RNA–Protein interactions for RNA: ENST00000557673.5

NEK9-211, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-211ENST00000557673 CREG2Q8IUH2 290 aa16.48■□□□□ 0.23
NEK9-211ENST00000557673 KLHDC8BQ8IXV7 354 aa16.48■□□□□ 0.23
NEK9-211ENST00000557673 LPCAT1Q8NF37 534 aa16.48■□□□□ 0.23
NEK9-211ENST00000557673 CCL4L1Q8NHW4 92 aa16.48■□□□□ 0.23
NEK9-211ENST00000557673 CAPZA3Q96KX2 299 aa16.48■□□□□ 0.23
NEK9-211ENST00000557673 MLPHQ9BV36 600 aaPredicted RBP16.48■□□□□ 0.23
NEK9-211ENST00000557673 SPATS2LQ9NUQ6 558 aaKnown RBP16.48■□□□□ 0.23
NEK9-211ENST00000557673 GOLGA6AQ9NYA3 693 aa16.48■□□□□ 0.23
NEK9-211ENST00000557673 UBP1Q9NZI7 540 aa16.48■□□□□ 0.23
NEK9-211ENST00000557673 CD84Q9UIB8 345 aa16.48■□□□□ 0.23
NEK9-211ENST00000557673 RPL26L1Q9UNX3 145 aaKnown RBP16.48■□□□□ 0.23
NEK9-211ENST00000557673 PCDHGA3Q9Y5H0 932 aa16.48■□□□□ 0.23
NEK9-211ENST00000557673 GOLGA6L10A0A0M3HER8 536 aa16.47■□□□□ 0.23
NEK9-211ENST00000557673 PHF2O75151 1096 aa16.47■□□□□ 0.23
NEK9-211ENST00000557673 FGF1P05230 155 aa16.47■□□□□ 0.23
NEK9-211ENST00000557673 CCL4P13236 92 aa16.47■□□□□ 0.23
NEK9-211ENST00000557673 CASQ1P31415 396 aa16.47■□□□□ 0.23
NEK9-211ENST00000557673 STIP1P31948 543 aaKnown RBP16.47■□□□□ 0.23
NEK9-211ENST00000557673 WNT3AP56704 352 aa16.47■□□□□ 0.23
NEK9-211ENST00000557673 CYP4F2P78329 520 aa16.47■□□□□ 0.23
NEK9-211ENST00000557673 MPP3Q13368 585 aa16.47■□□□□ 0.23
NEK9-211ENST00000557673 GALNT3Q14435 633 aa16.47■□□□□ 0.23
NEK9-211ENST00000557673 RAET1GQ6H3X3 334 aa16.47■□□□□ 0.23
NEK9-211ENST00000557673 TTC27Q6P3X3 843 aa16.47■□□□□ 0.23
NEK9-211ENST00000557673 TECPR1Q7Z6L1 1165 aa16.47■□□□□ 0.23
NEK9-211ENST00000557673 SFTPA2Q8IWL1 248 aa16.47■□□□□ 0.23
NEK9-211ENST00000557673 NDUFAF2Q8N183 169 aa16.47■□□□□ 0.23
NEK9-211ENST00000557673 IL22RA1Q8N6P7 574 aa16.47■□□□□ 0.23
NEK9-211ENST00000557673 AGBL5Q8NDL9 886 aa16.47■□□□□ 0.23
NEK9-211ENST00000557673 PPP1R2P1Q96PQ5 205 aa16.47■□□□□ 0.23
NEK9-211ENST00000557673 TEX101Q9BY14 249 aa16.47■□□□□ 0.23
NEK9-211ENST00000557673 ASPSCR1Q9BZE9 553 aa16.47■□□□□ 0.23
NEK9-211ENST00000557673 CDH19Q9H159 772 aa16.47■□□□□ 0.23
NEK9-211ENST00000557673 SUDS3Q9H7L9 328 aaPredicted RBP16.47■□□□□ 0.23
NEK9-211ENST00000557673 TAAR2Q9P1P5 351 aa16.47■□□□□ 0.23
NEK9-211ENST00000557673 TUBD1Q9UJT1 453 aa16.47■□□□□ 0.23
NEK9-211ENST00000557673 DRG1Q9Y295 367 aaKnown RBP16.47■□□□□ 0.23
NEK9-211ENST00000557673 PTPN13Q12923 2485 aa16.47■□□□□ 0.23
NEK9-211ENST00000557673 IGHV5-10-1A0A0J9YXX1 117 aa16.46■□□□□ 0.23
NEK9-211ENST00000557673 CAPN5O15484 640 aaPredicted RBP16.46■□□□□ 0.23
NEK9-211ENST00000557673 ANXA9O76027 345 aa16.46■□□□□ 0.23
NEK9-211ENST00000557673 ECEL1O95672 775 aa16.46■□□□□ 0.23
NEK9-211ENST00000557673 NDST3O95803 873 aa16.46■□□□□ 0.23
NEK9-211ENST00000557673 IFNB1P01574 187 aa16.46■□□□□ 0.23
NEK9-211ENST00000557673 WT1P19544 449 aaPredicted RBP16.46■□□□□ 0.23
NEK9-211ENST00000557673 CSTF2P33240 577 aaKnown RBP eCLIP16.46■□□□□ 0.23
NEK9-211ENST00000557673 KCNJ1P48048 391 aa16.46■□□□□ 0.23
NEK9-211ENST00000557673 LIMK2P53671 638 aa16.46■□□□□ 0.23
NEK9-211ENST00000557673 GEMP55040 296 aa16.46■□□□□ 0.23
NEK9-211ENST00000557673 MAZP56270 477 aaKnown RBP16.46■□□□□ 0.23
NEK9-211ENST00000557673 CDK3Q00526 305 aa16.46■□□□□ 0.23
NEK9-211ENST00000557673 CDK18Q07002 472 aa16.46■□□□□ 0.23
NEK9-211ENST00000557673 SQSTM1Q13501 440 aa16.46■□□□□ 0.23
NEK9-211ENST00000557673 CLCA4Q14CN2 919 aa16.46■□□□□ 0.23
NEK9-211ENST00000557673 QPCTQ16769 361 aa16.46■□□□□ 0.23
NEK9-211ENST00000557673 CCDC89Q8N998 374 aa16.46■□□□□ 0.23
NEK9-211ENST00000557673 GLIS1Q8NBF1 620 aa16.46■□□□□ 0.23
NEK9-211ENST00000557673 RCBTB1Q8NDN9 531 aa16.46■□□□□ 0.23
NEK9-211ENST00000557673 IPMKQ8NFU5 416 aa16.46■□□□□ 0.23
NEK9-211ENST00000557673 OR4D9Q8NGE8 314 aa16.46■□□□□ 0.23
NEK9-211ENST00000557673 NKD1Q969G9 470 aa16.46■□□□□ 0.23
NEK9-211ENST00000557673 MRGPRX2Q96LB1 330 aa16.46■□□□□ 0.23
NEK9-211ENST00000557673 CCDC74BQ96LY2 380 aa16.46■□□□□ 0.23
NEK9-211ENST00000557673 CATSPER2Q96P56 530 aa16.46■□□□□ 0.23
NEK9-211ENST00000557673 NUDT22Q9BRQ3 303 aa16.46■□□□□ 0.23
NEK9-211ENST00000557673 DDA1Q9BW61 102 aa16.46■□□□□ 0.23
NEK9-211ENST00000557673 SLC12A9Q9BXP2 914 aa16.46■□□□□ 0.23
NEK9-211ENST00000557673 ADGRE3Q9BY15 652 aa16.46■□□□□ 0.23
NEK9-211ENST00000557673 ABCG8Q9H221 673 aa16.46■□□□□ 0.23
NEK9-211ENST00000557673 METTL18O95568 372 aa16.45■□□□□ 0.22
NEK9-211ENST00000557673 FGF3P11487 239 aaPredicted RBP16.45■□□□□ 0.22
NEK9-211ENST00000557673 CD1CP29017 333 aa16.45■□□□□ 0.22
NEK9-211ENST00000557673 GNPDA1P46926 289 aa16.45■□□□□ 0.22
NEK9-211ENST00000557673 FNTAP49354 379 aa16.45■□□□□ 0.22
NEK9-211ENST00000557673 STC1P52823 247 aa16.45■□□□□ 0.22
NEK9-211ENST00000557673 PTSQ03393 145 aa16.45■□□□□ 0.22
NEK9-211ENST00000557673 TLE1Q04724 770 aa16.45■□□□□ 0.22
NEK9-211ENST00000557673 PRPSAP1Q14558 356 aa16.45■□□□□ 0.22
NEK9-211ENST00000557673 PARP6Q2NL67 630 aa16.45■□□□□ 0.22
NEK9-211ENST00000557673 COLEC12Q5KU26 742 aa16.45■□□□□ 0.22
NEK9-211ENST00000557673 PRUNE1Q86TP1 453 aa16.45■□□□□ 0.22
NEK9-211ENST00000557673 NRROSQ86YC3 692 aa16.45■□□□□ 0.22
NEK9-211ENST00000557673 PTCD2Q8WV60 388 aaKnown RBP16.45■□□□□ 0.22
NEK9-211ENST00000557673 JPH3Q8WXH2 748 aaPredicted RBP16.45■□□□□ 0.22
NEK9-211ENST00000557673 SCAMP4Q969E2 229 aa16.45■□□□□ 0.22
NEK9-211ENST00000557673 MAGOHBQ96A72 148 aaKnown RBP16.45■□□□□ 0.22
NEK9-211ENST00000557673 AP2M1Q96CW1 435 aa16.45■□□□□ 0.22
NEK9-211ENST00000557673 LYSMD1Q96S90 227 aa16.45■□□□□ 0.22
NEK9-211ENST00000557673 FSD1LQ9BXM9 530 aa16.45■□□□□ 0.22
NEK9-211ENST00000557673 FRMD8Q9BZ67 464 aaPredicted RBP16.45■□□□□ 0.22
NEK9-211ENST00000557673 PAK5Q9P286 719 aa16.45■□□□□ 0.22
NEK9-211ENST00000557673 LOC285095A0A1B0GVY8 99 aa16.44■□□□□ 0.22
NEK9-211ENST00000557673 CLDN7O95471 211 aa16.44■□□□□ 0.22
NEK9-211ENST00000557673 SOD1P00441 154 aa16.44■□□□□ 0.22
NEK9-211ENST00000557673 FUCA1P04066 466 aa16.44■□□□□ 0.22
NEK9-211ENST00000557673 CEACAM5P06731 702 aa16.44■□□□□ 0.22
NEK9-211ENST00000557673 ETS1P14921 441 aa16.44■□□□□ 0.22
NEK9-211ENST00000557673 ZNF30P17039 623 aa16.44■□□□□ 0.22
NEK9-211ENST00000557673 TEAD1P28347 426 aa16.44■□□□□ 0.22
NEK9-211ENST00000557673 ADRA1AP35348 466 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms