RNA–Protein interactions for RNA: ENST00000557341.5

SNX6-210, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-210ENST00000557341 ZNF7P17097 686 aaPredicted RBP13.96□□□□□ -0.17
SNX6-210ENST00000557341 CD68P34810 354 aaPredicted RBP13.96□□□□□ -0.17
SNX6-210ENST00000557341 MAGEA1P43355 309 aa13.96□□□□□ -0.17
SNX6-210ENST00000557341 WNT3AP56704 352 aa13.96□□□□□ -0.17
SNX6-210ENST00000557341 MC2RQ01718 297 aa13.96□□□□□ -0.17
SNX6-210ENST00000557341 GTF2H3Q13889 308 aa13.96□□□□□ -0.17
SNX6-210ENST00000557341 SEPT7Q16181 437 aaKnown RBP13.96□□□□□ -0.17
SNX6-210ENST00000557341 SIRPB2Q5JXA9 342 aa13.96□□□□□ -0.17
SNX6-210ENST00000557341 ZDHHC20Q5W0Z9 365 aa13.96□□□□□ -0.17
SNX6-210ENST00000557341 C11orf63Q6NUN7 778 aa13.96□□□□□ -0.17
SNX6-210ENST00000557341 SARM1Q6SZW1 724 aa13.96□□□□□ -0.17
SNX6-210ENST00000557341 KDELC1Q6UW63 502 aa13.96□□□□□ -0.17
SNX6-210ENST00000557341 CEACAM20Q6UY09 585 aa13.96□□□□□ -0.17
SNX6-210ENST00000557341 PLXDC1Q8IUK5 500 aa13.96□□□□□ -0.17
SNX6-210ENST00000557341 TRAPPC5Q8IUR0 188 aa13.96□□□□□ -0.17
SNX6-210ENST00000557341 CACNA2D3Q8IZS8 1091 aa13.96□□□□□ -0.17
SNX6-210ENST00000557341 EXD3Q8N9H8 876 aa13.96□□□□□ -0.17
SNX6-210ENST00000557341 TC2NQ8N9U0 490 aa13.96□□□□□ -0.17
SNX6-210ENST00000557341 GDAP1Q8TB36 358 aa13.96□□□□□ -0.17
SNX6-210ENST00000557341 HTR3CQ8WXA8 447 aa13.96□□□□□ -0.17
SNX6-210ENST00000557341 HAUS1Q96CS2 278 aa13.96□□□□□ -0.17
SNX6-210ENST00000557341 RTP4Q96DX8 246 aa13.96□□□□□ -0.17
SNX6-210ENST00000557341 QKIQ96PU8 341 aaKnown RBP eCLIP13.96□□□□□ -0.173e-11■■■■■ 29.6
SNX6-210ENST00000557341 ZPBPQ9BS86 351 aa13.96□□□□□ -0.17
SNX6-210ENST00000557341 ZCCHC2Q9C0B9 1178 aaKnown RBP13.96□□□□□ -0.17
SNX6-210ENST00000557341 BPIFA1Q9NP55 256 aa13.96□□□□□ -0.17
SNX6-210ENST00000557341 LUC7LQ9NQ29 371 aaKnown RBP13.96□□□□□ -0.17
SNX6-210ENST00000557341 POT1Q9NUX5 634 aa13.96□□□□□ -0.17
SNX6-210ENST00000557341 HACD3Q9P035 362 aa13.96□□□□□ -0.17
SNX6-210ENST00000557341 SLC23A2Q9UGH3 650 aa13.96□□□□□ -0.17
SNX6-210ENST00000557341 KLHL3Q9UH77 587 aa13.96□□□□□ -0.17
SNX6-210ENST00000557341 LOC285095A0A1B0GVY8 99 aa13.95□□□□□ -0.18
SNX6-210ENST00000557341 HACD1B0YJ81 288 aa13.95□□□□□ -0.18
SNX6-210ENST00000557341 LCA5LO95447 670 aa13.95□□□□□ -0.18
SNX6-210ENST00000557341 EPOP01588 193 aa13.95□□□□□ -0.18
SNX6-210ENST00000557341 ANKRD34CP0C6C1 535 aa13.95□□□□□ -0.18
SNX6-210ENST00000557341 SFTPCP11686 197 aa13.95□□□□□ -0.18
SNX6-210ENST00000557341 LIFP15018 202 aa13.95□□□□□ -0.18
SNX6-210ENST00000557341 VCLP18206 1134 aa13.95□□□□□ -0.18
SNX6-210ENST00000557341 XRCC1P18887 633 aaPredicted RBP13.95□□□□□ -0.18
SNX6-210ENST00000557341 HLA-DPA1P20036 260 aa13.95□□□□□ -0.18
SNX6-210ENST00000557341 SPAM1P38567 509 aa13.95□□□□□ -0.18
SNX6-210ENST00000557341 MARCKSL1P49006 195 aa13.95□□□□□ -0.18
SNX6-210ENST00000557341 CYP4F2P78329 520 aa13.95□□□□□ -0.18
SNX6-210ENST00000557341 ADCY2Q08462 1091 aa13.95□□□□□ -0.18
SNX6-210ENST00000557341 NFATC3Q12968 1075 aa13.95□□□□□ -0.18
SNX6-210ENST00000557341 NOMO1Q15155 1222 aa13.95□□□□□ -0.18
SNX6-210ENST00000557341 PPP2R5EQ16537 467 aa13.95□□□□□ -0.18
SNX6-210ENST00000557341 ATP13A5Q4VNC0 1218 aa13.95□□□□□ -0.18
SNX6-210ENST00000557341 KHDC1Q4VXA5 237 aaKnown RBP13.95□□□□□ -0.18
SNX6-210ENST00000557341 TMEM26Q6ZUK4 368 aa13.95□□□□□ -0.18
SNX6-210ENST00000557341 PID1Q7Z2X4 250 aa13.95□□□□□ -0.18
SNX6-210ENST00000557341 GLT6D1Q7Z4J2 308 aa13.95□□□□□ -0.18
SNX6-210ENST00000557341 ZNF547Q8IVP9 402 aa13.95□□□□□ -0.18
SNX6-210ENST00000557341 RCOR2Q8IZ40 523 aa13.95□□□□□ -0.18
SNX6-210ENST00000557341 ZNF567Q8N184 647 aa13.95□□□□□ -0.18
SNX6-210ENST00000557341 TTC25Q96NG3 672 aa13.95□□□□□ -0.18
SNX6-210ENST00000557341 FCRL5Q96RD9 977 aa13.95□□□□□ -0.18
SNX6-210ENST00000557341 FSD1LQ9BXM9 530 aa13.95□□□□□ -0.18
SNX6-210ENST00000557341 TRIM5Q9C035 493 aa13.95□□□□□ -0.18
SNX6-210ENST00000557341 FBXO8Q9NRD0 319 aa13.95□□□□□ -0.18
SNX6-210ENST00000557341 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.95□□□□□ -0.18
SNX6-210ENST00000557341 SCHIP1Q9P0W5 487 aaPredicted RBP13.95□□□□□ -0.18
SNX6-210ENST00000557341 SPTA1P02549 2419 aa13.95□□□□□ -0.18
SNX6-210ENST00000557341 PRR19A6NJB7 356 aa13.94□□□□□ -0.18
SNX6-210ENST00000557341 F5H423 210 aaPredicted RBP13.94□□□□□ -0.18
SNX6-210ENST00000557341 SLC28A2O43868 658 aa13.94□□□□□ -0.18
SNX6-210ENST00000557341 UBXN7O94888 489 aa13.94□□□□□ -0.18
SNX6-210ENST00000557341 C9P02748 559 aa13.94□□□□□ -0.18
SNX6-210ENST00000557341 FAM87AP0C7U9 286 aa13.94□□□□□ -0.18
SNX6-210ENST00000557341 IDSP22304 550 aa13.94□□□□□ -0.18
SNX6-210ENST00000557341 RPL10P27635 214 aaKnown RBP13.94□□□□□ -0.18
SNX6-210ENST00000557341 CYLC1P35663 651 aaPredicted RBP13.94□□□□□ -0.18
SNX6-210ENST00000557341 SLC19A1P41440 591 aa13.94□□□□□ -0.18
SNX6-210ENST00000557341 CHRNA4P43681 627 aa13.94□□□□□ -0.18
SNX6-210ENST00000557341 GFERP55789 205 aa13.94□□□□□ -0.18
SNX6-210ENST00000557341 TMEM115Q12893 351 aaPredicted RBP13.94□□□□□ -0.18
SNX6-210ENST00000557341 MPP3Q13368 585 aa13.94□□□□□ -0.18
SNX6-210ENST00000557341 SPA17Q15506 151 aa13.94□□□□□ -0.18
SNX6-210ENST00000557341 SLC1A5Q15758 541 aa13.94□□□□□ -0.18
SNX6-210ENST00000557341 TBR1Q16650 682 aa13.94□□□□□ -0.18
SNX6-210ENST00000557341 ABRAXAS1Q6UWZ7 409 aa13.94□□□□□ -0.18
SNX6-210ENST00000557341 DAAM2Q86T65 1068 aa13.94□□□□□ -0.18
SNX6-210ENST00000557341 CCDC170Q8IYT3 715 aa13.94□□□□□ -0.18
SNX6-210ENST00000557341 NLGN4XQ8N0W4 816 aa13.94□□□□□ -0.18
SNX6-210ENST00000557341 TTC30BQ8N4P2 665 aa13.94□□□□□ -0.18
SNX6-210ENST00000557341 SLC25A41Q8N5S1 370 aa13.94□□□□□ -0.18
SNX6-210ENST00000557341 IPMKQ8NFU5 416 aa13.94□□□□□ -0.18
SNX6-210ENST00000557341 NLGN4YQ8NFZ3 816 aaPredicted RBP13.94□□□□□ -0.18
SNX6-210ENST00000557341 DTX3LQ8TDB6 740 aa13.94□□□□□ -0.18
SNX6-210ENST00000557341 BRSK1Q8TDC3 778 aa13.94□□□□□ -0.18
SNX6-210ENST00000557341 BLOC1S5Q8TDH9 187 aa13.94□□□□□ -0.18
SNX6-210ENST00000557341 KIAA1143Q96AT1 154 aaPredicted RBP13.94□□□□□ -0.18
SNX6-210ENST00000557341 OXNAD1Q96HP4 312 aaPredicted RBP13.94□□□□□ -0.18
SNX6-210ENST00000557341 MRGPRX2Q96LB1 330 aa13.94□□□□□ -0.18
SNX6-210ENST00000557341 CTRCQ99895 268 aa13.94□□□□□ -0.18
SNX6-210ENST00000557341 SLC12A9Q9BXP2 914 aa13.94□□□□□ -0.18
SNX6-210ENST00000557341 FAM117AQ9C073 453 aa13.94□□□□□ -0.18
SNX6-210ENST00000557341 ZNF624Q9P2J8 865 aaPredicted RBP13.94□□□□□ -0.18
SNX6-210ENST00000557341 RSPH14Q9UHP6 348 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms