RNA–Protein interactions for RNA: ENST00000556898.5

ATXN3-244, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 990 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-244ENST00000556898 ARL5AQ9Y689 179 aa5.3□□□□□ -1.56
ATXN3-244ENST00000556898 MAD1L1Q9Y6D9 718 aa5.3□□□□□ -1.56
ATXN3-244ENST00000556898 TEX264Q9Y6I9 313 aa5.3□□□□□ -1.56
ATXN3-244ENST00000556898 FAM208BQ5VWN6 2430 aa5.3□□□□□ -1.56
ATXN3-244ENST00000556898 USP24Q9UPU5 2620 aa5.3□□□□□ -1.56
ATXN3-244ENST00000556898 FANCMQ8IYD8 2048 aa5.3□□□□□ -1.56
ATXN3-244ENST00000556898 WDR87Q6ZQQ6 2873 aa5.3□□□□□ -1.56
ATXN3-244ENST00000556898 PKD1L2Q7Z442 2459 aa5.29□□□□□ -1.56
ATXN3-244ENST00000556898 A0A0J9YYE9 177 aa5.29□□□□□ -1.56
ATXN3-244ENST00000556898 CXorf51AA0A1B0GTR3 108 aa5.29□□□□□ -1.56
ATXN3-244ENST00000556898 TCRBV21S2A2A0A5A6 115 aa5.29□□□□□ -1.56
ATXN3-244ENST00000556898 TSPAN11A1L157 253 aa5.29□□□□□ -1.56
ATXN3-244ENST00000556898 CCDC151A5D8V7 595 aa5.29□□□□□ -1.56
ATXN3-244ENST00000556898 GOLGA6CA6NDK9 693 aa5.29□□□□□ -1.56
ATXN3-244ENST00000556898 GOLGA6BA6NDN3 693 aa5.29□□□□□ -1.56
ATXN3-244ENST00000556898 SDR42E2A6NKP2 422 aa5.29□□□□□ -1.56
ATXN3-244ENST00000556898 C16orf96A6NNT2 1141 aa5.29□□□□□ -1.56
ATXN3-244ENST00000556898 ERI2A8K979 691 aaKnown RBP5.29□□□□□ -1.56
ATXN3-244ENST00000556898 CXorf49A8MYA2 514 aaPredicted RBP5.29□□□□□ -1.56
ATXN3-244ENST00000556898 FOXO6A8MYZ6 492 aa5.29□□□□□ -1.56
ATXN3-244ENST00000556898 ANKRD66B4E2M5 251 aa5.29□□□□□ -1.56
ATXN3-244ENST00000556898 GPR39O43194 453 aa5.29□□□□□ -1.56
ATXN3-244ENST00000556898 RIPK2O43353 540 aa5.29□□□□□ -1.56
ATXN3-244ENST00000556898 LDB2O43679 373 aa5.29□□□□□ -1.56
ATXN3-244ENST00000556898 SYNCRIPO60506 623 aaKnown RBP5.29□□□□□ -1.56
ATXN3-244ENST00000556898 UGT1A9O60656 530 aa5.29□□□□□ -1.56
ATXN3-244ENST00000556898 SOCS5O75159 536 aa5.29□□□□□ -1.56
ATXN3-244ENST00000556898 ZNF189O75820 626 aaPredicted RBP5.29□□□□□ -1.56
ATXN3-244ENST00000556898 CLDN7O95471 211 aa5.29□□□□□ -1.56
ATXN3-244ENST00000556898 TRBC1P01850 177 aa5.29□□□□□ -1.56
ATXN3-244ENST00000556898 C1QAP02745 245 aa5.29□□□□□ -1.56
ATXN3-244ENST00000556898 FGF1P05230 155 aa5.29□□□□□ -1.56
ATXN3-244ENST00000556898 GOLGA6DP0CG33 693 aa5.29□□□□□ -1.56
ATXN3-244ENST00000556898 MLNP12872 115 aa5.29□□□□□ -1.56
ATXN3-244ENST00000556898 GM2AP17900 193 aa5.29□□□□□ -1.56
ATXN3-244ENST00000556898 HLA-DPA1P20036 260 aa5.29□□□□□ -1.56
ATXN3-244ENST00000556898 SERPINA4P29622 427 aa5.29□□□□□ -1.56
ATXN3-244ENST00000556898 DRD3P35462 400 aa5.29□□□□□ -1.56
ATXN3-244ENST00000556898 HSD17B3P37058 310 aa5.29□□□□□ -1.56
ATXN3-244ENST00000556898 ABCG1P45844 678 aa5.29□□□□□ -1.56
ATXN3-244ENST00000556898 PXNP49023 591 aaPredicted RBP5.29□□□□□ -1.56
ATXN3-244ENST00000556898 NPY2RP49146 381 aa5.29□□□□□ -1.56
ATXN3-244ENST00000556898 EPHB1P54762 984 aa5.29□□□□□ -1.56
ATXN3-244ENST00000556898 FAM193AP78312 1265 aa5.29□□□□□ -1.56
ATXN3-244ENST00000556898 MRPS21P82921 87 aaKnown RBP5.29□□□□□ -1.56
ATXN3-244ENST00000556898 RAD51Q06609 339 aa5.29□□□□□ -1.56
ATXN3-244ENST00000556898 CNTN1Q12860 1018 aa5.29□□□□□ -1.56
ATXN3-244ENST00000556898 RALGDSQ12967 914 aa5.29□□□□□ -1.56
ATXN3-244ENST00000556898 MPP2Q14168 576 aa5.29□□□□□ -1.56
ATXN3-244ENST00000556898 CST6Q15828 149 aa5.29□□□□□ -1.56
ATXN3-244ENST00000556898 PLK5Q496M5 336 aa5.29□□□□□ -1.56
ATXN3-244ENST00000556898 SOWAHCQ53LP3 525 aaPredicted RBP5.29□□□□□ -1.56
ATXN3-244ENST00000556898 ZNF805Q5CZA5 627 aa5.29□□□□□ -1.56
ATXN3-244ENST00000556898 SNAP47Q5SQN1 464 aa5.29□□□□□ -1.56
ATXN3-244ENST00000556898 CASC4Q6P4E1 433 aa5.29□□□□□ -1.56
ATXN3-244ENST00000556898 EMBQ6PCB8 327 aa5.29□□□□□ -1.56
ATXN3-244ENST00000556898 FBXL19Q6PCT2 694 aa5.29□□□□□ -1.56
ATXN3-244ENST00000556898 CRTC1Q6UUV9 634 aa5.29□□□□□ -1.56
ATXN3-244ENST00000556898 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.29□□□□□ -1.56
ATXN3-244ENST00000556898 KDM7AQ6ZMT4 941 aa5.29□□□□□ -1.56
ATXN3-244ENST00000556898 UNC5AQ6ZN44 842 aa5.29□□□□□ -1.56
ATXN3-244ENST00000556898 HSD11B1LQ7Z5J1 315 aa5.29□□□□□ -1.56
ATXN3-244ENST00000556898 LINC00523Q86TU6 105 aa5.29□□□□□ -1.56
ATXN3-244ENST00000556898 LDB1Q86U70 411 aaPredicted RBP5.29□□□□□ -1.56
ATXN3-244ENST00000556898 FAM124AQ86V42 546 aa5.29□□□□□ -1.56
ATXN3-244ENST00000556898 TMPRSS6Q8IU80 811 aa5.29□□□□□ -1.56
ATXN3-244ENST00000556898 PDIK1LQ8N165 341 aa5.29□□□□□ -1.56
ATXN3-244ENST00000556898 HDDC3Q8N4P3 179 aa5.29□□□□□ -1.56
ATXN3-244ENST00000556898 AADATQ8N5Z0 425 aa5.29□□□□□ -1.56
ATXN3-244ENST00000556898 FRMD1Q8N878 549 aa5.29□□□□□ -1.56
ATXN3-244ENST00000556898 KDM1BQ8NB78 822 aa5.29□□□□□ -1.56
ATXN3-244ENST00000556898 GOLM1Q8NBJ4 401 aa5.29□□□□□ -1.56
ATXN3-244ENST00000556898 PPHLN1Q8NEY8 458 aaKnown RBP5.29□□□□□ -1.56
ATXN3-244ENST00000556898 OR2T3Q8NH03 318 aa5.29□□□□□ -1.56
ATXN3-244ENST00000556898 PYROXD1Q8WU10 500 aa5.29□□□□□ -1.56
ATXN3-244ENST00000556898 NAT14Q8WUY8 206 aa5.29□□□□□ -1.56
ATXN3-244ENST00000556898 ZCCHC14Q8WYQ9 949 aaKnown RBP5.29□□□□□ -1.56
ATXN3-244ENST00000556898 CAVIN3Q969G5 261 aa5.29□□□□□ -1.56
ATXN3-244ENST00000556898 ISL2Q96A47 359 aa5.29□□□□□ -1.56
ATXN3-244ENST00000556898 FUBP1Q96AE4 644 aaKnown RBP5.29□□□□□ -1.56
ATXN3-244ENST00000556898 DNAJC1Q96KC8 554 aaKnown RBP5.29□□□□□ -1.56
ATXN3-244ENST00000556898 TUBGCP5Q96RT8 1024 aa5.29□□□□□ -1.56
ATXN3-244ENST00000556898 EBNA1BP2Q99848 306 aaKnown RBP5.29□□□□□ -1.56
ATXN3-244ENST00000556898 WRAP53Q9BUR4 548 aaKnown RBP5.29□□□□□ -1.56
ATXN3-244ENST00000556898 EDEM2Q9BV94 578 aa5.29□□□□□ -1.56
ATXN3-244ENST00000556898 CPEB1Q9BZB8 566 aaKnown RBP5.29□□□□□ -1.56
ATXN3-244ENST00000556898 RSPH9Q9H1X1 276 aaPredicted RBP5.29□□□□□ -1.56
ATXN3-244ENST00000556898 SMOC1Q9H4F8 434 aa5.29□□□□□ -1.56
ATXN3-244ENST00000556898 FAM96AQ9H5X1 160 aa5.29□□□□□ -1.56
ATXN3-244ENST00000556898 SUDS3Q9H7L9 328 aaPredicted RBP5.29□□□□□ -1.56
ATXN3-244ENST00000556898 VPS37BQ9H9H4 285 aa5.29□□□□□ -1.56
ATXN3-244ENST00000556898 UGT1A7Q9HAW7 530 aa5.29□□□□□ -1.56
ATXN3-244ENST00000556898 UGT1A10Q9HAW8 530 aa5.29□□□□□ -1.56
ATXN3-244ENST00000556898 UGT1A8Q9HAW9 530 aa5.29□□□□□ -1.56
ATXN3-244ENST00000556898 ARNT2Q9HBZ2 717 aa5.29□□□□□ -1.56
ATXN3-244ENST00000556898 XAB2Q9HCS7 855 aaKnown RBP5.29□□□□□ -1.56
ATXN3-244ENST00000556898 PCDH12Q9NPG4 1184 aa5.29□□□□□ -1.56
ATXN3-244ENST00000556898 GOLGA6AQ9NYA3 693 aa5.29□□□□□ -1.56
ATXN3-244ENST00000556898 BFARQ9NZS9 450 aa5.29□□□□□ -1.56
ATXN3-244ENST00000556898 B4GALT6Q9UBX8 382 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms