST00000558763 GPR33Q49SQ1 333 aa12.81□□□□□ -0.36
SMAD3-207ENST00000558763 CYHR1Q6ZMK1 362 aa12.81□□□□□ -0.36
SMAD3-207ENST00000558763 RALGPS2Q86X27 583 aaPredicted RBP12.81□□□□□ -0.36
SMAD3-207ENST00000558763 CPNE9Q8IYJ1 553 aa12.81□□□□□ -0.36
SMAD3-207ENST00000558763 RBFAQ8N0V3 343 aa12.81□□□□□ -0.36
SMAD3-207ENST00000558763 NKAPQ8N5F7 415 aaKnown RBP12.81□□□□□ -0.36
SMAD3-207ENST00000558763 CLDN19Q8N6F1 224 aa12.81□□□□□ -0.36
SMAD3-207ENST00000558763 EEF1AKMT1Q8WVE0 214 aa12.81□□□□□ -0.36
SMAD3-207ENST00000558763 NSL1Q96IY1 281 aa12.81□□□□□ -0.36
SMAD3-207ENST00000558763 RILPQ96NA2 401 aa12.81□□□□□ -0.36
SMAD3-207ENST00000558763 C8orf33Q9H7E9 229 aaPredicted RBP12.81□□□□□ -0.36
SMAD3-207ENST00000558763 TRMT6Q9UJA5 497 aaKnown RBP12.81□□□□□ -0.36
SMAD3-207ENST00000558763 CA14Q9ULX7 337 aa12.81□□□□□ -0.36
SMAD3-207ENST00000558763 APOBEC2Q9Y235 224 aaKnown RBP12.81□□□□□ -0.36
SMAD3-207ENST00000558763 DHRS7Q9Y394 339 aa12.81□□□□□ -0.36
SMAD3-207ENST00000558763 PCDHB1Q9Y5F3 818 aa12.81□□□□□ -0.36
SMAD3-207ENST00000558763 IGLV3-16A0A075B6K0 115 aa12.8□□□□□ -0.36
SMAD3-207ENST00000558763 A0A1W2PQ67 120 aa12.8□□□□□ -0.36
SMAD3-207ENST00000558763 NPEPPSL1A6NEC2 478 aa12.8□□□□□ -0.36
SMAD3-207ENST00000558763 F8W8V4 182 aa12.8□□□□□ -0.36
SMAD3-207ENST00000558763 SPINT1O43278 529 aa12.8□□□□□ -0.36
SMAD3-207ENST00000558763 DIAPH2O60879 1101 aa12.8□□□□□ -0.36
SMAD3-207ENST00000558763 SIX3O95343 332 aaPredicted RBP12.8□□□□□ -0.36
SMAD3-207ENST00000558763 TIMP2P16035 220 aa12.8□□□□□ -0.36
SMAD3-207ENST00000558763 AOC1P19801 751 aa12.8□□□□□ -0.36
SMAD3-207ENST00000558763 CALB2P22676 271 aa12.8□□□□□ -0.36
SMAD3-207ENST00000558763 SPINT3P49223 89 aa12.8□□□□□ -0.36
SMAD3-207ENST00000558763 HK3P52790 923 aa12.8□□□□□ -0.36
SMAD3-207ENST00000558763 SEC13P55735 322 aa12.8□□□□□ -0.36
SMAD3-207ENST00000558763 RALGDSQ12967 914 aa12.8□□□□□ -0.36
SMAD3-207ENST00000558763 EIF4HQ15056 248 aaKnown RBP12.8□□□□□ -0.36
SMAD3-207ENST00000558763 ATP13A5Q4VNC0 1218 aa12.8□□□□□ -0.36
SMAD3-207ENST00000558763 SLC44A4Q53GD3 710 aa12.8□□□□□ -0.36
SMAD3-207ENST00000558763 ARSIQ5FYB1 569 aa12.8□□□□□ -0.36
SMAD3-207ENST00000558763 SEL1L3Q68CR1 1132 aa12.8□□□□□ -0.36
SMAD3-207ENST00000558763 CYB5D1Q6P9G0 228 aa12.8□□□□□ -0.36
SMAD3-207ENST00000558763 PAF1Q8N7H5 531 aa12.8□□□□□ -0.36
SMAD3-207ENST00000558763 PTGR2Q8N8N7 351 aaPredicted RBP12.8□□□□□ -0.36
SMAD3-207ENST00000558763 FBXO27Q8NI29 283 aa12.8□□□□□ -0.36
SMAD3-207ENST00000558763 EZH1Q92800 747 aaPredicted RBP12.8□□□□□ -0.36
SMAD3-207ENST00000558763 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.8□□□□□ -0.36
SMAD3-207ENST00000558763 MAELQ96JY0 434 aaKnown RBP12.8□□□□□ -0.36
SMAD3-207ENST00000558763 PLEKHG4BQ96PX9 1271 aa12.8□□□□□ -0.36
SMAD3-207ENST00000558763 TBC1D10AQ9BXI6 508 aa12.8□□□□□ -0.36
SMAD3-207ENST00000558763 WDR55Q9H6Y2 383 aaPredicted RBP12.8□□□□□ -0.36
SMAD3-207ENST00000558763 MBD1Q9UIS9 605 aaPredicted RBP12.8□□□□□ -0.36
SMAD3-207ENST00000558763 MGRN1O60291 552 aa12.8□□□□□ -0.36
SMAD3-207ENST00000558763 SNUPNO95149 360 aaKnown RBP12.8□□□□□ -0.36
SMAD3-207ENST00000558763 ZNF7P17097 686 aaPredicted RBP12.8□□□□□ -0.36
SMAD3-207ENST00000558763 PTPN4P29074 926 aa12.8□□□□□ -0.36
SMAD3-207ENST00000558763 RECQLP46063 649 aaPredicted RBP12.8□□□□□ -0.36
SMAD3-207ENST00000558763 PREPLQ4J6C6 727 aaPredicted RBP12.8□□□□□ -0.36
SMAD3-207ENST00000558763 SH2D4BQ5SQS7 431 aa12.8□□□□□ -0.36
SMAD3-207ENST00000558763 MACC1Q6ZN28 852 aa12.8□□□□□ -0.36
SMAD3-207ENST00000558763 CUZD1Q86UP6 607 aa12.8□□□□□ -0.36
SMAD3-207ENST00000558763 PACS2Q86VP3 889 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms