RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 FAM229AH3BQW9 127 aa5.81□□□□□ -1.48
VPS33B-207ENST00000557470 EREGO14944 169 aa5.81□□□□□ -1.48
VPS33B-207ENST00000557470 GPR39O43194 453 aa5.81□□□□□ -1.48
VPS33B-207ENST00000557470 SEMA7AO75326 666 aa5.81□□□□□ -1.48
VPS33B-207ENST00000557470 VPS4BO75351 444 aa5.81□□□□□ -1.48
VPS33B-207ENST00000557470 MAP3K6O95382 1288 aa5.81□□□□□ -1.48
VPS33B-207ENST00000557470 DLGAP3O95886 979 aa5.81□□□□□ -1.48
VPS33B-207ENST00000557470 CYP1A1P04798 512 aaPredicted RBP5.81□□□□□ -1.48
VPS33B-207ENST00000557470 IVLP07476 585 aa5.81□□□□□ -1.48
VPS33B-207ENST00000557470 MMP8P22894 467 aa5.81□□□□□ -1.48
VPS33B-207ENST00000557470 F8A1P23610 371 aa5.81□□□□□ -1.48
VPS33B-207ENST00000557470 RFC1P35251 1148 aaPredicted RBP5.81□□□□□ -1.48
VPS33B-207ENST00000557470 ADCY8P40145 1251 aa5.81□□□□□ -1.48
VPS33B-207ENST00000557470 ADH7P40394 386 aa5.81□□□□□ -1.48
VPS33B-207ENST00000557470 CCNFP41002 786 aa5.81□□□□□ -1.48
VPS33B-207ENST00000557470 ETV3P41162 512 aa5.81□□□□□ -1.48
VPS33B-207ENST00000557470 MTIF2P46199 727 aaKnown RBP5.81□□□□□ -1.48
VPS33B-207ENST00000557470 CSNK1DP48730 415 aa5.81□□□□□ -1.48
VPS33B-207ENST00000557470 COPB1P53618 953 aaKnown RBP5.81□□□□□ -1.48
VPS33B-207ENST00000557470 CDK3Q00526 305 aa5.81□□□□□ -1.48
VPS33B-207ENST00000557470 MC2RQ01718 297 aa5.81□□□□□ -1.48
VPS33B-207ENST00000557470 BCL2L1Q07817 233 aa5.81□□□□□ -1.48
VPS33B-207ENST00000557470 CNGA3Q16281 694 aa5.81□□□□□ -1.48
VPS33B-207ENST00000557470 HIF1AQ16665 826 aa5.81□□□□□ -1.48
VPS33B-207ENST00000557470 MIIPQ5JXC2 388 aa5.81□□□□□ -1.48
VPS33B-207ENST00000557470 FHL5Q5TD97 284 aa5.81□□□□□ -1.48
VPS33B-207ENST00000557470 KLHDC7AQ5VTJ3 777 aa5.81□□□□□ -1.48
VPS33B-207ENST00000557470 DENND2CQ68D51 928 aa5.81□□□□□ -1.48
VPS33B-207ENST00000557470 DOK6Q6PKX4 331 aa5.81□□□□□ -1.48
VPS33B-207ENST00000557470 WDR74Q6RFH5 385 aaPredicted RBP5.81□□□□□ -1.48
VPS33B-207ENST00000557470 CEACAM20Q6UY09 585 aa5.81□□□□□ -1.48
VPS33B-207ENST00000557470 ARHGAP22Q7Z5H3 698 aa5.81□□□□□ -1.48
VPS33B-207ENST00000557470 SLFN11Q7Z7L1 901 aa5.81□□□□□ -1.48
VPS33B-207ENST00000557470 PPHLN1Q8NEY8 458 aaKnown RBP5.81□□□□□ -1.48
VPS33B-207ENST00000557470 OR10G6Q8NH81 332 aa5.81□□□□□ -1.48
VPS33B-207ENST00000557470 SLC37A2Q8TED4 501 aa5.81□□□□□ -1.48
VPS33B-207ENST00000557470 SSC4DQ8WTU2 575 aa5.81□□□□□ -1.48
VPS33B-207ENST00000557470 AHCYL2Q96HN2 611 aaKnown RBP5.81□□□□□ -1.48
VPS33B-207ENST00000557470 OR2M4Q96R27 311 aa5.81□□□□□ -1.48
VPS33B-207ENST00000557470 NAA15Q9BXJ9 866 aaKnown RBP5.81□□□□□ -1.48
VPS33B-207ENST00000557470 TRIT1Q9H3H1 467 aaKnown RBP5.81□□□□□ -1.48
VPS33B-207ENST00000557470 LRRC19Q9H756 370 aa5.81□□□□□ -1.48
VPS33B-207ENST00000557470 CATSPERBQ9H7T0 1116 aa5.81□□□□□ -1.48
VPS33B-207ENST00000557470 PRDM8Q9NQV8 689 aa5.81□□□□□ -1.48
VPS33B-207ENST00000557470 FBXO8Q9NRD0 319 aa5.81□□□□□ -1.48
VPS33B-207ENST00000557470 INTS7Q9NVH2 962 aaKnown RBP5.81□□□□□ -1.48
VPS33B-207ENST00000557470 TMEM63CQ9P1W3 806 aa5.81□□□□□ -1.48
VPS33B-207ENST00000557470 POLG2Q9UHN1 485 aa5.81□□□□□ -1.48
VPS33B-207ENST00000557470 NOCTQ9UK39 431 aaKnown RBP5.81□□□□□ -1.48
VPS33B-207ENST00000557470 VPS4AQ9UN37 437 aa5.81□□□□□ -1.48
VPS33B-207ENST00000557470 SLC17A4Q9Y2C5 497 aa5.81□□□□□ -1.48
VPS33B-207ENST00000557470 TMEM184BQ9Y519 407 aaPredicted RBP5.81□□□□□ -1.48
VPS33B-207ENST00000557470 KCTD3Q9Y597 815 aa5.81□□□□□ -1.48
VPS33B-207ENST00000557470 CSMD1Q96PZ7 3565 aa5.81□□□□□ -1.48
VPS33B-207ENST00000557470 FBN2P35556 2912 aa5.8□□□□□ -1.48
VPS33B-207ENST00000557470 TRBV23OR9-2A0A075B6M9 112 aa5.8□□□□□ -1.48
VPS33B-207ENST00000557470 FGF10O15520 208 aaPredicted RBP5.8□□□□□ -1.48
VPS33B-207ENST00000557470 CCP110O43303 1012 aa5.8□□□□□ -1.48
VPS33B-207ENST00000557470 PALMO75781 387 aa5.8□□□□□ -1.48
VPS33B-207ENST00000557470 HEXIM1O94992 359 aaKnown RBP5.8□□□□□ -1.48
VPS33B-207ENST00000557470 EML2O95834 649 aa5.8□□□□□ -1.48
VPS33B-207ENST00000557470 SOD1P00441 154 aa5.8□□□□□ -1.48
VPS33B-207ENST00000557470 TPM2P07951 284 aa5.8□□□□□ -1.48
VPS33B-207ENST00000557470 KRT3P12035 628 aa5.8□□□□□ -1.48
VPS33B-207ENST00000557470 UCHL3P15374 230 aa5.8□□□□□ -1.48
VPS33B-207ENST00000557470 CHRNB2P17787 502 aa5.8□□□□□ -1.48
VPS33B-207ENST00000557470 TNFAIP3P21580 790 aa5.8□□□□□ -1.48
VPS33B-207ENST00000557470 GPD1P21695 349 aa5.8□□□□□ -1.48
VPS33B-207ENST00000557470 LHCGRP22888 699 aa5.8□□□□□ -1.48
VPS33B-207ENST00000557470 GRNP28799 593 aaKnown RBP5.8□□□□□ -1.48
VPS33B-207ENST00000557470 FASLGP48023 281 aa5.8□□□□□ -1.48
VPS33B-207ENST00000557470 PAPOLAP51003 745 aaKnown RBP5.8□□□□□ -1.48
VPS33B-207ENST00000557470 SCNN1BP51168 640 aa5.8□□□□□ -1.48
VPS33B-207ENST00000557470 PMS2P54278 862 aa5.8□□□□□ -1.48
VPS33B-207ENST00000557470 AP1S1P61966 158 aa5.8□□□□□ -1.48
VPS33B-207ENST00000557470 POLR2LP62875 67 aaKnown RBP5.8□□□□□ -1.48
VPS33B-207ENST00000557470 FMO1Q01740 532 aa5.8□□□□□ -1.48
VPS33B-207ENST00000557470 CDR2Q01850 454 aa5.8□□□□□ -1.48
VPS33B-207ENST00000557470 PTP4A2Q12974 167 aa5.8□□□□□ -1.48
VPS33B-207ENST00000557470 PEX6Q13608 980 aa5.8□□□□□ -1.48
VPS33B-207ENST00000557470 MAP7Q14244 749 aa5.8□□□□□ -1.48
VPS33B-207ENST00000557470 ERV3-1Q14264 604 aa5.8□□□□□ -1.48
VPS33B-207ENST00000557470 PTPRRQ15256 657 aa5.8□□□□□ -1.48
VPS33B-207ENST00000557470 MAN2A1Q16706 1144 aa5.8□□□□□ -1.48
VPS33B-207ENST00000557470 MINDY4Q4G0A6 757 aa5.8□□□□□ -1.48
VPS33B-207ENST00000557470 RAET1GQ6H3X3 334 aa5.8□□□□□ -1.48
VPS33B-207ENST00000557470 MRM1Q6IN84 353 aaKnown RBP5.8□□□□□ -1.48
VPS33B-207ENST00000557470 SCYL2Q6P3W7 929 aa5.8□□□□□ -1.48
VPS33B-207ENST00000557470 WDR59Q6PJI9 974 aa5.8□□□□□ -1.48
VPS33B-207ENST00000557470 ARHGAP36Q6ZRI8 547 aa5.8□□□□□ -1.48
VPS33B-207ENST00000557470 GK5Q6ZS86 529 aa5.8□□□□□ -1.48
VPS33B-207ENST00000557470 LHFPL2Q6ZUX7 228 aa5.8□□□□□ -1.48
VPS33B-207ENST00000557470 Q6ZVL8 140 aa5.8□□□□□ -1.48
VPS33B-207ENST00000557470 HSD11B1LQ7Z5J1 315 aa5.8□□□□□ -1.48
VPS33B-207ENST00000557470 TMEM135Q86UB9 458 aa5.8□□□□□ -1.48
VPS33B-207ENST00000557470 TRIM74Q86UV6 250 aa5.8□□□□□ -1.48
VPS33B-207ENST00000557470 CCDC13Q8IYE1 715 aa5.8□□□□□ -1.48
VPS33B-207ENST00000557470 CBARPQ8N350 705 aaPredicted RBP5.8□□□□□ -1.48
VPS33B-207ENST00000557470 SFRP1Q8N474 314 aa5.8□□□□□ -1.48
VPS33B-207ENST00000557470 ESX1Q8N693 406 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms