RNA–Protein interactions for RNA: ENST00000556768.5

SCFD1-222, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-222ENST00000556768 TLE3Q04726 772 aa7.25□□□□□ -1.25
SCFD1-222ENST00000556768 MPP3Q13368 585 aa7.25□□□□□ -1.25
SCFD1-222ENST00000556768 GTF2H3Q13889 308 aa7.25□□□□□ -1.25
SCFD1-222ENST00000556768 PRKD1Q15139 912 aaPredicted RBP7.25□□□□□ -1.25
SCFD1-222ENST00000556768 TAZQ16635 292 aa7.25□□□□□ -1.25
SCFD1-222ENST00000556768 TMEM214Q6NUQ4 689 aaKnown RBP7.25□□□□□ -1.25
SCFD1-222ENST00000556768 RFLNAQ6ZTI6 216 aa7.25□□□□□ -1.25
SCFD1-222ENST00000556768 USP53Q70EK8 1073 aa7.25□□□□□ -1.25
SCFD1-222ENST00000556768 SLC9B2Q86UD5 537 aa7.25□□□□□ -1.25
SCFD1-222ENST00000556768 NRROSQ86YC3 692 aa7.25□□□□□ -1.25
SCFD1-222ENST00000556768 TRAM1L1Q8N609 369 aa7.25□□□□□ -1.25
SCFD1-222ENST00000556768 OR10G6Q8NH81 332 aa7.25□□□□□ -1.25
SCFD1-222ENST00000556768 BRSK1Q8TDC3 778 aa7.25□□□□□ -1.25
SCFD1-222ENST00000556768 COX14Q96I36 57 aa7.25□□□□□ -1.25
SCFD1-222ENST00000556768 SMIM14Q96QK8 99 aa7.25□□□□□ -1.25
SCFD1-222ENST00000556768 AGAP2Q99490 1192 aa7.25□□□□□ -1.25
SCFD1-222ENST00000556768 HERPUD2Q9BSE4 406 aa7.25□□□□□ -1.25
SCFD1-222ENST00000556768 ZCCHC2Q9C0B9 1178 aaKnown RBP7.25□□□□□ -1.25
SCFD1-222ENST00000556768 RBSNQ9H1K0 784 aa7.25□□□□□ -1.25
SCFD1-222ENST00000556768 GOLPH3Q9H4A6 298 aa7.25□□□□□ -1.25
SCFD1-222ENST00000556768 RDH14Q9HBH5 336 aa7.25□□□□□ -1.25
SCFD1-222ENST00000556768 UBP1Q9NZI7 540 aa7.25□□□□□ -1.25
SCFD1-222ENST00000556768 IMPACTQ9P2X3 320 aa7.25□□□□□ -1.25
SCFD1-222ENST00000556768 AAR2Q9Y312 384 aaKnown RBP7.25□□□□□ -1.25
SCFD1-222ENST00000556768 PCDHA3Q9Y5H8 950 aa7.25□□□□□ -1.25
SCFD1-222ENST00000556768 ASXL3Q9C0F0 2248 aa7.25□□□□□ -1.25
SCFD1-222ENST00000556768 MGAQ8IWI9 3026 aa7.25□□□□□ -1.25
SCFD1-222ENST00000556768 TMEM131Q92545 1883 aa7.25□□□□□ -1.25
SCFD1-222ENST00000556768 KIR2DS5A0A0G2JLQ3 304 aa7.24□□□□□ -1.25
SCFD1-222ENST00000556768 A0A0G2JNG1 304 aa7.24□□□□□ -1.25
SCFD1-222ENST00000556768 TEX51A0A1B0GUA7 166 aa7.24□□□□□ -1.25
SCFD1-222ENST00000556768 C2orf81A6NN90 581 aa7.24□□□□□ -1.25
SCFD1-222ENST00000556768 BTNL10A8MVZ5 291 aa7.24□□□□□ -1.25
SCFD1-222ENST00000556768 KIR2DS3K7RE56 304 aa7.24□□□□□ -1.25
SCFD1-222ENST00000556768 NVLO15381 856 aaKnown RBP7.24□□□□□ -1.25
SCFD1-222ENST00000556768 VEGFDO43915 354 aa7.24□□□□□ -1.25
SCFD1-222ENST00000556768 NUAK1O60285 661 aa7.24□□□□□ -1.25
SCFD1-222ENST00000556768 SNX2O60749 519 aa7.24□□□□□ -1.25
SCFD1-222ENST00000556768 CDK14O94921 469 aa7.24□□□□□ -1.25
SCFD1-222ENST00000556768 PIRTP0C851 137 aa7.24□□□□□ -1.25
SCFD1-222ENST00000556768 ACP5P13686 325 aa7.24□□□□□ -1.25
SCFD1-222ENST00000556768 HLA-DPA1P20036 260 aa7.24□□□□□ -1.25
SCFD1-222ENST00000556768 CTNNA1P35221 906 aaKnown RBP7.24□□□□□ -1.25
SCFD1-222ENST00000556768 UGT1A5P35504 534 aa7.24□□□□□ -1.25
SCFD1-222ENST00000556768 MAZP56270 477 aaKnown RBP7.24□□□□□ -1.25
SCFD1-222ENST00000556768 WNT3AP56704 352 aa7.24□□□□□ -1.25
SCFD1-222ENST00000556768 HHEXQ03014 270 aa7.24□□□□□ -1.25
SCFD1-222ENST00000556768 KCNC4Q03721 635 aa7.24□□□□□ -1.25
SCFD1-222ENST00000556768 TRA2AQ13595 282 aaKnown RBP eCLIP7.24□□□□□ -1.25
SCFD1-222ENST00000556768 IHHQ14623 411 aa7.24□□□□□ -1.25
SCFD1-222ENST00000556768 KIR2DS5Q14953 304 aa7.24□□□□□ -1.25
SCFD1-222ENST00000556768 ALS2CLQ60I27 953 aa7.24□□□□□ -1.25
SCFD1-222ENST00000556768 DARS2Q6PI48 645 aaKnown RBP7.24□□□□□ -1.25
SCFD1-222ENST00000556768 NXPE4Q6UWF7 544 aa7.24□□□□□ -1.25
SCFD1-222ENST00000556768 BBS12Q6ZW61 710 aa7.24□□□□□ -1.25
SCFD1-222ENST00000556768 B4GALNT4Q76KP1 1039 aa7.24□□□□□ -1.25
SCFD1-222ENST00000556768 PEX26Q7Z412 305 aa7.24□□□□□ -1.25
SCFD1-222ENST00000556768 TMC3Q7Z5M5 1100 aa7.24□□□□□ -1.25
SCFD1-222ENST00000556768 B3GNT8Q7Z7M8 397 aa7.24□□□□□ -1.25
SCFD1-222ENST00000556768 TRIM48Q8IWZ4 208 aa7.24□□□□□ -1.25
SCFD1-222ENST00000556768 NAGSQ8N159 534 aa7.24□□□□□ -1.25
SCFD1-222ENST00000556768 IPMKQ8NFU5 416 aa7.24□□□□□ -1.25
SCFD1-222ENST00000556768 GLYATL1Q969I3 302 aa7.24□□□□□ -1.25
SCFD1-222ENST00000556768 PLEKHG4BQ96PX9 1271 aa7.24□□□□□ -1.25
SCFD1-222ENST00000556768 FCRL5Q96RD9 977 aa7.24□□□□□ -1.25
SCFD1-222ENST00000556768 TRIB3Q96RU7 358 aa7.24□□□□□ -1.25
SCFD1-222ENST00000556768 UBL7Q96S82 380 aaPredicted RBP7.24□□□□□ -1.25
SCFD1-222ENST00000556768 OSBPL8Q9BZF1 889 aa7.24□□□□□ -1.25
SCFD1-222ENST00000556768 OR2AG1Q9H205 316 aa7.24□□□□□ -1.25
SCFD1-222ENST00000556768 OSGEPL1Q9H4B0 414 aa7.24□□□□□ -1.25
SCFD1-222ENST00000556768 NPHS2Q9NP85 383 aa7.24□□□□□ -1.25
SCFD1-222ENST00000556768 ASCL3Q9NQ33 180 aa7.24□□□□□ -1.25
SCFD1-222ENST00000556768 PISDQ9UG56 409 aa7.24□□□□□ -1.25
SCFD1-222ENST00000556768 RSPH14Q9UHP6 348 aa7.24□□□□□ -1.25
SCFD1-222ENST00000556768 AMFRQ9UKV5 643 aa7.24□□□□□ -1.25
SCFD1-222ENST00000556768 ATXN7L1Q9ULK2 861 aaPredicted RBP7.24□□□□□ -1.25
SCFD1-222ENST00000556768 ZNF711Q9Y462 761 aa7.24□□□□□ -1.25
SCFD1-222ENST00000556768 PRKAB1Q9Y478 270 aa7.24□□□□□ -1.25
SCFD1-222ENST00000556768 LOXL2Q9Y4K0 774 aa7.24□□□□□ -1.25
SCFD1-222ENST00000556768 PCDHGA7Q9Y5G6 932 aa7.24□□□□□ -1.25
SCFD1-222ENST00000556768 IGSF10Q6WRI0 2623 aa7.24□□□□□ -1.25
SCFD1-222ENST00000556768 ATMQ13315 3056 aa7.24□□□□□ -1.25
SCFD1-222ENST00000556768 TRBV23OR9-2A0A075B6M9 112 aa7.24□□□□□ -1.25
SCFD1-222ENST00000556768 LOC285095A0A1B0GVY8 99 aa7.24□□□□□ -1.25
SCFD1-222ENST00000556768 FADS2P1A8MWK0 482 aa7.24□□□□□ -1.25
SCFD1-222ENST00000556768 CDRT15L2A8MXV6 281 aa7.24□□□□□ -1.25
SCFD1-222ENST00000556768 MIF4GDA9UHW6 222 aaKnown RBP7.24□□□□□ -1.25
SCFD1-222ENST00000556768 HGSO14964 777 aaPredicted RBP7.24□□□□□ -1.25
SCFD1-222ENST00000556768 KMOO15229 486 aa7.24□□□□□ -1.25
SCFD1-222ENST00000556768 B4GAT1O43505 415 aa7.24□□□□□ -1.25
SCFD1-222ENST00000556768 DUX1O43812 170 aa7.24□□□□□ -1.25
SCFD1-222ENST00000556768 PECAM1P16284 738 aaPredicted RBP7.24□□□□□ -1.25
SCFD1-222ENST00000556768 NFKB1P19838 968 aa7.24□□□□□ -1.25
SCFD1-222ENST00000556768 FASLGP48023 281 aa7.24□□□□□ -1.25
SCFD1-222ENST00000556768 IDH3AP50213 366 aa7.24□□□□□ -1.25
SCFD1-222ENST00000556768 VAV2P52735 878 aa7.24□□□□□ -1.25
SCFD1-222ENST00000556768 GEMP55040 296 aa7.24□□□□□ -1.25
SCFD1-222ENST00000556768 B4GALNT1Q00973 533 aa7.24□□□□□ -1.25
SCFD1-222ENST00000556768 PDE1BQ01064 536 aa7.24□□□□□ -1.25
SCFD1-222ENST00000556768 ZFP36L1Q07352 338 aaKnown RBP7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms