RNA–Protein interactions for RNA: ENST00000558264.5

TPM1-210, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 2,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-210ENST00000558264 SLC22A2O15244 555 aa10.45□□□□□ -0.74
TPM1-210ENST00000558264 RPS17P08708 135 aaKnown RBP10.45□□□□□ -0.74
TPM1-210ENST00000558264 HSPA1AP0DMV8 641 aaKnown RBP10.45□□□□□ -0.74
TPM1-210ENST00000558264 HSPA1BP0DMV9 641 aaKnown RBP10.45□□□□□ -0.74
TPM1-210ENST00000558264 SRCP12931 536 aa10.45□□□□□ -0.74
TPM1-210ENST00000558264 GPX3P22352 226 aa10.45□□□□□ -0.74
TPM1-210ENST00000558264 LRP8Q14114 963 aa10.45□□□□□ -0.74
TPM1-210ENST00000558264 TEAD2Q15562 447 aa10.45□□□□□ -0.74
TPM1-210ENST00000558264 POM121L1PQ3SYA9 428 aa10.45□□□□□ -0.74
TPM1-210ENST00000558264 MPPE1Q53F39 396 aa10.45□□□□□ -0.74
TPM1-210ENST00000558264 AARS2Q5JTZ9 985 aaKnown RBP10.45□□□□□ -0.74
TPM1-210ENST00000558264 HTR3DQ70Z44 454 aa10.45□□□□□ -0.74
TPM1-210ENST00000558264 ADGRG2Q8IZP9 1017 aa10.45□□□□□ -0.74
TPM1-210ENST00000558264 PLCD3Q8N3E9 789 aa10.45□□□□□ -0.74
TPM1-210ENST00000558264 SORCS1Q8WY21 1168 aa10.45□□□□□ -0.74
TPM1-210ENST00000558264 CLPBQ9H078 707 aa10.45□□□□□ -0.74
TPM1-210ENST00000558264 LINC00597Q9H2U6 94 aa10.45□□□□□ -0.74
TPM1-210ENST00000558264 COPS7BQ9H9Q2 264 aaPredicted RBP10.45□□□□□ -0.74
TPM1-210ENST00000558264 ASAH2Q9NR71 780 aa10.45□□□□□ -0.74
TPM1-210ENST00000558264 HACD3Q9P035 362 aa10.45□□□□□ -0.74
TPM1-210ENST00000558264 HECAQ9UBI9 543 aaPredicted RBP10.45□□□□□ -0.74
TPM1-210ENST00000558264 CD84Q9UIB8 345 aa10.45□□□□□ -0.74
TPM1-210ENST00000558264 CRLS1Q9UJA2 301 aa10.45□□□□□ -0.74
TPM1-210ENST00000558264 LRCH1Q9Y2L9 728 aa10.45□□□□□ -0.74
TPM1-210ENST00000558264 PRORSD1PA6NEY8 169 aa10.44□□□□□ -0.74
TPM1-210ENST00000558264 SYCE1LA8MT33 242 aa10.44□□□□□ -0.74
TPM1-210ENST00000558264 PFDN6O15212 129 aa10.44□□□□□ -0.74
TPM1-210ENST00000558264 SNUPNO95149 360 aaKnown RBP10.44□□□□□ -0.74
TPM1-210ENST00000558264 SLC25A14O95258 325 aaPredicted RBP10.44□□□□□ -0.74
TPM1-210ENST00000558264 LATS1O95835 1130 aa10.44□□□□□ -0.74
TPM1-210ENST00000558264 IGSF6O95976 241 aa10.44□□□□□ -0.74
TPM1-210ENST00000558264 ESR1P03372 595 aa10.44□□□□□ -0.74
TPM1-210ENST00000558264 LINC00271P0C7V0 271 aa10.44□□□□□ -0.74
TPM1-210ENST00000558264 ADSLP30566 484 aaPredicted RBP10.44□□□□□ -0.74
TPM1-210ENST00000558264 PPM1AP35813 382 aa10.44□□□□□ -0.74
TPM1-210ENST00000558264 GDF5P43026 501 aa10.44□□□□□ -0.74
TPM1-210ENST00000558264 PIK3CGP48736 1102 aa10.44□□□□□ -0.74
TPM1-210ENST00000558264 NFATC2Q13469 925 aa10.44□□□□□ -0.74
TPM1-210ENST00000558264 BLMHQ13867 455 aa10.44□□□□□ -0.74
TPM1-210ENST00000558264 TMEM154Q6P9G4 183 aa10.44□□□□□ -0.74
TPM1-210ENST00000558264 MBOAT1Q6ZNC8 495 aa10.44□□□□□ -0.74
TPM1-210ENST00000558264 Q6ZVU0 165 aa10.44□□□□□ -0.74
TPM1-210ENST00000558264 PHYKPLQ8IUZ5 450 aa10.44□□□□□ -0.74
TPM1-210ENST00000558264 FAM217AQ8IXS0 508 aa10.44□□□□□ -0.74
TPM1-210ENST00000558264 GPR26Q8NDV2 337 aa10.44□□□□□ -0.74
TPM1-210ENST00000558264 OR2AP1Q8NGE2 309 aa10.44□□□□□ -0.74
TPM1-210ENST00000558264 OR2T11Q8NH01 316 aa10.44□□□□□ -0.74
TPM1-210ENST00000558264 TEX37Q96LM6 180 aa10.44□□□□□ -0.74
TPM1-210ENST00000558264 GCNAQ96QF7 691 aa10.44□□□□□ -0.74
TPM1-210ENST00000558264 MTG2Q9H4K7 406 aa10.44□□□□□ -0.74
TPM1-210ENST00000558264 ATP13A3Q9H7F0 1226 aa10.44□□□□□ -0.74
TPM1-210ENST00000558264 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.44□□□□□ -0.74
TPM1-210ENST00000558264 KIAA1522Q9P206 1035 aaPredicted RBP10.44□□□□□ -0.74
TPM1-210ENST00000558264 KIAA1671Q9BY89 1806 aa10.44□□□□□ -0.74
TPM1-210ENST00000558264 LTBP2Q14767 1821 aa10.44□□□□□ -0.74
TPM1-210ENST00000558264 GLYATL1P3A0A0U1RQE8 302 aa10.44□□□□□ -0.74
TPM1-210ENST00000558264 KRT87PA6NCN2 255 aa10.44□□□□□ -0.74
TPM1-210ENST00000558264 H7C0S8 307 aa10.44□□□□□ -0.74
TPM1-210ENST00000558264 NRP2O60462 931 aa10.44□□□□□ -0.74
TPM1-210ENST00000558264 PENKP01210 267 aaPredicted RBP10.44□□□□□ -0.74
TPM1-210ENST00000558264 UGT2B4P06133 528 aa10.44□□□□□ -0.74
TPM1-210ENST00000558264 ZCCHC18P0CG32 403 aa10.44□□□□□ -0.74
TPM1-210ENST00000558264 CHRM1P11229 460 aaPredicted RBP10.44□□□□□ -0.74
TPM1-210ENST00000558264 CAPN3P20807 821 aa10.44□□□□□ -0.74
TPM1-210ENST00000558264 RFC2P35250 354 aa10.44□□□□□ -0.74
TPM1-210ENST00000558264 HTR6P50406 440 aa10.44□□□□□ -0.74
TPM1-210ENST00000558264 SLC7A2P52569 658 aa10.44□□□□□ -0.74
TPM1-210ENST00000558264 SLC7A9P82251 487 aa10.44□□□□□ -0.74
TPM1-210ENST00000558264 KLC1Q07866 573 aa10.44□□□□□ -0.74
TPM1-210ENST00000558264 STX5Q13190 355 aa10.44□□□□□ -0.74
TPM1-210ENST00000558264 CBX2Q14781 532 aaPredicted RBP10.44□□□□□ -0.74
TPM1-210ENST00000558264 RPS6KA2Q15349 733 aa10.44□□□□□ -0.74
TPM1-210ENST00000558264 SLC5A9Q2M3M2 681 aa10.44□□□□□ -0.74
TPM1-210ENST00000558264 C1orf53Q5VUE5 145 aa10.44□□□□□ -0.74
TPM1-210ENST00000558264 LRRC66Q68CR7 880 aa10.44□□□□□ -0.74
TPM1-210ENST00000558264 LILRA6Q6PI73 481 aa10.44□□□□□ -0.74
TPM1-210ENST00000558264 DET1Q7L5Y6 550 aa10.44□□□□□ -0.74
TPM1-210ENST00000558264 ELMOD1Q8N336 334 aa10.44□□□□□ -0.74
TPM1-210ENST00000558264 CHST14Q8NCH0 376 aa10.44□□□□□ -0.74
TPM1-210ENST00000558264 ING5Q8WYH8 240 aa10.44□□□□□ -0.74
TPM1-210ENST00000558264 VPS33AQ96AX1 596 aa10.44□□□□□ -0.74
TPM1-210ENST00000558264 ANKRD27Q96NW4 1050 aa10.44□□□□□ -0.74
TPM1-210ENST00000558264 NSUN3Q9H649 340 aaKnown RBP10.44□□□□□ -0.74
TPM1-210ENST00000558264 NOL11Q9H8H0 719 aaKnown RBP10.44□□□□□ -0.74
TPM1-210ENST00000558264 FAM8A1Q9UBU6 413 aa10.44□□□□□ -0.74
TPM1-210ENST00000558264 MBD1Q9UIS9 605 aaPredicted RBP10.44□□□□□ -0.74
TPM1-210ENST00000558264 VPS9D1Q9Y2B5 631 aa10.44□□□□□ -0.74
TPM1-210ENST00000558264 GBF1Q92538 1859 aa10.44□□□□□ -0.74
TPM1-210ENST00000558264 CAPN8A6NHC0 703 aa10.43□□□□□ -0.74
TPM1-210ENST00000558264 E2F3O00716 465 aa10.43□□□□□ -0.74
TPM1-210ENST00000558264 TXNDC9O14530 226 aa10.43□□□□□ -0.74
TPM1-210ENST00000558264 ADH1AP07327 375 aa10.43□□□□□ -0.74
TPM1-210ENST00000558264 FGF4P08620 206 aa10.43□□□□□ -0.74
TPM1-210ENST00000558264 PSMA3P25788 255 aa10.43□□□□□ -0.74
TPM1-210ENST00000558264 CASP2P42575 452 aa10.43□□□□□ -0.74
TPM1-210ENST00000558264 HSPA7P48741 367 aa10.43□□□□□ -0.74
TPM1-210ENST00000558264 LETMD1Q6P1Q0 360 aa10.43□□□□□ -0.74
TPM1-210ENST00000558264 DPY19L3Q6ZPD9 716 aa10.43□□□□□ -0.74
TPM1-210ENST00000558264 TMEM199Q8N511 208 aa10.43□□□□□ -0.74
TPM1-210ENST00000558264 ZNF366Q8N895 744 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms