RNA–Protein interactions for RNA: ENST00000557076.5

SCFD1-223, Transcript of sec1 family domain containing 1, human

TSL 3

Gene SCFD1, Length 743 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCFD1-223	ENST00000557076	SPOPL	Q6IQ16	392 aa		4.74	□□□□□ -1.65
SCFD1-223	ENST00000557076	CXorf57	Q6NSI4	855 aa	Known RBP	4.74	□□□□□ -1.65
SCFD1-223	ENST00000557076	CNNM4	Q6P4Q7	775 aa		4.74	□□□□□ -1.65
SCFD1-223	ENST00000557076	MACC1	Q6ZN28	852 aa		4.74	□□□□□ -1.65
SCFD1-223	ENST00000557076	CCDC73	Q6ZRK6	1079 aa		4.74	□□□□□ -1.65
SCFD1-223	ENST00000557076	BEND5	Q7L4P6	421 aa		4.74	□□□□□ -1.65
SCFD1-223	ENST00000557076	CXXC5	Q7LFL8	322 aa	Known RBP	4.74	□□□□□ -1.65
SCFD1-223	ENST00000557076	MCEMP1	Q8IX19	187 aa		4.74	□□□□□ -1.65
SCFD1-223	ENST00000557076	CCAR2	Q8N163	923 aa	Known RBP	4.74	□□□□□ -1.65
SCFD1-223	ENST00000557076	ATP11C	Q8NB49	1132 aa		4.74	□□□□□ -1.65
SCFD1-223	ENST00000557076	FAM46D	Q8NEK8	389 aa		4.74	□□□□□ -1.65
SCFD1-223	ENST00000557076	OR4D9	Q8NGE8	314 aa		4.74	□□□□□ -1.65
SCFD1-223	ENST00000557076	STARD8	Q92502	1023 aa		4.74	□□□□□ -1.65
SCFD1-223	ENST00000557076	ART4	Q93070	314 aa		4.74	□□□□□ -1.65
SCFD1-223	ENST00000557076	RAB7B	Q96AH8	199 aa		4.74	□□□□□ -1.65
SCFD1-223	ENST00000557076	BTN2A3P	Q96KV6	586 aa		4.74	□□□□□ -1.65
SCFD1-223	ENST00000557076	DPYSL5	Q9BPU6	564 aa		4.74	□□□□□ -1.65
SCFD1-223	ENST00000557076	SLC29A3	Q9BZD2	475 aa		4.74	□□□□□ -1.65
SCFD1-223	ENST00000557076	IPPK	Q9H8X2	491 aa		4.74	□□□□□ -1.65
SCFD1-223	ENST00000557076	APOBEC3G	Q9HC16	384 aa	Known RBP	4.74	□□□□□ -1.65
SCFD1-223	ENST00000557076	FBXO8	Q9NRD0	319 aa		4.74	□□□□□ -1.65
SCFD1-223	ENST00000557076	AURKAIP1	Q9NWT8	199 aa	Predicted RBP	4.74	□□□□□ -1.65
SCFD1-223	ENST00000557076	SLC25A13	Q9UJS0	675 aa		4.74	□□□□□ -1.65
SCFD1-223	ENST00000557076	KIAA1257	Q9ULG3	409 aa		4.74	□□□□□ -1.65
SCFD1-223	ENST00000557076	POLH	Q9Y253	713 aa		4.74	□□□□□ -1.65
SCFD1-223	ENST00000557076	TMEM184B	Q9Y519	407 aa	Predicted RBP	4.74	□□□□□ -1.65
SCFD1-223	ENST00000557076	DGKB	Q9Y6T7	804 aa		4.74	□□□□□ -1.65
SCFD1-223	ENST00000557076	SHANK1	Q9Y566	2161 aa		4.74	□□□□□ -1.65
SCFD1-223	ENST00000557076	TRAV20	A0A0B4J274	112 aa		4.73	□□□□□ -1.65
SCFD1-223	ENST00000557076	ARHGAP10	A1A4S6	786 aa		4.73	□□□□□ -1.65
SCFD1-223	ENST00000557076		F5H5T6	163 aa		4.73	□□□□□ -1.65
SCFD1-223	ENST00000557076	INPP4B	O15327	924 aa		4.73	□□□□□ -1.65
SCFD1-223	ENST00000557076	EIF5B	O60841	1220 aa	Known RBP	4.73	□□□□□ -1.65
SCFD1-223	ENST00000557076	ZNF821	O75541	412 aa	Predicted RBP	4.73	□□□□□ -1.65
SCFD1-223	ENST00000557076	FAM155B	O75949	473 aa		4.73	□□□□□ -1.65
SCFD1-223	ENST00000557076	STK10	O94804	968 aa	Known RBP	4.73	□□□□□ -1.65
SCFD1-223	ENST00000557076	CLSTN1	O94985	981 aa		4.73	□□□□□ -1.65
SCFD1-223	ENST00000557076	RASGRP1	O95267	797 aa		4.73	□□□□□ -1.65
SCFD1-223	ENST00000557076	TNF	P01375	233 aa		4.73	□□□□□ -1.65
SCFD1-223	ENST00000557076	FYN	P06241	537 aa		4.73	□□□□□ -1.65
SCFD1-223	ENST00000557076	SRC	P12931	536 aa		4.73	□□□□□ -1.65
SCFD1-223	ENST00000557076	CD58	P19256	250 aa		4.73	□□□□□ -1.65
SCFD1-223	ENST00000557076	HTR1B	P28222	390 aa		4.73	□□□□□ -1.65
SCFD1-223	ENST00000557076	GPR3	P46089	330 aa		4.73	□□□□□ -1.65
SCFD1-223	ENST00000557076	OR1D5	P58170	312 aa		4.73	□□□□□ -1.65
SCFD1-223	ENST00000557076	SRP54	P61011	504 aa	Known RBP	4.73	□□□□□ -1.65
SCFD1-223	ENST00000557076	KRT83	P78385	493 aa		4.73	□□□□□ -1.65
SCFD1-223	ENST00000557076	MC2R	Q01718	297 aa		4.73	□□□□□ -1.65
SCFD1-223	ENST00000557076	SLC20A2	Q08357	652 aa		4.73	□□□□□ -1.65
SCFD1-223	ENST00000557076	ADIG	Q0VDE8	80 aa		4.73	□□□□□ -1.65
SCFD1-223	ENST00000557076	DUSP8	Q13202	625 aa		4.73	□□□□□ -1.65
SCFD1-223	ENST00000557076	EIF4EBP2	Q13542	120 aa	Predicted RBP	4.73	□□□□□ -1.65
SCFD1-223	ENST00000557076	SEMA5A	Q13591	1074 aa		4.73	□□□□□ -1.65
SCFD1-223	ENST00000557076	NR1D2	Q14995	579 aa		4.73	□□□□□ -1.65
SCFD1-223	ENST00000557076	ARHGAP44	Q17R89	818 aa		4.73	□□□□□ -1.65
SCFD1-223	ENST00000557076	KNOP1	Q1ED39	458 aa	Known RBP	4.73	□□□□□ -1.65
SCFD1-223	ENST00000557076	ALG11	Q2TAA5	492 aa		4.73	□□□□□ -1.65
SCFD1-223	ENST00000557076	AMZ1	Q400G9	498 aa		4.73	□□□□□ -1.65
SCFD1-223	ENST00000557076	C14orf28	Q4W4Y0	310 aa		4.73	□□□□□ -1.65
SCFD1-223	ENST00000557076	ATP1A1-AS1	Q5TC04	95 aa		4.73	□□□□□ -1.65
SCFD1-223	ENST00000557076	IGFL4	Q6B9Z1	124 aa		4.73	□□□□□ -1.65
SCFD1-223	ENST00000557076	DPY19L3	Q6ZPD9	716 aa		4.73	□□□□□ -1.65
SCFD1-223	ENST00000557076	KDELC2	Q7Z4H8	507 aa		4.73	□□□□□ -1.65
SCFD1-223	ENST00000557076	C17orf82	Q86X59	251 aa	Predicted RBP	4.73	□□□□□ -1.65
SCFD1-223	ENST00000557076	UNC5B	Q8IZJ1	945 aa		4.73	□□□□□ -1.65
SCFD1-223	ENST00000557076	SIX6OS1	Q8N1H7	587 aa		4.73	□□□□□ -1.65
SCFD1-223	ENST00000557076	BMPER	Q8N8U9	685 aa		4.73	□□□□□ -1.65
SCFD1-223	ENST00000557076	CHST14	Q8NCH0	376 aa		4.73	□□□□□ -1.65
SCFD1-223	ENST00000557076	GOLGA5	Q8TBA6	731 aa		4.73	□□□□□ -1.65
SCFD1-223	ENST00000557076	PDCD6IP	Q8WUM4	868 aa	Known RBP	4.73	□□□□□ -1.65
SCFD1-223	ENST00000557076	SLC35F5	Q8WV83	523 aa		4.73	□□□□□ -1.65
SCFD1-223	ENST00000557076	TSACC	Q96A04	125 aa	Predicted RBP	4.73	□□□□□ -1.65
SCFD1-223	ENST00000557076	ARHGEF26	Q96DR7	871 aa		4.73	□□□□□ -1.65
SCFD1-223	ENST00000557076	RTP4	Q96DX8	246 aa		4.73	□□□□□ -1.65
SCFD1-223	ENST00000557076	HSFY1	Q96LI6	401 aa		4.73	□□□□□ -1.65
SCFD1-223	ENST00000557076	LURAP1	Q96LR2	239 aa		4.73	□□□□□ -1.65
SCFD1-223	ENST00000557076	SERPINB11	Q96P15	392 aa		4.73	□□□□□ -1.65
SCFD1-223	ENST00000557076	PLEKHG4B	Q96PX9	1271 aa		4.73	□□□□□ -1.65
SCFD1-223	ENST00000557076	PRMT1	Q99873	361 aa	Known RBP	4.73	□□□□□ -1.65
SCFD1-223	ENST00000557076	HEPH	Q9BQS7	1158 aa		4.73	□□□□□ -1.65
SCFD1-223	ENST00000557076	C1QTNF7	Q9BXJ2	289 aa		4.73	□□□□□ -1.65
SCFD1-223	ENST00000557076	PANK2	Q9BZ23	570 aa		4.73	□□□□□ -1.65
SCFD1-223	ENST00000557076	IMPG2	Q9BZV3	1241 aa		4.73	□□□□□ -1.65
SCFD1-223	ENST00000557076	CD244	Q9BZW8	370 aa		4.73	□□□□□ -1.65
SCFD1-223	ENST00000557076	C12orf65	Q9H3J6	166 aa	Known RBP	4.73	□□□□□ -1.65
SCFD1-223	ENST00000557076	RDH14	Q9HBH5	336 aa		4.73	□□□□□ -1.65
SCFD1-223	ENST00000557076	MRPL40	Q9NQ50	206 aa	Known RBP	4.73	□□□□□ -1.65
SCFD1-223	ENST00000557076	IL36A	Q9UHA7	158 aa		4.73	□□□□□ -1.65
SCFD1-223	ENST00000557076	SLC12A6	Q9UHW9	1150 aa		4.73	□□□□□ -1.65
SCFD1-223	ENST00000557076	XPO7	Q9UIA9	1087 aa	Known RBP	4.73	□□□□□ -1.65
SCFD1-223	ENST00000557076	TBC1D30	Q9Y2I9	924 aa		4.73	□□□□□ -1.65
SCFD1-223	ENST00000557076	PCDHGA9	Q9Y5G4	932 aa	Known RBP	4.73	□□□□□ -1.65
SCFD1-223	ENST00000557076	SRPRB	Q9Y5M8	271 aa	Known RBP	4.73	□□□□□ -1.65
SCFD1-223	ENST00000557076	TP53BP1	Q12888	1972 aa	Predicted RBP	4.73	□□□□□ -1.65
SCFD1-223	ENST00000557076	CXorf51A	A0A1B0GTR3	108 aa		4.72	□□□□□ -1.65
SCFD1-223	ENST00000557076	RHPN2P1	A8MT19	583 aa		4.72	□□□□□ -1.65
SCFD1-223	ENST00000557076	KCNU1	A8MYU2	1149 aa		4.72	□□□□□ -1.65
SCFD1-223	ENST00000557076		K7ERQ8	282 aa		4.72	□□□□□ -1.65
SCFD1-223	ENST00000557076	NEMP1	O14524	444 aa		4.72	□□□□□ -1.65
SCFD1-223	ENST00000557076	AREL1	O15033	823 aa		4.72	□□□□□ -1.65

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