RNA–Protein interactions for RNA: ENST00000555905.5

TMEM260-208, Transcript of transmembrane protein 260, humanhuman

TSL 5

Gene TMEM260, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-208ENST00000555905 BIRC8Q96P09 236 aa10.91□□□□□ -0.66
TMEM260-208ENST00000555905 NDNQ99608 321 aa10.91□□□□□ -0.66
TMEM260-208ENST00000555905 MYOCQ99972 504 aa10.91□□□□□ -0.66
TMEM260-208ENST00000555905 AARSD1Q9BTE6 412 aaKnown RBP10.91□□□□□ -0.66
TMEM260-208ENST00000555905 BOCQ9BWV1 1114 aa10.91□□□□□ -0.66
TMEM260-208ENST00000555905 TSSK1BQ9BXA7 367 aa10.91□□□□□ -0.66
TMEM260-208ENST00000555905 TEX101Q9BY14 249 aa10.91□□□□□ -0.66
TMEM260-208ENST00000555905 FAM126AQ9BYI3 521 aaPredicted RBP10.91□□□□□ -0.66
TMEM260-208ENST00000555905 P2RY12Q9H244 342 aa10.91□□□□□ -0.66
TMEM260-208ENST00000555905 EPHX3Q9H6B9 360 aa10.91□□□□□ -0.66
TMEM260-208ENST00000555905 TRIM39Q9HCM9 518 aa10.91□□□□□ -0.66
TMEM260-208ENST00000555905 SENP1Q9P0U3 644 aa10.91□□□□□ -0.66
TMEM260-208ENST00000555905 LHX6Q9UPM6 363 aa10.91□□□□□ -0.66
TMEM260-208ENST00000555905 VWA7Q9Y334 891 aa10.91□□□□□ -0.66
TMEM260-208ENST00000555905 OR1A2Q9Y585 309 aa10.91□□□□□ -0.66
TMEM260-208ENST00000555905 HS3ST3A1Q9Y663 406 aa10.91□□□□□ -0.66
TMEM260-208ENST00000555905 CEP192Q8TEP8 1941 aa10.91□□□□□ -0.66
TMEM260-208ENST00000555905 CACNA1IQ9P0X4 2223 aa10.9□□□□□ -0.66
TMEM260-208ENST00000555905 A0A1W2PPC4 97 aa10.9□□□□□ -0.66
TMEM260-208ENST00000555905 HMX2A2RU54 273 aa10.9□□□□□ -0.66
TMEM260-208ENST00000555905 HMGB1P1B2RPK0 211 aaPredicted RBP10.9□□□□□ -0.66
TMEM260-208ENST00000555905 E5RI56 91 aa10.9□□□□□ -0.66
TMEM260-208ENST00000555905 CACNB4O00305 520 aaPredicted RBP10.9□□□□□ -0.66
TMEM260-208ENST00000555905 TOR1BO14657 336 aa10.9□□□□□ -0.66
TMEM260-208ENST00000555905 TPP1O14773 563 aa10.9□□□□□ -0.66
TMEM260-208ENST00000555905 VEGFDO43915 354 aa10.9□□□□□ -0.66
TMEM260-208ENST00000555905 MTX2O75431 263 aa10.9□□□□□ -0.66
TMEM260-208ENST00000555905 VPS26AO75436 327 aa10.9□□□□□ -0.66
TMEM260-208ENST00000555905 RHOBTB1O94844 696 aa10.9□□□□□ -0.66
TMEM260-208ENST00000555905 ASMTLO95671 621 aa10.9□□□□□ -0.66
TMEM260-208ENST00000555905 HOXC4P09017 264 aaPredicted RBP10.9□□□□□ -0.66
TMEM260-208ENST00000555905 MYCLP1P12525 358 aaPredicted RBP10.9□□□□□ -0.66
TMEM260-208ENST00000555905 STMN1P16949 149 aa10.9□□□□□ -0.66
TMEM260-208ENST00000555905 CHRM3P20309 590 aa10.9□□□□□ -0.66
TMEM260-208ENST00000555905 CD27P26842 260 aa10.9□□□□□ -0.66
TMEM260-208ENST00000555905 CRABP2P29373 138 aa10.9□□□□□ -0.66
TMEM260-208ENST00000555905 TYK2P29597 1187 aa10.9□□□□□ -0.66
TMEM260-208ENST00000555905 AVPR2P30518 371 aa10.9□□□□□ -0.66
TMEM260-208ENST00000555905 RAB10P61026 200 aa10.9□□□□□ -0.66
TMEM260-208ENST00000555905 B4GALNT1Q00973 533 aa10.9□□□□□ -0.66
TMEM260-208ENST00000555905 CTSL3PQ5NE16 218 aa10.9□□□□□ -0.66
TMEM260-208ENST00000555905 RBM20Q5T481 1227 aaKnown RBP10.9□□□□□ -0.66
TMEM260-208ENST00000555905 ZNF648Q5T619 568 aaPredicted RBP10.9□□□□□ -0.66
TMEM260-208ENST00000555905 UGT3A1Q6NUS8 523 aa10.9□□□□□ -0.66
TMEM260-208ENST00000555905 ZNF549Q6P9A3 640 aa10.9□□□□□ -0.66
TMEM260-208ENST00000555905 RAPH1Q70E73 1250 aa10.9□□□□□ -0.66
TMEM260-208ENST00000555905 DET1Q7L5Y6 550 aa10.9□□□□□ -0.66
TMEM260-208ENST00000555905 CCDC91Q7Z6B0 441 aa10.9□□□□□ -0.66
TMEM260-208ENST00000555905 TRIM74Q86UV6 250 aa10.9□□□□□ -0.66
TMEM260-208ENST00000555905 TRABD2AQ86V40 505 aa10.9□□□□□ -0.66
TMEM260-208ENST00000555905 SLC41A1Q8IVJ1 513 aa10.9□□□□□ -0.66
TMEM260-208ENST00000555905 SRRM1Q8IYB3 904 aaKnown RBP10.9□□□□□ -0.66
TMEM260-208ENST00000555905 MAML2Q8IZL2 1156 aaPredicted RBP10.9□□□□□ -0.66
TMEM260-208ENST00000555905 DEFB119Q8N690 84 aa10.9□□□□□ -0.66
TMEM260-208ENST00000555905 CLDN19Q8N6F1 224 aa10.9□□□□□ -0.66
TMEM260-208ENST00000555905 FAM174AQ8TBP5 190 aa10.9□□□□□ -0.66
TMEM260-208ENST00000555905 ARL8AQ96BM9 186 aa10.9□□□□□ -0.66
TMEM260-208ENST00000555905 COX14Q96I36 57 aa10.9□□□□□ -0.66
TMEM260-208ENST00000555905 ZNF514Q96K75 400 aaPredicted RBP10.9□□□□□ -0.66
TMEM260-208ENST00000555905 SMC6Q96SB8 1091 aa10.9□□□□□ -0.66
TMEM260-208ENST00000555905 APOOQ9BUR5 198 aa10.9□□□□□ -0.66
TMEM260-208ENST00000555905 OR2AG1Q9H205 316 aa10.9□□□□□ -0.66
TMEM260-208ENST00000555905 TAS2R13Q9NYV9 303 aa10.9□□□□□ -0.66
TMEM260-208ENST00000555905 TLK1Q9UKI8 766 aa10.9□□□□□ -0.66
TMEM260-208ENST00000555905 NOVA2Q9UNW9 492 aaKnown RBP10.9□□□□□ -0.66
TMEM260-208ENST00000555905 A0A1W2PPM1 405 aa10.89□□□□□ -0.67
TMEM260-208ENST00000555905 POM121BA6NF01 834 aa10.89□□□□□ -0.67
TMEM260-208ENST00000555905 A6NNZ2 444 aa10.89□□□□□ -0.67
TMEM260-208ENST00000555905 GPR89AB7ZAQ6 455 aa10.89□□□□□ -0.67
TMEM260-208ENST00000555905 CDK14O94921 469 aa10.89□□□□□ -0.67
TMEM260-208ENST00000555905 SYF2O95926 243 aaKnown RBP10.89□□□□□ -0.67
TMEM260-208ENST00000555905 FTH1P02794 183 aa10.89□□□□□ -0.67
TMEM260-208ENST00000555905 ALDOAP04075 364 aaKnown RBP10.89□□□□□ -0.67
TMEM260-208ENST00000555905 MPOP05164 745 aa10.89□□□□□ -0.67
TMEM260-208ENST00000555905 GPR89BP0CG08 455 aa10.89□□□□□ -0.67
TMEM260-208ENST00000555905 KRT4P19013 534 aa10.89□□□□□ -0.67
TMEM260-208ENST00000555905 CD9P21926 228 aa10.89□□□□□ -0.67
TMEM260-208ENST00000555905 BCKDHBP21953 392 aa10.89□□□□□ -0.67
TMEM260-208ENST00000555905 FDXRP22570 491 aa10.89□□□□□ -0.67
TMEM260-208ENST00000555905 KELP23276 732 aa10.89□□□□□ -0.67
TMEM260-208ENST00000555905 HTR1BP28222 390 aa10.89□□□□□ -0.67
TMEM260-208ENST00000555905 SKIV2L2P42285 1042 aaKnown RBP10.89□□□□□ -0.67
TMEM260-208ENST00000555905 RABIFP47224 123 aa10.89□□□□□ -0.67
TMEM260-208ENST00000555905 CDKN2DP55273 166 aa10.89□□□□□ -0.67
TMEM260-208ENST00000555905 CLDN2P57739 230 aa10.89□□□□□ -0.67
TMEM260-208ENST00000555905 KIAA1024LP59773 190 aa10.89□□□□□ -0.67
TMEM260-208ENST00000555905 YPEL5P62699 121 aa10.89□□□□□ -0.67
TMEM260-208ENST00000555905 ZNF528Q3MIS6 628 aa10.89□□□□□ -0.67
TMEM260-208ENST00000555905 KHDC1Q4VXA5 237 aaKnown RBP10.89□□□□□ -0.67
TMEM260-208ENST00000555905 TAF1BQ53T94 588 aaPredicted RBP10.89□□□□□ -0.67
TMEM260-208ENST00000555905 TTMPQ5BVD1 217 aa10.89□□□□□ -0.67
TMEM260-208ENST00000555905 TNFAIP8L3Q5GJ75 292 aa10.89□□□□□ -0.67
TMEM260-208ENST00000555905 WDR45BQ5MNZ6 344 aa10.89□□□□□ -0.67
TMEM260-208ENST00000555905 KCTD16Q68DU8 428 aa10.89□□□□□ -0.67
TMEM260-208ENST00000555905 DOK6Q6PKX4 331 aa10.89□□□□□ -0.67
TMEM260-208ENST00000555905 KYAT3Q6YP21 454 aaKnown RBP10.89□□□□□ -0.67
TMEM260-208ENST00000555905 LPCAT2Q7L5N7 544 aa10.89□□□□□ -0.67
TMEM260-208ENST00000555905 ADGRG6Q86SQ4 1221 aa10.89□□□□□ -0.67
TMEM260-208ENST00000555905 RASGEF1AQ8N9B8 481 aa10.89□□□□□ -0.67
TMEM260-208ENST00000555905 TMEM145Q8NBT3 493 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms