RNA–Protein interactions for RNA: ENST00000557538.5

HIF1A-212, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-212ENST00000557538 QDPRP09417 244 aa1.7□□□□□ -2.14
HIF1A-212ENST00000557538 DAOP14920 347 aa1.7□□□□□ -2.14
HIF1A-212ENST00000557538 IL4RP24394 825 aa1.7□□□□□ -2.14
HIF1A-212ENST00000557538 KRT2P35908 639 aa1.7□□□□□ -2.14
HIF1A-212ENST00000557538 USP8P40818 1118 aa1.7□□□□□ -2.14
HIF1A-212ENST00000557538 SLC15A1P46059 708 aa1.7□□□□□ -2.14
HIF1A-212ENST00000557538 CLCN3P51790 818 aa1.7□□□□□ -2.14
HIF1A-212ENST00000557538 COX10Q12887 443 aa1.7□□□□□ -2.14
HIF1A-212ENST00000557538 RUNX2Q13950 521 aa1.7□□□□□ -2.14
HIF1A-212ENST00000557538 PRTGQ2VWP7 1150 aa1.7□□□□□ -2.14
HIF1A-212ENST00000557538 CBWD6Q4V339 395 aa1.7□□□□□ -2.14
HIF1A-212ENST00000557538 ATP13A5Q4VNC0 1218 aa1.7□□□□□ -2.14
HIF1A-212ENST00000557538 PARP10Q53GL7 1025 aa1.7□□□□□ -2.14
HIF1A-212ENST00000557538 SETMARQ53H47 684 aaPredicted RBP1.7□□□□□ -2.14
HIF1A-212ENST00000557538 KRTCAP3Q53RY4 240 aa1.7□□□□□ -2.14
HIF1A-212ENST00000557538 RILPL1Q5EBL4 403 aa1.7□□□□□ -2.14
HIF1A-212ENST00000557538 CBWD3Q5JTY5 395 aa1.7□□□□□ -2.14
HIF1A-212ENST00000557538 MFSD4BQ5TF39 518 aa1.7□□□□□ -2.14
HIF1A-212ENST00000557538 NUGGCQ68CJ6 796 aa1.7□□□□□ -2.14
HIF1A-212ENST00000557538 C18orf63Q68DL7 685 aa1.7□□□□□ -2.14
HIF1A-212ENST00000557538 KIAA0930Q6ICG6 404 aaPredicted RBP1.7□□□□□ -2.14
HIF1A-212ENST00000557538 LRRC8EQ6NSJ5 796 aa1.7□□□□□ -2.14
HIF1A-212ENST00000557538 IRGCQ6NXR0 463 aa1.7□□□□□ -2.14
HIF1A-212ENST00000557538 TEX11Q8IYF3 940 aa1.7□□□□□ -2.14
HIF1A-212ENST00000557538 TDRD5Q8NAT2 981 aaKnown RBP1.7□□□□□ -2.14
HIF1A-212ENST00000557538 DRAXINQ8NBI3 349 aaPredicted RBP1.7□□□□□ -2.14
HIF1A-212ENST00000557538 XXYLT1Q8NBI6 393 aa1.7□□□□□ -2.14
HIF1A-212ENST00000557538 OR14L1PQ8NHC6 308 aa1.7□□□□□ -2.14
HIF1A-212ENST00000557538 SPATA22Q8NHS9 363 aa1.7□□□□□ -2.14
HIF1A-212ENST00000557538 ZNF75CPQ92670 426 aaPredicted RBP1.7□□□□□ -2.14
HIF1A-212ENST00000557538 ZNF419Q96HQ0 510 aaPredicted RBP1.7□□□□□ -2.14
HIF1A-212ENST00000557538 TSGA13Q96PP4 275 aa1.7□□□□□ -2.14
HIF1A-212ENST00000557538 GPR88Q9GZN0 384 aa1.7□□□□□ -2.14
HIF1A-212ENST00000557538 HRH4Q9H3N8 390 aa1.7□□□□□ -2.14
HIF1A-212ENST00000557538 SUDS3Q9H7L9 328 aaPredicted RBP1.7□□□□□ -2.14
HIF1A-212ENST00000557538 DDX31Q9H8H2 851 aaKnown RBP1.7□□□□□ -2.14
HIF1A-212ENST00000557538 ANKZF1Q9H8Y5 726 aa1.7□□□□□ -2.14
HIF1A-212ENST00000557538 FKRPQ9H9S5 495 aa1.7□□□□□ -2.14
HIF1A-212ENST00000557538 SLC35C2Q9NQQ7 365 aa1.7□□□□□ -2.14
HIF1A-212ENST00000557538 CNGB3Q9NQW8 809 aa1.7□□□□□ -2.14
HIF1A-212ENST00000557538 ACSS1Q9NUB1 689 aaPredicted RBP1.7□□□□□ -2.14
HIF1A-212ENST00000557538 SETD4Q9NVD3 440 aa1.7□□□□□ -2.14
HIF1A-212ENST00000557538 CISD1Q9NZ45 108 aaKnown RBP1.7□□□□□ -2.14
HIF1A-212ENST00000557538 FZD10Q9ULW2 581 aa1.7□□□□□ -2.14
HIF1A-212ENST00000557538 CGNL1Q0VF96 1302 aa1.69□□□□□ -2.14
HIF1A-212ENST00000557538 A0A1W2PS18 150 aa1.69□□□□□ -2.14
HIF1A-212ENST00000557538 TMEM221A6NGB7 291 aa1.69□□□□□ -2.14
HIF1A-212ENST00000557538 B4DLN1 442 aa1.69□□□□□ -2.14
HIF1A-212ENST00000557538 M0QZ24 198 aa1.69□□□□□ -2.14
HIF1A-212ENST00000557538 INSIG1O15503 277 aa1.69□□□□□ -2.14
HIF1A-212ENST00000557538 DKC1O60832 514 aaKnown RBP eCLIP1.69□□□□□ -2.14
HIF1A-212ENST00000557538 KINO60870 393 aaKnown RBP1.69□□□□□ -2.14
HIF1A-212ENST00000557538 SYF2O95926 243 aaKnown RBP1.69□□□□□ -2.14
HIF1A-212ENST00000557538 GH2P01242 217 aa1.69□□□□□ -2.14
HIF1A-212ENST00000557538 LINC00271P0C7V0 271 aa1.69□□□□□ -2.14
HIF1A-212ENST00000557538 TFPIP10646 304 aa1.69□□□□□ -2.14
HIF1A-212ENST00000557538 RPS2P15880 293 aaKnown RBP1.69□□□□□ -2.14
HIF1A-212ENST00000557538 EDN2P20800 178 aa1.69□□□□□ -2.14
HIF1A-212ENST00000557538 HOXC8P31273 242 aa1.69□□□□□ -2.14
HIF1A-212ENST00000557538 ZNF155Q12901 538 aaPredicted RBP1.69□□□□□ -2.14
HIF1A-212ENST00000557538 IKQ13123 557 aaPredicted RBP1.69□□□□□ -2.14
HIF1A-212ENST00000557538 MED22Q15528 200 aa1.69□□□□□ -2.14
HIF1A-212ENST00000557538 PNLIPRP3Q17RR3 467 aa1.69□□□□□ -2.14
HIF1A-212ENST00000557538 LRIF1Q5T3J3 769 aa1.69□□□□□ -2.14
HIF1A-212ENST00000557538 LCE1AQ5T7P2 110 aa1.69□□□□□ -2.14
HIF1A-212ENST00000557538 COLCA1Q6ZS62 124 aa1.69□□□□□ -2.14
HIF1A-212ENST00000557538 PM20D2Q8IYS1 436 aa1.69□□□□□ -2.14
HIF1A-212ENST00000557538 PCDH20Q8N6Y1 951 aaKnown RBP1.69□□□□□ -2.14
HIF1A-212ENST00000557538 RASSF8Q8NHQ8 419 aa1.69□□□□□ -2.14
HIF1A-212ENST00000557538 RHBDF1Q96CC6 855 aa1.69□□□□□ -2.14
HIF1A-212ENST00000557538 NAF1Q96HR8 494 aaKnown RBP1.69□□□□□ -2.14
HIF1A-212ENST00000557538 APOLD1Q96LR9 279 aa1.69□□□□□ -2.14
HIF1A-212ENST00000557538 CFAP53Q96M91 514 aa1.69□□□□□ -2.14
HIF1A-212ENST00000557538 SPAG5Q96R06 1193 aa1.69□□□□□ -2.14
HIF1A-212ENST00000557538 BTBD10Q9BSF8 475 aa1.69□□□□□ -2.14
HIF1A-212ENST00000557538 SLC7A5P2Q9GIP4 190 aa1.69□□□□□ -2.14
HIF1A-212ENST00000557538 TSPY26PQ9H489 355 aa1.69□□□□□ -2.14
HIF1A-212ENST00000557538 UBTD1Q9HAC8 227 aa1.69□□□□□ -2.14
HIF1A-212ENST00000557538 PIH1D3Q9NQM4 214 aaKnown RBP1.69□□□□□ -2.14
HIF1A-212ENST00000557538 ZNF224Q9NZL3 707 aa1.69□□□□□ -2.14
HIF1A-212ENST00000557538 CGNQ9P2M7 1197 aaKnown RBP1.69□□□□□ -2.14
HIF1A-212ENST00000557538 OR14J1Q9UGF5 321 aa1.69□□□□□ -2.14
HIF1A-212ENST00000557538 CHORDC1Q9UHD1 332 aaPredicted RBP1.69□□□□□ -2.14
HIF1A-212ENST00000557538 TBK1Q9UHD2 729 aa1.69□□□□□ -2.14
HIF1A-212ENST00000557538 GTF3C4Q9UKN8 822 aa1.69□□□□□ -2.14
HIF1A-212ENST00000557538 PLAGL1Q9UM63 463 aa1.69□□□□□ -2.14
HIF1A-212ENST00000557538 PAM16Q9Y3D7 125 aa1.69□□□□□ -2.14
HIF1A-212ENST00000557538 ZBED9Q6R2W3 1325 aa1.69□□□□□ -2.14
HIF1A-212ENST00000557538 A0A1B0GUV1 79 aa1.69□□□□□ -2.14
HIF1A-212ENST00000557538 MAGEA13PA6NCF6 341 aa1.69□□□□□ -2.14
HIF1A-212ENST00000557538 MAGEB17A8MXT2 336 aa1.69□□□□□ -2.14
HIF1A-212ENST00000557538 ANKRD66B4E2M5 251 aa1.69□□□□□ -2.14
HIF1A-212ENST00000557538 VCYO14598 125 aa1.69□□□□□ -2.14
HIF1A-212ENST00000557538 TNFRSF13BO14836 293 aaPredicted RBP1.69□□□□□ -2.14
HIF1A-212ENST00000557538 P4HA2O15460 535 aa1.69□□□□□ -2.14
HIF1A-212ENST00000557538 SMAD6O43541 496 aaKnown RBP1.69□□□□□ -2.14
HIF1A-212ENST00000557538 KIF5CO60282 957 aa1.69□□□□□ -2.14
HIF1A-212ENST00000557538 NDUFS7O75251 213 aa1.69□□□□□ -2.14
HIF1A-212ENST00000557538 AVILO75366 819 aa1.69□□□□□ -2.14
HIF1A-212ENST00000557538 E2F6O75461 281 aa1.69□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms