RNA–Protein interactions for RNA: ENST00000558155.1

SPG11-208, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-208ENST00000558155 ARHGAP36Q6ZRI8 547 aa5.1□□□□□ -1.59
SPG11-208ENST00000558155 RFLNAQ6ZTI6 216 aa5.1□□□□□ -1.59
SPG11-208ENST00000558155 FAM92BQ6ZTR7 304 aa5.1□□□□□ -1.59
SPG11-208ENST00000558155 RFX8Q6ZV50 586 aa5.1□□□□□ -1.59
SPG11-208ENST00000558155 ZGRF1Q86YA3 2104 aa5.1□□□□□ -1.59
SPG11-208ENST00000558155 MCEMP1Q8IX19 187 aa5.1□□□□□ -1.59
SPG11-208ENST00000558155 RBM12BQ8IXT5 1001 aaKnown RBP5.1□□□□□ -1.59
SPG11-208ENST00000558155 AOPEPQ8N6M6 819 aa5.1□□□□□ -1.59
SPG11-208ENST00000558155 C3orf20Q8ND61 904 aa5.1□□□□□ -1.59
SPG11-208ENST00000558155 ST6GALNAC3Q8NDV1 305 aa5.1□□□□□ -1.59
SPG11-208ENST00000558155 OR8K5Q8NH50 307 aa5.1□□□□□ -1.59
SPG11-208ENST00000558155 EPS8L1Q8TE68 723 aa5.1□□□□□ -1.59
SPG11-208ENST00000558155 FNIP1Q8TF40 1166 aa5.1□□□□□ -1.59
SPG11-208ENST00000558155 PIH1D2Q8WWB5 315 aa5.1□□□□□ -1.59
SPG11-208ENST00000558155 SGSM3Q96HU1 749 aa5.1□□□□□ -1.59
SPG11-208ENST00000558155 NSMCE3Q96MG7 304 aa5.1□□□□□ -1.59
SPG11-208ENST00000558155 MCCC1Q96RQ3 725 aaPredicted RBP5.1□□□□□ -1.59
SPG11-208ENST00000558155 AGAP2Q99490 1192 aa5.1□□□□□ -1.59
SPG11-208ENST00000558155 CNPY3Q9BT09 278 aa5.1□□□□□ -1.59
SPG11-208ENST00000558155 RIOK2Q9BVS4 552 aaKnown RBP5.1□□□□□ -1.59
SPG11-208ENST00000558155 NUDT9Q9BW91 350 aa5.1□□□□□ -1.59
SPG11-208ENST00000558155 NAA15Q9BXJ9 866 aaKnown RBP5.1□□□□□ -1.59
SPG11-208ENST00000558155 UNKQ9C0B0 810 aaKnown RBP5.1□□□□□ -1.59
SPG11-208ENST00000558155 CARD9Q9H257 536 aa5.1□□□□□ -1.59
SPG11-208ENST00000558155 VPS16Q9H269 839 aa5.1□□□□□ -1.59
SPG11-208ENST00000558155 ZNF106Q9H2Y7 1883 aaKnown RBP5.1□□□□□ -1.59
SPG11-208ENST00000558155 FAM83DQ9H4H8 585 aa5.1□□□□□ -1.59
SPG11-208ENST00000558155 DHX35Q9H5Z1 703 aaKnown RBP5.1□□□□□ -1.59
SPG11-208ENST00000558155 AKIRIN1Q9H9L7 192 aaPredicted RBP5.1□□□□□ -1.59
SPG11-208ENST00000558155 KCND1Q9NSA2 647 aa5.1□□□□□ -1.59
SPG11-208ENST00000558155 KLC4Q9NSK0 619 aa5.1□□□□□ -1.59
SPG11-208ENST00000558155 POT1Q9NUX5 634 aa5.1□□□□□ -1.59
SPG11-208ENST00000558155 OGFRQ9NZT2 677 aa5.1□□□□□ -1.59
SPG11-208ENST00000558155 SEMA5BQ9P283 1151 aa5.1□□□□□ -1.59
SPG11-208ENST00000558155 CNOT6Q9ULM6 557 aaKnown RBP5.1□□□□□ -1.59
SPG11-208ENST00000558155 SNX7Q9UNH6 387 aa5.1□□□□□ -1.59
SPG11-208ENST00000558155 AP4E1Q9UPM8 1137 aa5.1□□□□□ -1.59
SPG11-208ENST00000558155 B3GNT3Q9Y2A9 372 aa5.1□□□□□ -1.59
SPG11-208ENST00000558155 PIKFYVEQ9Y2I7 2098 aa5.1□□□□□ -1.59
SPG11-208ENST00000558155 FHOD1Q9Y613 1164 aa5.1□□□□□ -1.59
SPG11-208ENST00000558155 SLC30A1Q9Y6M5 507 aa5.1□□□□□ -1.59
SPG11-208ENST00000558155 MED13LQ71F56 2210 aa5.09□□□□□ -1.59
SPG11-208ENST00000558155 FER1L5A0AVI2 2057 aa5.09□□□□□ -1.59
SPG11-208ENST00000558155 A0A0J9YYE9 177 aa5.09□□□□□ -1.59
SPG11-208ENST00000558155 A0A1B0GUH1 482 aa5.09□□□□□ -1.59
SPG11-208ENST00000558155 RGSL1A5PLK6 1076 aa5.09□□□□□ -1.59
SPG11-208ENST00000558155 GPR89AB7ZAQ6 455 aa5.09□□□□□ -1.59
SPG11-208ENST00000558155 PRSS44E7EML9 344 aa5.09□□□□□ -1.59
SPG11-208ENST00000558155 PES1O00541 588 aaKnown RBP5.09□□□□□ -1.59
SPG11-208ENST00000558155 KIF1CO43896 1103 aaKnown RBP5.09□□□□□ -1.59
SPG11-208ENST00000558155 CPNE3O75131 537 aaKnown RBP5.09□□□□□ -1.59
SPG11-208ENST00000558155 GFPT2O94808 682 aa5.09□□□□□ -1.59
SPG11-208ENST00000558155 IPO13O94829 963 aaKnown RBP5.09□□□□□ -1.59
SPG11-208ENST00000558155 TIAF1O95411 115 aa5.09□□□□□ -1.59
SPG11-208ENST00000558155 JCHAINP01591 159 aa5.09□□□□□ -1.59
SPG11-208ENST00000558155 TRBC1P01850 177 aa5.09□□□□□ -1.59
SPG11-208ENST00000558155 IGHEP01854 428 aa5.09□□□□□ -1.59
SPG11-208ENST00000558155 ALPPP05187 535 aa5.09□□□□□ -1.59
SPG11-208ENST00000558155 GPR89BP0CG08 455 aa5.09□□□□□ -1.59
SPG11-208ENST00000558155 UNGP13051 313 aaPredicted RBP5.09□□□□□ -1.59
SPG11-208ENST00000558155 FOLR1P15328 257 aa5.09□□□□□ -1.59
SPG11-208ENST00000558155 CHRNB2P17787 502 aa5.09□□□□□ -1.59
SPG11-208ENST00000558155 TNFAIP3P21580 790 aa5.09□□□□□ -1.59
SPG11-208ENST00000558155 IDSP22304 550 aa5.09□□□□□ -1.59
SPG11-208ENST00000558155 GCGRP47871 477 aa5.09□□□□□ -1.59
SPG11-208ENST00000558155 STC1P52823 247 aa5.09□□□□□ -1.59
SPG11-208ENST00000558155 HSD11B2P80365 405 aa5.09□□□□□ -1.59
SPG11-208ENST00000558155 FMO1Q01740 532 aa5.09□□□□□ -1.59
SPG11-208ENST00000558155 TRAF2Q12933 501 aa5.09□□□□□ -1.59
SPG11-208ENST00000558155 PTP4A2Q12974 167 aa5.09□□□□□ -1.59
SPG11-208ENST00000558155 IL10RAQ13651 578 aa5.09□□□□□ -1.59
SPG11-208ENST00000558155 PTPRRQ15256 657 aa5.09□□□□□ -1.59
SPG11-208ENST00000558155 ZRSR2Q15696 482 aaKnown RBP5.09□□□□□ -1.59
SPG11-208ENST00000558155 MSS51Q4VC12 460 aa5.09□□□□□ -1.59
SPG11-208ENST00000558155 TMTC4Q5T4D3 741 aa5.09□□□□□ -1.59
SPG11-208ENST00000558155 VWA5B1Q5TIE3 1220 aa5.09□□□□□ -1.59
SPG11-208ENST00000558155 MARC1Q5VT66 337 aa5.09□□□□□ -1.59
SPG11-208ENST00000558155 DNAJC24Q6P3W2 148 aa5.09□□□□□ -1.59
SPG11-208ENST00000558155 ABRAXAS1Q6UWZ7 409 aa5.09□□□□□ -1.59
SPG11-208ENST00000558155 IGFL3Q6UXB1 125 aa5.09□□□□□ -1.59
SPG11-208ENST00000558155 WASH2PQ6VEQ5 465 aa5.09□□□□□ -1.59
SPG11-208ENST00000558155 KMT5CQ86Y97 462 aa5.09□□□□□ -1.59
SPG11-208ENST00000558155 PHF13Q86YI8 300 aaPredicted RBP5.09□□□□□ -1.59
SPG11-208ENST00000558155 TMEM126BQ8IUX1 230 aa5.09□□□□□ -1.59
SPG11-208ENST00000558155 ARHGAP12Q8IWW6 846 aa5.09□□□□□ -1.59
SPG11-208ENST00000558155 ZADH2Q8N4Q0 377 aa5.09□□□□□ -1.59
SPG11-208ENST00000558155 CCHCR1Q8TD31 782 aa5.09□□□□□ -1.59
SPG11-208ENST00000558155 ADAMTS17Q8TE56 1095 aa5.09□□□□□ -1.59
SPG11-208ENST00000558155 SLC20A1Q8WUM9 679 aa5.09□□□□□ -1.59
SPG11-208ENST00000558155 TM9SF4Q92544 642 aa5.09□□□□□ -1.59
SPG11-208ENST00000558155 CXorf40BQ96DE9 158 aa5.09□□□□□ -1.59
SPG11-208ENST00000558155 SLC41A2Q96JW4 573 aa5.09□□□□□ -1.59
SPG11-208ENST00000558155 ZNF514Q96K75 400 aaPredicted RBP5.09□□□□□ -1.59
SPG11-208ENST00000558155 FER1L6-AS2Q96M78 137 aa5.09□□□□□ -1.59
SPG11-208ENST00000558155 PCMTD1Q96MG8 357 aaPredicted RBP5.09□□□□□ -1.59
SPG11-208ENST00000558155 LRFN5Q96NI6 719 aa5.09□□□□□ -1.59
SPG11-208ENST00000558155 IP6K3Q96PC2 410 aa5.09□□□□□ -1.59
SPG11-208ENST00000558155 RANBP9Q96S59 729 aa5.09□□□□□ -1.59
SPG11-208ENST00000558155 RUFY1Q96T51 708 aa5.09□□□□□ -1.59
SPG11-208ENST00000558155 MGME1Q9BQP7 344 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms