RNA–Protein interactions for RNA: ENST00000556432.1

ACTN1-219, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-219ENST00000556432 HNRNPRO43390 633 aaKnown RBP13.69□□□□□ -0.22
ACTN1-219ENST00000556432 MAFKO60675 156 aa13.69□□□□□ -0.22
ACTN1-219ENST00000556432 CPNE3O75131 537 aaKnown RBP13.69□□□□□ -0.22
ACTN1-219ENST00000556432 TMEM63AO94886 807 aa13.69□□□□□ -0.22
ACTN1-219ENST00000556432 CBX6O95503 412 aa13.69□□□□□ -0.22
ACTN1-219ENST00000556432 EBLN1P0CF75 366 aa13.69□□□□□ -0.22
ACTN1-219ENST00000556432 CA4P22748 312 aa13.69□□□□□ -0.22
ACTN1-219ENST00000556432 AMPD1P23109 780 aa13.69□□□□□ -0.22
ACTN1-219ENST00000556432 RPL10P27635 214 aaKnown RBP13.69□□□□□ -0.22
ACTN1-219ENST00000556432 MIPP30301 263 aa13.69□□□□□ -0.22
ACTN1-219ENST00000556432 HCAR3P49019 387 aa13.69□□□□□ -0.22
ACTN1-219ENST00000556432 ZNF135P52742 658 aaPredicted RBP13.69□□□□□ -0.22
ACTN1-219ENST00000556432 CDH6P55285 790 aa13.69□□□□□ -0.22
ACTN1-219ENST00000556432 PPP1CAP62136 330 aa13.69□□□□□ -0.22
ACTN1-219ENST00000556432 ACY1Q03154 408 aa13.69□□□□□ -0.22
ACTN1-219ENST00000556432 GPR18Q14330 331 aa13.69□□□□□ -0.22
ACTN1-219ENST00000556432 ZNF569Q5MCW4 686 aa13.69□□□□□ -0.22
ACTN1-219ENST00000556432 MCOLN2Q8IZK6 566 aa13.69□□□□□ -0.22
ACTN1-219ENST00000556432 UBXN4Q92575 508 aa13.69□□□□□ -0.22
ACTN1-219ENST00000556432 FCRL4Q96PJ5 515 aa13.69□□□□□ -0.22
ACTN1-219ENST00000556432 AGPAT1Q99943 283 aa13.69□□□□□ -0.22
ACTN1-219ENST00000556432 POLR1EQ9GZS1 481 aaKnown RBP13.69□□□□□ -0.22
ACTN1-219ENST00000556432 WASH6PQ9NQA3 447 aa13.69□□□□□ -0.22
ACTN1-219ENST00000556432 FGF21Q9NSA1 209 aa13.69□□□□□ -0.22
ACTN1-219ENST00000556432 SAMSN1Q9NSI8 373 aaKnown RBP13.69□□□□□ -0.22
ACTN1-219ENST00000556432 POT1Q9NUX5 634 aa13.69□□□□□ -0.22
ACTN1-219ENST00000556432 PARVAQ9NVD7 372 aa13.69□□□□□ -0.22
ACTN1-219ENST00000556432 ETNK2Q9NVF9 386 aa13.69□□□□□ -0.22
ACTN1-219ENST00000556432 ZNF624Q9P2J8 865 aaPredicted RBP13.69□□□□□ -0.22
ACTN1-219ENST00000556432 TRIM10Q9UDY6 481 aa13.69□□□□□ -0.22
ACTN1-219ENST00000556432 IGHV5-51A0A0C4DH38 117 aa13.68□□□□□ -0.22
ACTN1-219ENST00000556432 TMCO5BA8MYB1 307 aa13.68□□□□□ -0.22
ACTN1-219ENST00000556432 FZD6O60353 706 aa13.68□□□□□ -0.22
ACTN1-219ENST00000556432 SCRG1O75711 98 aa13.68□□□□□ -0.22
ACTN1-219ENST00000556432 CEACAM4O75871 244 aa13.68□□□□□ -0.22
ACTN1-219ENST00000556432 SLC25A14O95258 325 aaPredicted RBP13.68□□□□□ -0.22
ACTN1-219ENST00000556432 LPOP22079 712 aaPredicted RBP13.68□□□□□ -0.22
ACTN1-219ENST00000556432 EEF1GP26641 437 aaKnown RBP13.68□□□□□ -0.22
ACTN1-219ENST00000556432 SPINT3P49223 89 aa13.68□□□□□ -0.22
ACTN1-219ENST00000556432 CLCNKAP51800 687 aa13.68□□□□□ -0.22
ACTN1-219ENST00000556432 ITGA1P56199 1179 aa13.68□□□□□ -0.22
ACTN1-219ENST00000556432 MAMLD1Q13495 774 aa13.68□□□□□ -0.22
ACTN1-219ENST00000556432 DPCR1Q3MIW9 517 aa13.68□□□□□ -0.22
ACTN1-219ENST00000556432 FKBP15Q5T1M5 1219 aa13.68□□□□□ -0.22
ACTN1-219ENST00000556432 HENMT1Q5T8I9 393 aaKnown RBP13.68□□□□□ -0.22
ACTN1-219ENST00000556432 ALS2CLQ60I27 953 aa13.68□□□□□ -0.22
ACTN1-219ENST00000556432 ARFGAP1Q8N6T3 406 aa13.68□□□□□ -0.22
ACTN1-219ENST00000556432 ENDOVQ8N8Q3 282 aaKnown RBP13.68□□□□□ -0.22
ACTN1-219ENST00000556432 CCHCR1Q8TD31 782 aa13.68□□□□□ -0.22
ACTN1-219ENST00000556432 ZNF653Q96CK0 615 aa13.68□□□□□ -0.22
ACTN1-219ENST00000556432 ZNF514Q96K75 400 aaPredicted RBP13.68□□□□□ -0.22
ACTN1-219ENST00000556432 WDR24Q96S15 920 aa13.68□□□□□ -0.22
ACTN1-219ENST00000556432 SPATA16Q9BXB7 569 aa13.68□□□□□ -0.22
ACTN1-219ENST00000556432 ILKAPQ9H0C8 392 aaPredicted RBP13.68□□□□□ -0.22
ACTN1-219ENST00000556432 CHST8Q9H2A9 424 aa13.68□□□□□ -0.22
ACTN1-219ENST00000556432 SLC40A1Q9NP59 571 aa13.68□□□□□ -0.22
ACTN1-219ENST00000556432 DIDO1Q9BTC0 2240 aaKnown RBP13.67□□□□□ -0.22
ACTN1-219ENST00000556432 SLC4A1P02730 911 aa13.67□□□□□ -0.22
ACTN1-219ENST00000556432 KLK3P07288 261 aaPredicted RBP13.67□□□□□ -0.22
ACTN1-219ENST00000556432 PRF1P14222 555 aa13.67□□□□□ -0.22
ACTN1-219ENST00000556432 ZNF7P17097 686 aaPredicted RBP13.67□□□□□ -0.22
ACTN1-219ENST00000556432 DRG2P55039 364 aaKnown RBP13.67□□□□□ -0.22
ACTN1-219ENST00000556432 RRADP55042 308 aa13.67□□□□□ -0.22
ACTN1-219ENST00000556432 DSC2Q02487 901 aa13.67□□□□□ -0.22
ACTN1-219ENST00000556432 PLCL1Q15111 1095 aa13.67□□□□□ -0.22
ACTN1-219ENST00000556432 SMTNL2Q2TAL5 461 aa13.67□□□□□ -0.22
ACTN1-219ENST00000556432 PLEKHN1Q494U1 663 aaPredicted RBP13.67□□□□□ -0.22
ACTN1-219ENST00000556432 ANKRD20A8PQ5CZ79 823 aa13.67□□□□□ -0.22
ACTN1-219ENST00000556432 FAM69BQ5VUD6 431 aa13.67□□□□□ -0.22
ACTN1-219ENST00000556432 ACAD10Q6JQN1 1059 aa13.67□□□□□ -0.22
ACTN1-219ENST00000556432 CERS6Q6ZMG9 384 aa13.67□□□□□ -0.22
ACTN1-219ENST00000556432 BPHLQ86WA6 291 aaPredicted RBP13.67□□□□□ -0.22
ACTN1-219ENST00000556432 PSTKQ8IV42 348 aaKnown RBP13.67□□□□□ -0.22
ACTN1-219ENST00000556432 RBM12BQ8IXT5 1001 aaKnown RBP13.67□□□□□ -0.22
ACTN1-219ENST00000556432 HSPH1Q92598 858 aa13.67□□□□□ -0.22
ACTN1-219ENST00000556432 SLC41A2Q96JW4 573 aa13.67□□□□□ -0.22
ACTN1-219ENST00000556432 EPHA6Q9UF33 1036 aa13.67□□□□□ -0.22
ACTN1-219ENST00000556432 SLC23A2Q9UGH3 650 aa13.67□□□□□ -0.22
ACTN1-219ENST00000556432 B3GNT3Q9Y2A9 372 aa13.67□□□□□ -0.22
ACTN1-219ENST00000556432 UBA6A0AVT1 1052 aaPredicted RBP13.66□□□□□ -0.22
ACTN1-219ENST00000556432 KMOO15229 486 aa13.66□□□□□ -0.22
ACTN1-219ENST00000556432 GRNP28799 593 aaKnown RBP13.66□□□□□ -0.22
ACTN1-219ENST00000556432 SERPINB6P35237 376 aa13.66□□□□□ -0.22
ACTN1-219ENST00000556432 VAV2P52735 878 aa13.66□□□□□ -0.22
ACTN1-219ENST00000556432 GPS2Q13227 327 aa13.66□□□□□ -0.22
ACTN1-219ENST00000556432 LAMB3Q13751 1172 aa13.66□□□□□ -0.22
ACTN1-219ENST00000556432 DNTTIP2Q5QJE6 756 aaKnown RBP13.66□□□□□ -0.22
ACTN1-219ENST00000556432 VWA5B1Q5TIE3 1220 aa13.66□□□□□ -0.22
ACTN1-219ENST00000556432 LYPLAL1Q5VWZ2 237 aa13.66□□□□□ -0.22
ACTN1-219ENST00000556432 KLHL35Q6PF15 583 aa13.66□□□□□ -0.22
ACTN1-219ENST00000556432 CYP4V2Q6ZWL3 525 aaPredicted RBP13.66□□□□□ -0.22
ACTN1-219ENST00000556432 MED25Q71SY5 747 aa13.66□□□□□ -0.22
ACTN1-219ENST00000556432 LRRTM4Q86VH4 590 aa13.66□□□□□ -0.22
ACTN1-219ENST00000556432 TMEM102Q8N9M5 508 aaPredicted RBP13.66□□□□□ -0.22
ACTN1-219ENST00000556432 NEK11Q8NG66 645 aa13.66□□□□□ -0.22
ACTN1-219ENST00000556432 SGSM3Q96HU1 749 aa13.66□□□□□ -0.22
ACTN1-219ENST00000556432 MAP3K3Q99759 626 aa13.66□□□□□ -0.22
ACTN1-219ENST00000556432 TDRD1Q9BXT4 1180 aaKnown RBP13.66□□□□□ -0.22
ACTN1-219ENST00000556432 TRIM7Q9C029 511 aa13.66□□□□□ -0.22
ACTN1-219ENST00000556432 UNKQ9C0B0 810 aaKnown RBP13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms