RNA–Protein interactions for RNA: ENST00000557439.5

XRCC3-218, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 5

Gene XRCC3, Length 2,599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-218ENST00000557439 LPCAT2Q7L5N7 544 aa17.54■□□□□ 0.4
XRCC3-218ENST00000557439 SAPCD2Q86UD0 394 aa17.54■□□□□ 0.4
XRCC3-218ENST00000557439 OR6K2Q8NGY2 324 aa17.54■□□□□ 0.4
XRCC3-218ENST00000557439 B4GALNT2Q8NHY0 566 aa17.54■□□□□ 0.4
XRCC3-218ENST00000557439 MYRFLQ96LU7 910 aa17.54■□□□□ 0.4
XRCC3-218ENST00000557439 PPM1MQ96MI6 270 aa17.54■□□□□ 0.4
XRCC3-218ENST00000557439 RPF2Q9H7B2 306 aaKnown RBP17.54■□□□□ 0.4
XRCC3-218ENST00000557439 TRMT6Q9UJA5 497 aaKnown RBP17.54■□□□□ 0.4
XRCC3-218ENST00000557439 CCDC154A6NI56 674 aa17.54■□□□□ 0.4
XRCC3-218ENST00000557439 TMEM88BA6NKF7 163 aa17.54■□□□□ 0.4
XRCC3-218ENST00000557439 SLC38A8A6NNN8 435 aa17.54■□□□□ 0.4
XRCC3-218ENST00000557439 ACOX3O15254 700 aa17.54■□□□□ 0.4
XRCC3-218ENST00000557439 SYNCRIPO60506 623 aaKnown RBP17.54■□□□□ 0.4
XRCC3-218ENST00000557439 SNX2O60749 519 aa17.54■□□□□ 0.4
XRCC3-218ENST00000557439 SLC22A3O75751 556 aa17.54■□□□□ 0.4
XRCC3-218ENST00000557439 CNPP09543 421 aaKnown RBP17.54■□□□□ 0.4
XRCC3-218ENST00000557439 CDK4P11802 303 aa17.54■□□□□ 0.4
XRCC3-218ENST00000557439 CTPS1P17812 591 aa17.54■□□□□ 0.4
XRCC3-218ENST00000557439 CCT8P50990 548 aa17.54■□□□□ 0.4
XRCC3-218ENST00000557439 DGKQP52824 942 aa17.54■□□□□ 0.4
XRCC3-218ENST00000557439 TRAF2Q12933 501 aa17.54■□□□□ 0.4
XRCC3-218ENST00000557439 NANOGP8Q6NSW7 305 aa17.54■□□□□ 0.4
XRCC3-218ENST00000557439 TBPL2Q6SJ96 375 aa17.54■□□□□ 0.4
XRCC3-218ENST00000557439 BCL7CQ8WUZ0 217 aaPredicted RBP17.54■□□□□ 0.4
XRCC3-218ENST00000557439 NANOGQ9H9S0 305 aa17.54■□□□□ 0.4
XRCC3-218ENST00000557439 AQP12BA6NM10 295 aa17.53■□□□□ 0.4
XRCC3-218ENST00000557439 C2orf81A6NN90 581 aa17.53■□□□□ 0.4
XRCC3-218ENST00000557439 E2F3O00716 465 aa17.53■□□□□ 0.4
XRCC3-218ENST00000557439 SYN3O14994 580 aa17.53■□□□□ 0.4
XRCC3-218ENST00000557439 FOXD2O60548 495 aaPredicted RBP17.53■□□□□ 0.4
XRCC3-218ENST00000557439 ESRRBO95718 433 aa17.53■□□□□ 0.4
XRCC3-218ENST00000557439 ALDH3B2P48448 385 aa17.53■□□□□ 0.4
XRCC3-218ENST00000557439 POLR2JP52435 117 aaKnown RBP17.53■□□□□ 0.4
XRCC3-218ENST00000557439 ACLYP53396 1101 aa17.53■□□□□ 0.4
XRCC3-218ENST00000557439 MTPNP58546 118 aa17.53■□□□□ 0.4
XRCC3-218ENST00000557439 RING1Q06587 406 aa17.53■□□□□ 0.4
XRCC3-218ENST00000557439 MERTKQ12866 999 aa17.53■□□□□ 0.4
XRCC3-218ENST00000557439 TAF1AQ15573 450 aaPredicted RBP17.53■□□□□ 0.4
XRCC3-218ENST00000557439 TTC33Q6PID6 262 aaPredicted RBP17.53■□□□□ 0.4
XRCC3-218ENST00000557439 Q6ZSR9 355 aa17.53■□□□□ 0.4
XRCC3-218ENST00000557439 GPSM1Q86YR5 675 aa17.53■□□□□ 0.4
XRCC3-218ENST00000557439 AQP12AQ8IXF9 295 aa17.53■□□□□ 0.4
XRCC3-218ENST00000557439 ABI1Q8IZP0 508 aa17.53■□□□□ 0.4
XRCC3-218ENST00000557439 MAGEE2Q8TD90 523 aaPredicted RBP17.53■□□□□ 0.4
XRCC3-218ENST00000557439 HAUS8Q9BT25 410 aa17.53■□□□□ 0.4
XRCC3-218ENST00000557439 CLK4Q9HAZ1 481 aaKnown RBP17.53■□□□□ 0.4
XRCC3-218ENST00000557439 EBF1Q9UH73 591 aa17.53■□□□□ 0.4
XRCC3-218ENST00000557439 RSL24D1Q9UHA3 163 aaKnown RBP17.53■□□□□ 0.4
XRCC3-218ENST00000557439 MAGED1Q9Y5V3 778 aaPredicted RBP17.53■□□□□ 0.4
XRCC3-218ENST00000557439 TCRBV5S2A0A599 114 aa17.53■□□□□ 0.4
XRCC3-218ENST00000557439 ANKRD33BA6NCL7 494 aa17.53■□□□□ 0.4
XRCC3-218ENST00000557439 RSL1D1O76021 490 aaKnown RBP17.53■□□□□ 0.4
XRCC3-218ENST00000557439 RHOCP08134 193 aa17.53■□□□□ 0.4
XRCC3-218ENST00000557439 PRR35P0CG20 571 aa17.53■□□□□ 0.4
XRCC3-218ENST00000557439 CR2P20023 1033 aa17.53■□□□□ 0.4
XRCC3-218ENST00000557439 PAX3P23760 479 aa17.53■□□□□ 0.4
XRCC3-218ENST00000557439 FCGRTP55899 365 aa17.53■□□□□ 0.4
XRCC3-218ENST00000557439 TWF1Q12792 350 aa17.53■□□□□ 0.4
XRCC3-218ENST00000557439 GPR17Q13304 367 aa17.53■□□□□ 0.4
XRCC3-218ENST00000557439 PLCL1Q15111 1095 aa17.53■□□□□ 0.4
XRCC3-218ENST00000557439 XKR7Q5GH72 579 aa17.53■□□□□ 0.4
XRCC3-218ENST00000557439 C6orf136Q5SQH8 315 aa17.53■□□□□ 0.4
XRCC3-218ENST00000557439 ALG1LQ6GMV1 187 aa17.53■□□□□ 0.4
XRCC3-218ENST00000557439 FUT10Q6P4F1 479 aa17.53■□□□□ 0.4
XRCC3-218ENST00000557439 PROKR1Q8TCW9 393 aa17.53■□□□□ 0.4
XRCC3-218ENST00000557439 EZH1Q92800 747 aaPredicted RBP17.53■□□□□ 0.4
XRCC3-218ENST00000557439 PEX13Q92968 403 aa17.53■□□□□ 0.4
XRCC3-218ENST00000557439 SMPD4Q9NXE4 827 aa17.53■□□□□ 0.4
XRCC3-218ENST00000557439 PADI4Q9UM07 663 aa17.53■□□□□ 0.4
XRCC3-218ENST00000557439 E5RI56 91 aa17.52■□□□□ 0.4
XRCC3-218ENST00000557439 VPS26AO75436 327 aa17.52■□□□□ 0.4
XRCC3-218ENST00000557439 GUCA1CO95843 209 aa17.52■□□□□ 0.4
XRCC3-218ENST00000557439 ALPIP09923 528 aa17.52■□□□□ 0.4
XRCC3-218ENST00000557439 PCNAP12004 261 aa17.52■□□□□ 0.4
XRCC3-218ENST00000557439 LPOP22079 712 aaPredicted RBP17.52■□□□□ 0.4
XRCC3-218ENST00000557439 HRH2P25021 359 aa17.52■□□□□ 0.4
XRCC3-218ENST00000557439 PABPC1LQ4VXU2 614 aaKnown RBP17.52■□□□□ 0.4
XRCC3-218ENST00000557439 ATXN7L2Q5T6C5 722 aaPredicted RBP17.52■□□□□ 0.4
XRCC3-218ENST00000557439 RNF219Q5W0B1 726 aaPredicted RBP17.52■□□□□ 0.4
XRCC3-218ENST00000557439 PRMT9Q6P2P2 845 aa17.52■□□□□ 0.4
XRCC3-218ENST00000557439 GPRIN3Q6ZVF9 776 aa17.52■□□□□ 0.4
XRCC3-218ENST00000557439 CAMK1DQ8IU85 385 aa17.52■□□□□ 0.4
XRCC3-218ENST00000557439 BBS5Q8N3I7 341 aa17.52■□□□□ 0.4
XRCC3-218ENST00000557439 SFRP1Q8N474 314 aa17.52■□□□□ 0.4
XRCC3-218ENST00000557439 EID2BQ96D98 161 aa17.52■□□□□ 0.4
XRCC3-218ENST00000557439 VPS50Q96JG6 964 aa17.52■□□□□ 0.4
XRCC3-218ENST00000557439 MAGEH1Q9H213 219 aa17.52■□□□□ 0.4
XRCC3-218ENST00000557439 ZMYM5Q9UJ78 669 aa17.52■□□□□ 0.4
XRCC3-218ENST00000557439 FAM155AB1AL88 458 aaPredicted RBP17.52■□□□□ 0.39
XRCC3-218ENST00000557439 ANKRD66B4E2M5 251 aa17.52■□□□□ 0.39
XRCC3-218ENST00000557439 STX7O15400 261 aaKnown RBP17.52■□□□□ 0.39
XRCC3-218ENST00000557439 SNAP29O95721 258 aa17.52■□□□□ 0.39
XRCC3-218ENST00000557439 ZDHHC11BP0C7U3 371 aa17.52■□□□□ 0.39
XRCC3-218ENST00000557439 UROSP10746 265 aa17.52■□□□□ 0.39
XRCC3-218ENST00000557439 GGT5P36269 586 aa17.52■□□□□ 0.39
XRCC3-218ENST00000557439 ATP5C1P36542 298 aaKnown RBP17.52■□□□□ 0.39
XRCC3-218ENST00000557439 BNIP2Q12982 314 aa17.52■□□□□ 0.39
XRCC3-218ENST00000557439 TGFBIQ15582 683 aa17.52■□□□□ 0.39
XRCC3-218ENST00000557439 ATP6AP1Q15904 470 aa17.52■□□□□ 0.39
XRCC3-218ENST00000557439 ZIK1Q3SY52 487 aaPredicted RBP17.52■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms