RNA–Protein interactions for RNA: ENST00000556571.1

ACTN1-221, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 568 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-221ENST00000556571 PIGHQ14442 188 aaPredicted RBP11.69□□□□□ -0.54
ACTN1-221ENST00000556571 KRT81Q14533 505 aa11.69□□□□□ -0.54
ACTN1-221ENST00000556571 QPCTQ16769 361 aa11.69□□□□□ -0.54
ACTN1-221ENST00000556571 INSCQ1MX18 579 aa11.69□□□□□ -0.54
ACTN1-221ENST00000556571 NADK2Q4G0N4 442 aa11.69□□□□□ -0.54
ACTN1-221ENST00000556571 TDRD12Q587J7 1177 aaKnown RBP11.69□□□□□ -0.54
ACTN1-221ENST00000556571 ZNF569Q5MCW4 686 aa11.69□□□□□ -0.54
ACTN1-221ENST00000556571 PAPD7Q5XG87 772 aaKnown RBP11.69□□□□□ -0.54
ACTN1-221ENST00000556571 ABRAXAS1Q6UWZ7 409 aa11.69□□□□□ -0.54
ACTN1-221ENST00000556571 BPHLQ86WA6 291 aaPredicted RBP11.69□□□□□ -0.54
ACTN1-221ENST00000556571 RSC1A1Q92681 617 aa11.69□□□□□ -0.54
ACTN1-221ENST00000556571 FATE1Q969F0 183 aa11.69□□□□□ -0.54
ACTN1-221ENST00000556571 MLPHQ9BV36 600 aaPredicted RBP11.69□□□□□ -0.54
ACTN1-221ENST00000556571 SPATA16Q9BXB7 569 aa11.69□□□□□ -0.54
ACTN1-221ENST00000556571 RAB33BQ9H082 229 aa11.69□□□□□ -0.54
ACTN1-221ENST00000556571 HAUS4Q9H6D7 363 aa11.69□□□□□ -0.54
ACTN1-221ENST00000556571 SLC40A1Q9NP59 571 aa11.69□□□□□ -0.54
ACTN1-221ENST00000556571 ACSS2Q9NR19 701 aa11.69□□□□□ -0.54
ACTN1-221ENST00000556571 MYO1AQ9UBC5 1043 aa11.69□□□□□ -0.54
ACTN1-221ENST00000556571 SLC23A2Q9UGH3 650 aa11.69□□□□□ -0.54
ACTN1-221ENST00000556571 RARRES3Q9UL19 164 aa11.69□□□□□ -0.54
ACTN1-221ENST00000556571 PCDHGB7Q9Y5F8 929 aa11.69□□□□□ -0.54
ACTN1-221ENST00000556571 KMOO15229 486 aa11.68□□□□□ -0.54
ACTN1-221ENST00000556571 SORBS2O94875 1100 aaKnown RBP11.68□□□□□ -0.54
ACTN1-221ENST00000556571 IDSP22304 550 aa11.68□□□□□ -0.54
ACTN1-221ENST00000556571 IL4RP24394 825 aa11.68□□□□□ -0.54
ACTN1-221ENST00000556571 CCNCP24863 283 aa11.68□□□□□ -0.54
ACTN1-221ENST00000556571 VARSP26640 1264 aaKnown RBP11.68□□□□□ -0.54
ACTN1-221ENST00000556571 PTPN4P29074 926 aa11.68□□□□□ -0.54
ACTN1-221ENST00000556571 CCL11P51671 97 aa11.68□□□□□ -0.54
ACTN1-221ENST00000556571 TPM4P67936 248 aa11.68□□□□□ -0.54
ACTN1-221ENST00000556571 NIPAL4Q0D2K0 466 aa11.68□□□□□ -0.54
ACTN1-221ENST00000556571 GALNT2Q10471 571 aa11.68□□□□□ -0.54
ACTN1-221ENST00000556571 TUBB3Q13509 450 aa11.68□□□□□ -0.54
ACTN1-221ENST00000556571 INPP5JQ15735 1006 aaPredicted RBP11.68□□□□□ -0.54
ACTN1-221ENST00000556571 ASIC2Q16515 512 aa11.68□□□□□ -0.54
ACTN1-221ENST00000556571 IFI16Q16666 785 aaKnown RBP11.68□□□□□ -0.54
ACTN1-221ENST00000556571 ZNF648Q5T619 568 aaPredicted RBP11.68□□□□□ -0.54
ACTN1-221ENST00000556571 AGAP9Q5VTM2 703 aa11.68□□□□□ -0.54
ACTN1-221ENST00000556571 PDPK2PQ6A1A2 396 aa11.68□□□□□ -0.54
ACTN1-221ENST00000556571 TXNRD3NBQ6F5E7 133 aa11.68□□□□□ -0.54
ACTN1-221ENST00000556571 PWWP2BQ6NUJ5 590 aa11.68□□□□□ -0.54
ACTN1-221ENST00000556571 IRGCQ6NXR0 463 aa11.68□□□□□ -0.54
ACTN1-221ENST00000556571 CRTC3Q6UUV7 619 aa11.68□□□□□ -0.54
ACTN1-221ENST00000556571 WASH2PQ6VEQ5 465 aa11.68□□□□□ -0.54
ACTN1-221ENST00000556571 FAM92BQ6ZTR7 304 aa11.68□□□□□ -0.54
ACTN1-221ENST00000556571 APTXQ7Z2E3 356 aaKnown RBP11.68□□□□□ -0.54
ACTN1-221ENST00000556571 ZNF571Q7Z3V5 609 aaPredicted RBP11.68□□□□□ -0.54
ACTN1-221ENST00000556571 ADGRG6Q86SQ4 1221 aa11.68□□□□□ -0.54
ACTN1-221ENST00000556571 SYVN1Q86TM6 617 aa11.68□□□□□ -0.54
ACTN1-221ENST00000556571 LRRTM4Q86VH4 590 aa11.68□□□□□ -0.54
ACTN1-221ENST00000556571 SIDT2Q8NBJ9 832 aaKnown RBP11.68□□□□□ -0.54
ACTN1-221ENST00000556571 UBXN4Q92575 508 aa11.68□□□□□ -0.54
ACTN1-221ENST00000556571 CXorf40BQ96DE9 158 aa11.68□□□□□ -0.54
ACTN1-221ENST00000556571 SLC41A2Q96JW4 573 aa11.68□□□□□ -0.54
ACTN1-221ENST00000556571 TSGA13Q96PP4 275 aa11.68□□□□□ -0.54
ACTN1-221ENST00000556571 TIMM29Q9BSF4 260 aa11.68□□□□□ -0.54
ACTN1-221ENST00000556571 ZSCAN5AQ9BUG6 496 aa11.68□□□□□ -0.54
ACTN1-221ENST00000556571 ADGRE3Q9BY15 652 aa11.68□□□□□ -0.54
ACTN1-221ENST00000556571 ING2Q9H160 280 aa11.68□□□□□ -0.54
ACTN1-221ENST00000556571 ARFGAP3Q9NP61 516 aa11.68□□□□□ -0.54
ACTN1-221ENST00000556571 WASH6PQ9NQA3 447 aa11.68□□□□□ -0.54
ACTN1-221ENST00000556571 RAD18Q9NS91 495 aa11.68□□□□□ -0.54
ACTN1-221ENST00000556571 SEMA5BQ9P283 1151 aa11.68□□□□□ -0.54
ACTN1-221ENST00000556571 DNAJC16Q9Y2G8 782 aa11.68□□□□□ -0.54
ACTN1-221ENST00000556571 ABCA12Q86UK0 2595 aa11.67□□□□□ -0.54
ACTN1-221ENST00000556571 SYCE3A1L190 88 aa11.67□□□□□ -0.54
ACTN1-221ENST00000556571 A1L4Q6 167 aa11.67□□□□□ -0.54
ACTN1-221ENST00000556571 ARGFXA6NJG6 315 aa11.67□□□□□ -0.54
ACTN1-221ENST00000556571 LRRC53A6NM62 1247 aa11.67□□□□□ -0.54
ACTN1-221ENST00000556571 DDX3XO00571 662 aaKnown RBP eCLIP11.67□□□□□ -0.54
ACTN1-221ENST00000556571 VEGFDO43915 354 aa11.67□□□□□ -0.54
ACTN1-221ENST00000556571 MFSD11O43934 449 aa11.67□□□□□ -0.54
ACTN1-221ENST00000556571 TIAF1O95411 115 aa11.67□□□□□ -0.54
ACTN1-221ENST00000556571 RNF224P0DH78 156 aa11.67□□□□□ -0.54
ACTN1-221ENST00000556571 BRAFP15056 766 aa11.67□□□□□ -0.54
ACTN1-221ENST00000556571 RPL10P27635 214 aaKnown RBP11.67□□□□□ -0.54
ACTN1-221ENST00000556571 DCDC1P59894 354 aa11.67□□□□□ -0.54
ACTN1-221ENST00000556571 PDE1BQ01064 536 aa11.67□□□□□ -0.54
ACTN1-221ENST00000556571 ACY1Q03154 408 aa11.67□□□□□ -0.54
ACTN1-221ENST00000556571 GPR18Q14330 331 aa11.67□□□□□ -0.54
ACTN1-221ENST00000556571 PAFAH1B3Q15102 231 aaKnown RBP11.67□□□□□ -0.54
ACTN1-221ENST00000556571 CHRNA6Q15825 494 aa11.67□□□□□ -0.54
ACTN1-221ENST00000556571 SEPT7Q16181 437 aaKnown RBP11.67□□□□□ -0.54
ACTN1-221ENST00000556571 PLA2G4EQ3MJ16 856 aa11.67□□□□□ -0.54
ACTN1-221ENST00000556571 FAM199XQ6PEV8 388 aaPredicted RBP11.67□□□□□ -0.54
ACTN1-221ENST00000556571 TRAM1L1Q8N609 369 aa11.67□□□□□ -0.54
ACTN1-221ENST00000556571 NIPA2Q8N8Q9 360 aa11.67□□□□□ -0.54
ACTN1-221ENST00000556571 FAM71BQ8TC56 605 aa11.67□□□□□ -0.54
ACTN1-221ENST00000556571 GLYATL1Q969I3 302 aa11.67□□□□□ -0.54
ACTN1-221ENST00000556571 BPIFA3Q9BQP9 254 aa11.67□□□□□ -0.54
ACTN1-221ENST00000556571 SLC29A3Q9BZD2 475 aa11.67□□□□□ -0.54
ACTN1-221ENST00000556571 AKIRIN1Q9H9L7 192 aaPredicted RBP11.67□□□□□ -0.54
ACTN1-221ENST00000556571 ZFYVE1Q9HBF4 777 aa11.67□□□□□ -0.54
ACTN1-221ENST00000556571 CASS4Q9NQ75 786 aa11.67□□□□□ -0.54
ACTN1-221ENST00000556571 AIPL1Q9NZN9 384 aa11.67□□□□□ -0.54
ACTN1-221ENST00000556571 FARSAQ9Y285 508 aaKnown RBP11.67□□□□□ -0.54
ACTN1-221ENST00000556571 ZNF451Q9Y4E5 1061 aa11.67□□□□□ -0.54
ACTN1-221ENST00000556571 IGHV5-51A0A0C4DH38 117 aa11.66□□□□□ -0.54
ACTN1-221ENST00000556571 OR52A4PA6NMU1 304 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms