RNA–Protein interactions for RNA: ENST00000557749.5

LINC00648-204, long intergenic non-protein coding RNA 648, humanhuman

TSL 5 BASIC

Gene LINC00648, Length 443 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-204ENST00000557749 TMPRSS3P57727 454 aa11.29□□□□□ -0.6
LINC00648-204ENST00000557749 EIF3EP60228 445 aaKnown RBP11.29□□□□□ -0.6
LINC00648-204ENST00000557749 CCL7P80098 99 aa11.29□□□□□ -0.6
LINC00648-204ENST00000557749 SQSTM1Q13501 440 aa11.29□□□□□ -0.6
LINC00648-204ENST00000557749 TCEA2Q15560 299 aa11.29□□□□□ -0.6
LINC00648-204ENST00000557749 SWI5Q1ZZU3 235 aa11.29□□□□□ -0.6
LINC00648-204ENST00000557749 RAB11FIP2Q7L804 512 aa11.29□□□□□ -0.6
LINC00648-204ENST00000557749 GLT6D1Q7Z4J2 308 aa11.29□□□□□ -0.6
LINC00648-204ENST00000557749 CLEC14AQ86T13 490 aa11.29□□□□□ -0.6
LINC00648-204ENST00000557749 SLC9B2Q86UD5 537 aa11.29□□□□□ -0.6
LINC00648-204ENST00000557749 NRROSQ86YC3 692 aa11.29□□□□□ -0.6
LINC00648-204ENST00000557749 ZNF567Q8N184 647 aa11.29□□□□□ -0.6
LINC00648-204ENST00000557749 PELI3Q8N2H9 469 aa11.29□□□□□ -0.6
LINC00648-204ENST00000557749 FBXO39Q8N4B4 442 aa11.29□□□□□ -0.6
LINC00648-204ENST00000557749 OR10G6Q8NH81 332 aa11.29□□□□□ -0.6
LINC00648-204ENST00000557749 KCNE4Q8WWG9 221 aa11.29□□□□□ -0.6
LINC00648-204ENST00000557749 KRT35Q92764 455 aa11.29□□□□□ -0.6
LINC00648-204ENST00000557749 AHCYL2Q96HN2 611 aaKnown RBP11.29□□□□□ -0.6
LINC00648-204ENST00000557749 SLC46A1Q96NT5 459 aa11.29□□□□□ -0.6
LINC00648-204ENST00000557749 SLC38A3Q99624 504 aa11.29□□□□□ -0.6
LINC00648-204ENST00000557749 TIMM29Q9BSF4 260 aa11.29□□□□□ -0.6
LINC00648-204ENST00000557749 FRMD8P1Q9BZ68 369 aaPredicted RBP11.29□□□□□ -0.6
LINC00648-204ENST00000557749 GOLPH3Q9H4A6 298 aa11.29□□□□□ -0.6
LINC00648-204ENST00000557749 RUBCNLQ9H714 662 aa11.29□□□□□ -0.6
LINC00648-204ENST00000557749 SUDS3Q9H7L9 328 aaPredicted RBP11.29□□□□□ -0.6
LINC00648-204ENST00000557749 EPB41L5Q9HCM4 733 aa11.29□□□□□ -0.6
LINC00648-204ENST00000557749 SPATS2LQ9NUQ6 558 aaKnown RBP11.29□□□□□ -0.6
LINC00648-204ENST00000557749 SAE1Q9UBE0 346 aaPredicted RBP11.29□□□□□ -0.6
LINC00648-204ENST00000557749 SHOC2Q9UQ13 582 aa11.29□□□□□ -0.6
LINC00648-204ENST00000557749 ARHGEF17Q96PE2 2063 aaPredicted RBP11.28□□□□□ -0.6
LINC00648-204ENST00000557749 FREM2Q5SZK8 3169 aa11.28□□□□□ -0.6
LINC00648-204ENST00000557749 SERTM1A2A2V5 107 aa11.28□□□□□ -0.6
LINC00648-204ENST00000557749 KMOO15229 486 aa11.28□□□□□ -0.6
LINC00648-204ENST00000557749 DUX1O43812 170 aa11.28□□□□□ -0.6
LINC00648-204ENST00000557749 DNAJC6O75061 913 aa11.28□□□□□ -0.6
LINC00648-204ENST00000557749 ECEL1O95672 775 aa11.28□□□□□ -0.6
LINC00648-204ENST00000557749 CRTAMO95727 393 aa11.28□□□□□ -0.6
LINC00648-204ENST00000557749 SLC4A1P02730 911 aa11.28□□□□□ -0.6
LINC00648-204ENST00000557749 RBP3P10745 1247 aa11.28□□□□□ -0.6
LINC00648-204ENST00000557749 PYGMP11217 842 aa11.28□□□□□ -0.6
LINC00648-204ENST00000557749 SPAM1P38567 509 aa11.28□□□□□ -0.6
LINC00648-204ENST00000557749 POLD2P49005 469 aa11.28□□□□□ -0.6
LINC00648-204ENST00000557749 OTUD4Q01804 1114 aaKnown RBP11.28□□□□□ -0.6
LINC00648-204ENST00000557749 IHHQ14623 411 aa11.28□□□□□ -0.6
LINC00648-204ENST00000557749 SLC1A5Q15758 541 aa11.28□□□□□ -0.6
LINC00648-204ENST00000557749 COL28A1Q2UY09 1125 aa11.28□□□□□ -0.6
LINC00648-204ENST00000557749 P3H1Q32P28 736 aa11.28□□□□□ -0.6
LINC00648-204ENST00000557749 LDLRAP1Q5SW96 308 aa11.28□□□□□ -0.6
LINC00648-204ENST00000557749 DARS2Q6PI48 645 aaKnown RBP11.28□□□□□ -0.6
LINC00648-204ENST00000557749 RAD9BQ6WBX8 426 aa11.28□□□□□ -0.6
LINC00648-204ENST00000557749 RIPOR1Q6ZS17 1223 aa11.28□□□□□ -0.6
LINC00648-204ENST00000557749 MARK2Q7KZI7 788 aaKnown RBP11.28□□□□□ -0.6
LINC00648-204ENST00000557749 KDELC2Q7Z4H8 507 aa11.28□□□□□ -0.6
LINC00648-204ENST00000557749 PDZD3Q86UT5 571 aa11.28□□□□□ -0.6
LINC00648-204ENST00000557749 LRRTM4Q86VH4 590 aa11.28□□□□□ -0.6
LINC00648-204ENST00000557749 RBM12BQ8IXT5 1001 aaKnown RBP11.28□□□□□ -0.6
LINC00648-204ENST00000557749 SFRP1Q8N474 314 aa11.28□□□□□ -0.6
LINC00648-204ENST00000557749 Q8N9G6 341 aaPredicted RBP11.28□□□□□ -0.6
LINC00648-204ENST00000557749 LRRC57Q8N9N7 239 aa11.28□□□□□ -0.6
LINC00648-204ENST00000557749 IPMKQ8NFU5 416 aa11.28□□□□□ -0.6
LINC00648-204ENST00000557749 SPATA22Q8NHS9 363 aa11.28□□□□□ -0.6
LINC00648-204ENST00000557749 CCL4L1Q8NHW4 92 aa11.28□□□□□ -0.6
LINC00648-204ENST00000557749 ACTL9Q8TC94 416 aa11.28□□□□□ -0.6
LINC00648-204ENST00000557749 HNRNPLLQ8WVV9 542 aaKnown RBP11.28□□□□□ -0.6
LINC00648-204ENST00000557749 ZNF514Q96K75 400 aaPredicted RBP11.28□□□□□ -0.6
LINC00648-204ENST00000557749 HEMGNQ9BXL5 484 aa11.28□□□□□ -0.6
LINC00648-204ENST00000557749 SARS2Q9NP81 518 aaKnown RBP11.28□□□□□ -0.6
LINC00648-204ENST00000557749 ASCL3Q9NQ33 180 aa11.28□□□□□ -0.6
LINC00648-204ENST00000557749 KCNK4Q9NYG8 393 aa11.28□□□□□ -0.6
LINC00648-204ENST00000557749 ACSL6Q9UKU0 697 aa11.28□□□□□ -0.6
LINC00648-204ENST00000557749 TMEM98Q9Y2Y6 226 aa11.28□□□□□ -0.6
LINC00648-204ENST00000557749 TEX51A0A1B0GUA7 166 aa11.27□□□□□ -0.61
LINC00648-204ENST00000557749 A0A1W2PQM1 296 aa11.27□□□□□ -0.61
LINC00648-204ENST00000557749 GRID2IPA4D2P6 1211 aa11.27□□□□□ -0.61
LINC00648-204ENST00000557749 C5orf60A6NFR6 353 aa11.27□□□□□ -0.61
LINC00648-204ENST00000557749 EIF4E1BA6NMX2 242 aaKnown RBP11.27□□□□□ -0.61
LINC00648-204ENST00000557749 FADS2P1A8MWK0 482 aa11.27□□□□□ -0.61
LINC00648-204ENST00000557749 CDRT15L2A8MXV6 281 aa11.27□□□□□ -0.61
LINC00648-204ENST00000557749 NVLO15381 856 aaKnown RBP11.27□□□□□ -0.61
LINC00648-204ENST00000557749 ARHGAP6O43182 974 aa11.27□□□□□ -0.61
LINC00648-204ENST00000557749 PSMD3O43242 534 aa11.27□□□□□ -0.61
LINC00648-204ENST00000557749 TLX3O43711 291 aaPredicted RBP11.27□□□□□ -0.61
LINC00648-204ENST00000557749 PRMT3O60678 531 aa11.27□□□□□ -0.61
LINC00648-204ENST00000557749 TNFSF15O95150 251 aa11.27□□□□□ -0.61
LINC00648-204ENST00000557749 F3P13726 295 aa11.27□□□□□ -0.61
LINC00648-204ENST00000557749 BPIP17213 487 aa11.27□□□□□ -0.61
LINC00648-204ENST00000557749 AK4P27144 223 aaPredicted RBP11.27□□□□□ -0.61
LINC00648-204ENST00000557749 ALDH4A1P30038 563 aa11.27□□□□□ -0.61
LINC00648-204ENST00000557749 CD68P34810 354 aaPredicted RBP11.27□□□□□ -0.61
LINC00648-204ENST00000557749 HADHAP40939 763 aa11.27□□□□□ -0.61
LINC00648-204ENST00000557749 MARCKSL1P49006 195 aa11.27□□□□□ -0.61
LINC00648-204ENST00000557749 PPM1FP49593 454 aaPredicted RBP11.27□□□□□ -0.61
LINC00648-204ENST00000557749 MAZP56270 477 aaKnown RBP11.27□□□□□ -0.61
LINC00648-204ENST00000557749 B4GALNT1Q00973 533 aa11.27□□□□□ -0.61
LINC00648-204ENST00000557749 HHEXQ03014 270 aa11.27□□□□□ -0.61
LINC00648-204ENST00000557749 ZFP36L1Q07352 338 aaKnown RBP11.27□□□□□ -0.61
LINC00648-204ENST00000557749 PTPRRQ15256 657 aa11.27□□□□□ -0.61
LINC00648-204ENST00000557749 INSCQ1MX18 579 aa11.27□□□□□ -0.61
LINC00648-204ENST00000557749 SIRPB2Q5JXA9 342 aa11.27□□□□□ -0.61
LINC00648-204ENST00000557749 PHF19Q5T6S3 580 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms