RNA–Protein interactions for RNA: ENST00000557293.5

PSEN1-221, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-221ENST00000557293 MARC1Q5VT66 337 aa12.32□□□□□ -0.44
PSEN1-221ENST00000557293 IZUMO3Q5VZ72 239 aa12.32□□□□□ -0.44
PSEN1-221ENST00000557293 SP5Q6BEB4 398 aaPredicted RBP12.32□□□□□ -0.44
PSEN1-221ENST00000557293 PLEKHA7Q6IQ23 1121 aa12.32□□□□□ -0.44
PSEN1-221ENST00000557293 ACAD10Q6JQN1 1059 aa12.32□□□□□ -0.44
PSEN1-221ENST00000557293 ADGRG6Q86SQ4 1221 aa12.32□□□□□ -0.44
PSEN1-221ENST00000557293 ZBTB2Q8N680 514 aa12.32□□□□□ -0.44
PSEN1-221ENST00000557293 SIDT2Q8NBJ9 832 aaKnown RBP12.32□□□□□ -0.44
PSEN1-221ENST00000557293 INPP5DQ92835 1189 aa12.32□□□□□ -0.44
PSEN1-221ENST00000557293 MARVELD3Q96A59 401 aa12.32□□□□□ -0.44
PSEN1-221ENST00000557293 ZDHHC12Q96GR4 267 aa12.32□□□□□ -0.44
PSEN1-221ENST00000557293 LYSMD1Q96S90 227 aa12.32□□□□□ -0.44
PSEN1-221ENST00000557293 AGPAT1Q99943 283 aa12.32□□□□□ -0.44
PSEN1-221ENST00000557293 OR2AG1Q9H205 316 aa12.32□□□□□ -0.44
PSEN1-221ENST00000557293 CHST8Q9H2A9 424 aa12.32□□□□□ -0.44
PSEN1-221ENST00000557293 FAM83DQ9H4H8 585 aa12.32□□□□□ -0.44
PSEN1-221ENST00000557293 NT5MQ9NPB1 228 aa12.32□□□□□ -0.44
PSEN1-221ENST00000557293 TAB2Q9NYJ8 693 aa12.32□□□□□ -0.44
PSEN1-221ENST00000557293 MAP10Q9P2G4 905 aa12.32□□□□□ -0.44
PSEN1-221ENST00000557293 ENTPD4Q9Y227 616 aa12.32□□□□□ -0.44
PSEN1-221ENST00000557293 CHKBQ9Y259 395 aa12.32□□□□□ -0.44
PSEN1-221ENST00000557293 OR52A4PA6NMU1 304 aa12.31□□□□□ -0.44
PSEN1-221ENST00000557293 HNRNPRO43390 633 aaKnown RBP12.31□□□□□ -0.44
PSEN1-221ENST00000557293 TMEM63AO94886 807 aa12.31□□□□□ -0.44
PSEN1-221ENST00000557293 EBLN1P0CF75 366 aa12.31□□□□□ -0.44
PSEN1-221ENST00000557293 ZNF7P17097 686 aaPredicted RBP12.31□□□□□ -0.44
PSEN1-221ENST00000557293 IL4RP24394 825 aa12.31□□□□□ -0.44
PSEN1-221ENST00000557293 PSMA2P25787 234 aa12.31□□□□□ -0.44
PSEN1-221ENST00000557293 IL1R2P27930 398 aa12.31□□□□□ -0.44
PSEN1-221ENST00000557293 PLEKHS1Q5SXH7 462 aa12.31□□□□□ -0.44
PSEN1-221ENST00000557293 ALG1LQ6GMV1 187 aa12.31□□□□□ -0.44
PSEN1-221ENST00000557293 IRGCQ6NXR0 463 aa12.31□□□□□ -0.44
PSEN1-221ENST00000557293 WASH2PQ6VEQ5 465 aa12.31□□□□□ -0.44
PSEN1-221ENST00000557293 POLNQ7Z5Q5 900 aa12.31□□□□□ -0.44
PSEN1-221ENST00000557293 BPHLQ86WA6 291 aaPredicted RBP12.31□□□□□ -0.44
PSEN1-221ENST00000557293 PHYKPLQ8IUZ5 450 aa12.31□□□□□ -0.44
PSEN1-221ENST00000557293 PSTKQ8IV42 348 aaKnown RBP12.31□□□□□ -0.44
PSEN1-221ENST00000557293 ZNF547Q8IVP9 402 aa12.31□□□□□ -0.44
PSEN1-221ENST00000557293 NDUFAF2Q8N183 169 aa12.31□□□□□ -0.44
PSEN1-221ENST00000557293 ARRDC2Q8TBH0 407 aa12.31□□□□□ -0.44
PSEN1-221ENST00000557293 UBXN4Q92575 508 aa12.31□□□□□ -0.44
PSEN1-221ENST00000557293 MR1Q95460 341 aa12.31□□□□□ -0.44
PSEN1-221ENST00000557293 ZNF514Q96K75 400 aaPredicted RBP12.31□□□□□ -0.44
PSEN1-221ENST00000557293 MAP3K3Q99759 626 aa12.31□□□□□ -0.44
PSEN1-221ENST00000557293 SYT11Q9BT88 431 aa12.31□□□□□ -0.44
PSEN1-221ENST00000557293 OSGEPL1Q9H4B0 414 aa12.31□□□□□ -0.44
PSEN1-221ENST00000557293 TRIM39Q9HCM9 518 aa12.31□□□□□ -0.44
PSEN1-221ENST00000557293 WASH6PQ9NQA3 447 aa12.31□□□□□ -0.44
PSEN1-221ENST00000557293 FGF21Q9NSA1 209 aa12.31□□□□□ -0.44
PSEN1-221ENST00000557293 ARHGAP10A1A4S6 786 aa12.3□□□□□ -0.44
PSEN1-221ENST00000557293 JCHAINP01591 159 aa12.3□□□□□ -0.44
PSEN1-221ENST00000557293 RAB40ALP0C0E4 278 aa12.3□□□□□ -0.44
PSEN1-221ENST00000557293 TCF4P15884 667 aa12.3□□□□□ -0.44
PSEN1-221ENST00000557293 CA5AP35218 305 aa12.3□□□□□ -0.44
PSEN1-221ENST00000557293 ZNF135P52742 658 aaPredicted RBP12.3□□□□□ -0.44
PSEN1-221ENST00000557293 DSC2Q02487 901 aa12.3□□□□□ -0.44
PSEN1-221ENST00000557293 NIPAL4Q0D2K0 466 aa12.3□□□□□ -0.44
PSEN1-221ENST00000557293 DPCR1Q3MIW9 517 aa12.3□□□□□ -0.44
PSEN1-221ENST00000557293 KHDC1Q4VXA5 237 aaKnown RBP12.3□□□□□ -0.44
PSEN1-221ENST00000557293 PRAMEF17Q5VTA0 474 aa12.3□□□□□ -0.44
PSEN1-221ENST00000557293 AGAP9Q5VTM2 703 aa12.3□□□□□ -0.44
PSEN1-221ENST00000557293 C11orf96Q7Z7L8 435 aa12.3□□□□□ -0.44
PSEN1-221ENST00000557293 IQCKQ8N0W5 287 aa12.3□□□□□ -0.44
PSEN1-221ENST00000557293 D2HGDHQ8N465 521 aa12.3□□□□□ -0.44
PSEN1-221ENST00000557293 ZNF501Q96CX3 271 aaPredicted RBP12.3□□□□□ -0.44
PSEN1-221ENST00000557293 TDRD1Q9BXT4 1180 aaKnown RBP12.3□□□□□ -0.44
PSEN1-221ENST00000557293 POT1Q9NUX5 634 aa12.3□□□□□ -0.44
PSEN1-221ENST00000557293 C5AR2Q9P296 337 aa12.3□□□□□ -0.44
PSEN1-221ENST00000557293 TCFL5Q9UL49 500 aa12.3□□□□□ -0.44
PSEN1-221ENST00000557293 TMPRSS11EQ9UL52 423 aa12.3□□□□□ -0.44
PSEN1-221ENST00000557293 WDR37Q9Y2I8 494 aa12.3□□□□□ -0.44
PSEN1-221ENST00000557293 ATMINO43313 823 aaPredicted RBP12.29□□□□□ -0.44
PSEN1-221ENST00000557293 PRPSAP2O60256 369 aa12.29□□□□□ -0.44
PSEN1-221ENST00000557293 RPL10P27635 214 aaKnown RBP12.29□□□□□ -0.44
PSEN1-221ENST00000557293 VAV2P52735 878 aa12.29□□□□□ -0.44
PSEN1-221ENST00000557293 EPHB1P54762 984 aa12.29□□□□□ -0.44
PSEN1-221ENST00000557293 CDH6P55285 790 aa12.29□□□□□ -0.44
PSEN1-221ENST00000557293 ACY1Q03154 408 aa12.29□□□□□ -0.44
PSEN1-221ENST00000557293 RAPSNQ13702 412 aa12.29□□□□□ -0.44
PSEN1-221ENST00000557293 SEPT7Q16181 437 aaKnown RBP12.29□□□□□ -0.44
PSEN1-221ENST00000557293 DPYSL2Q16555 572 aa12.29□□□□□ -0.44
PSEN1-221ENST00000557293 QPCTQ16769 361 aa12.29□□□□□ -0.44
PSEN1-221ENST00000557293 PLA2G4EQ3MJ16 856 aa12.29□□□□□ -0.44
PSEN1-221ENST00000557293 CRTC3Q6UUV7 619 aa12.29□□□□□ -0.44
PSEN1-221ENST00000557293 TMCO3Q6UWJ1 677 aa12.29□□□□□ -0.44
PSEN1-221ENST00000557293 MED25Q71SY5 747 aa12.29□□□□□ -0.44
PSEN1-221ENST00000557293 TRIM48Q8IWZ4 208 aa12.29□□□□□ -0.44
PSEN1-221ENST00000557293 BBS5Q8N3I7 341 aa12.29□□□□□ -0.44
PSEN1-221ENST00000557293 ENDOVQ8N8Q3 282 aaKnown RBP12.29□□□□□ -0.44
PSEN1-221ENST00000557293 TMEM102Q8N9M5 508 aaPredicted RBP12.29□□□□□ -0.44
PSEN1-221ENST00000557293 GPR26Q8NDV2 337 aa12.29□□□□□ -0.44
PSEN1-221ENST00000557293 LRFN5Q96NI6 719 aa12.29□□□□□ -0.44
PSEN1-221ENST00000557293 CSPG4P5Q96PW8 444 aa12.29□□□□□ -0.44
PSEN1-221ENST00000557293 NLNQ9BYT8 704 aa12.29□□□□□ -0.44
PSEN1-221ENST00000557293 KCND1Q9NSA2 647 aa12.29□□□□□ -0.44
PSEN1-221ENST00000557293 GPR83Q9NYM4 423 aa12.29□□□□□ -0.44
PSEN1-221ENST00000557293 DNAJC16Q9Y2G8 782 aa12.29□□□□□ -0.44
PSEN1-221ENST00000557293 SPTBP11277 2137 aa12.29□□□□□ -0.44
PSEN1-221ENST00000557293 DIDO1Q9BTC0 2240 aaKnown RBP12.29□□□□□ -0.44
PSEN1-221ENST00000557293 MDC1Q14676 2089 aaKnown RBP12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms