RNA–Protein interactions for RNA: ENST00000558745.5

TSPAN3-205, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,340 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-205ENST00000558745 CTAGE9A4FU28 777 aa13.64□□□□□ -0.23
TSPAN3-205ENST00000558745 MROH6A6NGR9 719 aa13.64□□□□□ -0.23
TSPAN3-205ENST00000558745 AGRPO00253 132 aa13.64□□□□□ -0.23
TSPAN3-205ENST00000558745 CES2O00748 559 aa13.64□□□□□ -0.23
TSPAN3-205ENST00000558745 VEGFDO43915 354 aa13.64□□□□□ -0.23
TSPAN3-205ENST00000558745 AVILO75366 819 aa13.64□□□□□ -0.23
TSPAN3-205ENST00000558745 ZNF7P17097 686 aaPredicted RBP13.64□□□□□ -0.23
TSPAN3-205ENST00000558745 CCL7P80098 99 aa13.64□□□□□ -0.23
TSPAN3-205ENST00000558745 B4GALNT1Q00973 533 aa13.64□□□□□ -0.23
TSPAN3-205ENST00000558745 PDE1BQ01064 536 aa13.64□□□□□ -0.23
TSPAN3-205ENST00000558745 NFATC2Q13469 925 aa13.64□□□□□ -0.23
TSPAN3-205ENST00000558745 ITGA9Q13797 1035 aa13.64□□□□□ -0.23
TSPAN3-205ENST00000558745 SEPT7Q16181 437 aaKnown RBP13.64□□□□□ -0.23
TSPAN3-205ENST00000558745 ZNF534Q76KX8 674 aa13.64□□□□□ -0.23
TSPAN3-205ENST00000558745 TAS2R42Q7RTR8 314 aa13.64□□□□□ -0.23
TSPAN3-205ENST00000558745 TMPRSS12Q86WS5 348 aa13.64□□□□□ -0.23
TSPAN3-205ENST00000558745 C17orf82Q86X59 251 aaPredicted RBP13.64□□□□□ -0.23
TSPAN3-205ENST00000558745 KLHL7Q8IXQ5 586 aa13.64□□□□□ -0.23
TSPAN3-205ENST00000558745 PIANPQ8IYJ0 282 aa13.64□□□□□ -0.23
TSPAN3-205ENST00000558745 DDHD1Q8NEL9 900 aa13.64□□□□□ -0.23
TSPAN3-205ENST00000558745 STYXQ8WUJ0 223 aa13.64□□□□□ -0.23
TSPAN3-205ENST00000558745 TTC25Q96NG3 672 aa13.64□□□□□ -0.23
TSPAN3-205ENST00000558745 NAP1L3Q99457 506 aaPredicted RBP13.64□□□□□ -0.23
TSPAN3-205ENST00000558745 CHRAC1Q9NRG0 131 aa13.64□□□□□ -0.23
TSPAN3-205ENST00000558745 CRLS1Q9UJA2 301 aa13.64□□□□□ -0.23
TSPAN3-205ENST00000558745 APPL1Q9UKG1 709 aa13.64□□□□□ -0.23
TSPAN3-205ENST00000558745 PCDHB1Q9Y5F3 818 aa13.64□□□□□ -0.23
TSPAN3-205ENST00000558745 SAR1BQ9Y6B6 198 aa13.64□□□□□ -0.23
TSPAN3-205ENST00000558745 AKAP13Q12802 2813 aa13.63□□□□□ -0.23
TSPAN3-205ENST00000558745 ZZEF1O43149 2961 aa13.63□□□□□ -0.23
TSPAN3-205ENST00000558745 PRAMEF33A0A0G2JMD5 474 aa13.63□□□□□ -0.23
TSPAN3-205ENST00000558745 CCDC162PA2VCL2 907 aa13.63□□□□□ -0.23
TSPAN3-205ENST00000558745 GOLGA8MH3BSY2 632 aa13.63□□□□□ -0.23
TSPAN3-205ENST00000558745 KMOO15229 486 aa13.63□□□□□ -0.23
TSPAN3-205ENST00000558745 B4GAT1O43505 415 aa13.63□□□□□ -0.23
TSPAN3-205ENST00000558745 POP7O75817 140 aaKnown RBP13.63□□□□□ -0.23
TSPAN3-205ENST00000558745 GP1BAP07359 652 aa13.63□□□□□ -0.23
TSPAN3-205ENST00000558745 MSH3P20585 1137 aa13.63□□□□□ -0.23
TSPAN3-205ENST00000558745 ADRA1DP25100 572 aa13.63□□□□□ -0.23
TSPAN3-205ENST00000558745 MGAT1P26572 445 aa13.63□□□□□ -0.23
TSPAN3-205ENST00000558745 AKT1P31749 480 aa13.63□□□□□ -0.23
TSPAN3-205ENST00000558745 HADHAP40939 763 aa13.63□□□□□ -0.23
TSPAN3-205ENST00000558745 DRG2P55039 364 aaKnown RBP13.63□□□□□ -0.23
TSPAN3-205ENST00000558745 OR1D5P58170 312 aa13.63□□□□□ -0.23
TSPAN3-205ENST00000558745 CAMK2BQ13554 666 aa13.63□□□□□ -0.23
TSPAN3-205ENST00000558745 GTF2H3Q13889 308 aa13.63□□□□□ -0.23
TSPAN3-205ENST00000558745 LRP8Q14114 963 aa13.63□□□□□ -0.23
TSPAN3-205ENST00000558745 KCNJ11Q14654 390 aa13.63□□□□□ -0.23
TSPAN3-205ENST00000558745 INSCQ1MX18 579 aa13.63□□□□□ -0.23
TSPAN3-205ENST00000558745 LDLRAP1Q5SW96 308 aa13.63□□□□□ -0.23
TSPAN3-205ENST00000558745 FNBP1LQ5T0N5 605 aa13.63□□□□□ -0.23
TSPAN3-205ENST00000558745 TSTD2Q5T7W7 516 aa13.63□□□□□ -0.23
TSPAN3-205ENST00000558745 CDCP2Q5VXM1 449 aa13.63□□□□□ -0.23
TSPAN3-205ENST00000558745 CES3Q6UWW8 571 aa13.63□□□□□ -0.23
TSPAN3-205ENST00000558745 C4orf22Q6V702 233 aa13.63□□□□□ -0.23
TSPAN3-205ENST00000558745 FAM83HQ6ZRV2 1179 aaPredicted RBP13.63□□□□□ -0.23
TSPAN3-205ENST00000558745 SNX20Q7Z614 316 aa13.63□□□□□ -0.23
TSPAN3-205ENST00000558745 TRAPPC5Q8IUR0 188 aa13.63□□□□□ -0.23
TSPAN3-205ENST00000558745 GALNT15Q8N3T1 639 aa13.63□□□□□ -0.23
TSPAN3-205ENST00000558745 OR13J1Q8NGT2 312 aa13.63□□□□□ -0.23
TSPAN3-205ENST00000558745 CPT1BQ92523 772 aa13.63□□□□□ -0.23
TSPAN3-205ENST00000558745 GATA6Q92908 595 aa13.63□□□□□ -0.23
TSPAN3-205ENST00000558745 HDAC10Q969S8 669 aa13.63□□□□□ -0.23
TSPAN3-205ENST00000558745 OSGEPL1Q9H4B0 414 aa13.63□□□□□ -0.23
TSPAN3-205ENST00000558745 EIF2B3Q9NR50 452 aaKnown RBP13.63□□□□□ -0.23
TSPAN3-205ENST00000558745 KCND1Q9NSA2 647 aa13.63□□□□□ -0.23
TSPAN3-205ENST00000558745 EVA1BQ9NVM1 165 aa13.63□□□□□ -0.23
TSPAN3-205ENST00000558745 NCKIPSDQ9NZQ3 722 aa13.63□□□□□ -0.23
TSPAN3-205ENST00000558745 ATXN7L1Q9ULK2 861 aaPredicted RBP13.63□□□□□ -0.23
TSPAN3-205ENST00000558745 CLCA2Q9UQC9 943 aa13.63□□□□□ -0.23
TSPAN3-205ENST00000558745 SLC30A1Q9Y6M5 507 aa13.63□□□□□ -0.23
TSPAN3-205ENST00000558745 ZFC3H1O60293 1989 aaKnown RBP13.62□□□□□ -0.23
TSPAN3-205ENST00000558745 TRABD2BA6NFA1 517 aa13.62□□□□□ -0.23
TSPAN3-205ENST00000558745 AGAP14A8MT82 685 aa13.62□□□□□ -0.23
TSPAN3-205ENST00000558745 SGTAO43765 313 aa13.62□□□□□ -0.23
TSPAN3-205ENST00000558745 TMEM63AO94886 807 aa13.62□□□□□ -0.23
TSPAN3-205ENST00000558745 RPLP0P05388 317 aaKnown RBP13.62□□□□□ -0.23
TSPAN3-205ENST00000558745 GLB1P16278 677 aa13.62□□□□□ -0.23
TSPAN3-205ENST00000558745 TPSB2P20231 275 aa13.62□□□□□ -0.23
TSPAN3-205ENST00000558745 ITGALP20701 1170 aa13.62□□□□□ -0.23
TSPAN3-205ENST00000558745 RPL10P27635 214 aaKnown RBP13.62□□□□□ -0.23
TSPAN3-205ENST00000558745 ALDH4A1P30038 563 aa13.62□□□□□ -0.23
TSPAN3-205ENST00000558745 PBLDP30039 288 aaPredicted RBP13.62□□□□□ -0.23
TSPAN3-205ENST00000558745 PTGIRP43119 386 aa13.62□□□□□ -0.23
TSPAN3-205ENST00000558745 MRPS25P82663 173 aaKnown RBP13.62□□□□□ -0.23
TSPAN3-205ENST00000558745 TPSAB1Q15661 275 aa13.62□□□□□ -0.23
TSPAN3-205ENST00000558745 SKIDA1Q1XH10 827 aa13.62□□□□□ -0.23
TSPAN3-205ENST00000558745 NKAIN2Q5VXU1 208 aa13.62□□□□□ -0.23
TSPAN3-205ENST00000558745 IYDQ6PHW0 289 aa13.62□□□□□ -0.23
TSPAN3-205ENST00000558745 UNQ6494/PRO21346Q6UXR6 183 aa13.62□□□□□ -0.23
TSPAN3-205ENST00000558745 SYT10Q6XYQ8 523 aa13.62□□□□□ -0.23
TSPAN3-205ENST00000558745 SERPINA9Q86WD7 417 aa13.62□□□□□ -0.23
TSPAN3-205ENST00000558745 NXPE1Q8N323 547 aa13.62□□□□□ -0.23
TSPAN3-205ENST00000558745 MPP5Q8N3R9 675 aa13.62□□□□□ -0.23
TSPAN3-205ENST00000558745 KDF1Q8NAX2 398 aaPredicted RBP13.62□□□□□ -0.23
TSPAN3-205ENST00000558745 SLC37A2Q8TED4 501 aa13.62□□□□□ -0.23
TSPAN3-205ENST00000558745 NAT6Q93015 286 aa13.62□□□□□ -0.23
TSPAN3-205ENST00000558745 TRIM56Q9BRZ2 755 aaKnown RBP13.62□□□□□ -0.23
TSPAN3-205ENST00000558745 SMOXQ9NWM0 555 aa13.62□□□□□ -0.23
TSPAN3-205ENST00000558745 SYBUQ9NX95 663 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms