RNA–Protein interactions for RNA: ENST00000557916.5

SMAD6-202, Transcript of SMAD family member 6, humanhuman

TSL 1 (best)

Gene SMAD6, Length 1,401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-202ENST00000557916 DCDC2BA2VCK2 349 aa25.22■■□□□ 1.63
SMAD6-202ENST00000557916 SIGLEC6O43699 453 aa25.22■■□□□ 1.63
SMAD6-202ENST00000557916 ARL4CP56559 192 aa25.22■■□□□ 1.63
SMAD6-202ENST00000557916 LRP8Q14114 963 aa25.22■■□□□ 1.63
SMAD6-202ENST00000557916 PUM1Q14671 1186 aaKnown RBP eCLIP25.22■■□□□ 1.63
SMAD6-202ENST00000557916 FASTKD1Q53R41 847 aaKnown RBP25.22■■□□□ 1.63
SMAD6-202ENST00000557916 LVRNQ6Q4G3 990 aa25.22■■□□□ 1.63
SMAD6-202ENST00000557916 CRTC3Q6UUV7 619 aa25.22■■□□□ 1.63
SMAD6-202ENST00000557916 LRRTM4Q86VH4 590 aa25.22■■□□□ 1.63
SMAD6-202ENST00000557916 NRROSQ86YC3 692 aa25.22■■□□□ 1.63
SMAD6-202ENST00000557916 BAHD1Q8TBE0 780 aaPredicted RBP25.22■■□□□ 1.63
SMAD6-202ENST00000557916 HEXDCQ8WVB3 486 aa25.22■■□□□ 1.63
SMAD6-202ENST00000557916 ZNF669Q96BR6 464 aaPredicted RBP25.22■■□□□ 1.63
SMAD6-202ENST00000557916 STAMBPL1Q96FJ0 436 aa25.22■■□□□ 1.63
SMAD6-202ENST00000557916 TRIM56Q9BRZ2 755 aaKnown RBP25.22■■□□□ 1.63
SMAD6-202ENST00000557916 GRHL1Q9NZI5 618 aa25.22■■□□□ 1.63
SMAD6-202ENST00000557916 ST14Q9Y5Y6 855 aa25.22■■□□□ 1.63
SMAD6-202ENST00000557916 RPS6KL1Q9Y6S9 549 aa25.22■■□□□ 1.63
SMAD6-202ENST00000557916 CFAP99D6REC4 459 aa25.21■■□□□ 1.63
SMAD6-202ENST00000557916 BANF1O75531 89 aa25.21■■□□□ 1.63
SMAD6-202ENST00000557916 VAPBO95292 243 aa25.21■■□□□ 1.63
SMAD6-202ENST00000557916 RALBP11234 206 aa25.21■■□□□ 1.63
SMAD6-202ENST00000557916 AK4P27144 223 aaPredicted RBP25.21■■□□□ 1.63
SMAD6-202ENST00000557916 HIF1AQ16665 826 aa25.21■■□□□ 1.63
SMAD6-202ENST00000557916 ANKRD20A4Q4UJ75 823 aa25.21■■□□□ 1.63
SMAD6-202ENST00000557916 TMEM135Q86UB9 458 aa25.21■■□□□ 1.63
SMAD6-202ENST00000557916 TRAPPC5Q8IUR0 188 aa25.21■■□□□ 1.63
SMAD6-202ENST00000557916 CDC6Q99741 560 aa25.21■■□□□ 1.63
SMAD6-202ENST00000557916 CATSPERZQ9NTU4 200 aa25.21■■□□□ 1.63
SMAD6-202ENST00000557916 FTSJ1Q9UET6 329 aa25.21■■□□□ 1.63
SMAD6-202ENST00000557916 PLXNB3Q9ULL4 1909 aa25.21■■□□□ 1.63
SMAD6-202ENST00000557916 KMOO15229 486 aa25.2■■□□□ 1.63
SMAD6-202ENST00000557916 LDOC1O95751 146 aaPredicted RBP25.2■■□□□ 1.63
SMAD6-202ENST00000557916 PAMP19021 973 aa25.2■■□□□ 1.63
SMAD6-202ENST00000557916 ID4P47928 161 aa25.2■■□□□ 1.63
SMAD6-202ENST00000557916 NOVA1P51513 510 aaKnown RBP25.2■■□□□ 1.63
SMAD6-202ENST00000557916 CTSCP53634 463 aa25.2■■□□□ 1.63
SMAD6-202ENST00000557916 B4GALNT1Q00973 533 aa25.2■■□□□ 1.63
SMAD6-202ENST00000557916 DBN1Q16643 649 aa25.2■■□□□ 1.63
SMAD6-202ENST00000557916 KIAA0930Q6ICG6 404 aaPredicted RBP25.2■■□□□ 1.63
SMAD6-202ENST00000557916 SLC30A9Q6PML9 568 aa25.2■■□□□ 1.63
SMAD6-202ENST00000557916 TMEM220Q6QAJ8 160 aa25.2■■□□□ 1.63
SMAD6-202ENST00000557916 DET1Q7L5Y6 550 aa25.2■■□□□ 1.63
SMAD6-202ENST00000557916 ZNF547Q8IVP9 402 aa25.2■■□□□ 1.63
SMAD6-202ENST00000557916 FAM46DQ8NEK8 389 aa25.2■■□□□ 1.63
SMAD6-202ENST00000557916 SGF29Q96ES7 293 aa25.2■■□□□ 1.63
SMAD6-202ENST00000557916 CCDC97Q96F63 343 aaPredicted RBP25.2■■□□□ 1.63
SMAD6-202ENST00000557916 CNDP2Q96KP4 475 aaKnown RBP25.2■■□□□ 1.63
SMAD6-202ENST00000557916 FCRL3Q96P31 734 aaPredicted RBP25.2■■□□□ 1.63
SMAD6-202ENST00000557916 TTC1Q99614 292 aa25.2■■□□□ 1.63
SMAD6-202ENST00000557916 EBNA1BP2Q99848 306 aaKnown RBP25.2■■□□□ 1.63
SMAD6-202ENST00000557916 IGLV3-16A0A075B6K0 115 aa25.2■■□□□ 1.62
SMAD6-202ENST00000557916 OR2AG2A6NM03 316 aa25.2■■□□□ 1.62
SMAD6-202ENST00000557916 ACP5P13686 325 aa25.2■■□□□ 1.62
SMAD6-202ENST00000557916 CEACAM1P13688 526 aa25.2■■□□□ 1.62
SMAD6-202ENST00000557916 PGAM1P18669 254 aa25.2■■□□□ 1.62
SMAD6-202ENST00000557916 ARNTP27540 789 aa25.2■■□□□ 1.62
SMAD6-202ENST00000557916 ACTR1BP42025 376 aa25.2■■□□□ 1.62
SMAD6-202ENST00000557916 DRG2P55039 364 aaKnown RBP25.2■■□□□ 1.62
SMAD6-202ENST00000557916 ACTR1AP61163 376 aa25.2■■□□□ 1.62
SMAD6-202ENST00000557916 TRIP6Q15654 476 aaKnown RBP25.2■■□□□ 1.62
SMAD6-202ENST00000557916 C6orf132Q5T0Z8 1188 aa25.2■■□□□ 1.62
SMAD6-202ENST00000557916 LYPLAL1Q5VWZ2 237 aa25.2■■□□□ 1.62
SMAD6-202ENST00000557916 ZCCHC8Q6NZY4 707 aaKnown RBP25.2■■□□□ 1.62
SMAD6-202ENST00000557916 PNPLA1Q8N8W4 532 aa25.2■■□□□ 1.62
SMAD6-202ENST00000557916 ZNF514Q96K75 400 aaPredicted RBP25.2■■□□□ 1.62
SMAD6-202ENST00000557916 BOCQ9BWV1 1114 aa25.2■■□□□ 1.62
SMAD6-202ENST00000557916 GPR34Q9UPC5 381 aa25.2■■□□□ 1.62
SMAD6-202ENST00000557916 CD3EAPO15446 510 aaKnown RBP25.19■■□□□ 1.62
SMAD6-202ENST00000557916 USP1O94782 785 aa25.19■■□□□ 1.62
SMAD6-202ENST00000557916 KCNK5O95279 499 aa25.19■■□□□ 1.62
SMAD6-202ENST00000557916 POLBP06746 335 aa25.19■■□□□ 1.62
SMAD6-202ENST00000557916 CAV1Q03135 178 aa25.19■■□□□ 1.62
SMAD6-202ENST00000557916 TRADDQ15628 312 aa25.19■■□□□ 1.62
SMAD6-202ENST00000557916 INSCQ1MX18 579 aa25.19■■□□□ 1.62
SMAD6-202ENST00000557916 PLA2G4EQ3MJ16 856 aa25.19■■□□□ 1.62
SMAD6-202ENST00000557916 GLE1Q53GS7 698 aaKnown RBP25.19■■□□□ 1.62
SMAD6-202ENST00000557916 CERS6Q6ZMG9 384 aa25.19■■□□□ 1.62
SMAD6-202ENST00000557916 NAT14Q8WUY8 206 aa25.19■■□□□ 1.62
SMAD6-202ENST00000557916 APOLD1Q96LR9 279 aa25.19■■□□□ 1.62
SMAD6-202ENST00000557916 NAT9Q9BTE0 207 aa25.19■■□□□ 1.62
SMAD6-202ENST00000557916 SPATS2LQ9NUQ6 558 aaKnown RBP25.19■■□□□ 1.62
SMAD6-202ENST00000557916 TAAR2Q9P1P5 351 aa25.19■■□□□ 1.62
SMAD6-202ENST00000557916 KCNK6Q9Y257 313 aa25.19■■□□□ 1.62
SMAD6-202ENST00000557916 ARID1BQ8NFD5 2236 aaPredicted RBP25.18■■□□□ 1.62
SMAD6-202ENST00000557916 SPTBN4Q9H254 2564 aa25.18■■□□□ 1.62
SMAD6-202ENST00000557916 ZCWPW2A0A1B0GU75 182 aa25.18■■□□□ 1.62
SMAD6-202ENST00000557916 ESYT3A0FGR9 886 aa25.18■■□□□ 1.62
SMAD6-202ENST00000557916 ATP1B2P14415 290 aaPredicted RBP25.18■■□□□ 1.62
SMAD6-202ENST00000557916 ZNF7P17097 686 aaPredicted RBP25.18■■□□□ 1.62
SMAD6-202ENST00000557916 ELK3P41970 407 aa25.18■■□□□ 1.62
SMAD6-202ENST00000557916 ARCN1P48444 511 aaKnown RBP25.18■■□□□ 1.62
SMAD6-202ENST00000557916 PLTPP55058 493 aa25.18■■□□□ 1.62
SMAD6-202ENST00000557916 GUCY2DQ02846 1103 aa25.18■■□□□ 1.62
SMAD6-202ENST00000557916 SEMA3AQ14563 771 aa25.18■■□□□ 1.62
SMAD6-202ENST00000557916 ITIH4Q14624 930 aa25.18■■□□□ 1.62
SMAD6-202ENST00000557916 PROX2Q3B8N5 592 aa25.18■■□□□ 1.62
SMAD6-202ENST00000557916 AARS2Q5JTZ9 985 aaKnown RBP25.18■■□□□ 1.62
SMAD6-202ENST00000557916 HP1BP3Q5SSJ5 553 aaPredicted RBP25.18■■□□□ 1.62
SMAD6-202ENST00000557916 IGDCC3Q8IVU1 814 aa25.18■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms