RNA–Protein interactions for RNA: ENST00000555569.1

PCNX4-209, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 515 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-209ENST00000555569 CCDC112Q8NEF3 446 aa13.62□□□□□ -0.23
PCNX4-209ENST00000555569 ACTL9Q8TC94 416 aa13.62□□□□□ -0.23
PCNX4-209ENST00000555569 BLOC1S5Q8TDH9 187 aa13.62□□□□□ -0.23
PCNX4-209ENST00000555569 WBP1Q96G27 269 aa13.62□□□□□ -0.23
PCNX4-209ENST00000555569 TAAR9Q96RI9 348 aa13.62□□□□□ -0.23
PCNX4-209ENST00000555569 FERMT1Q9BQL6 677 aa13.62□□□□□ -0.23
PCNX4-209ENST00000555569 TIMM29Q9BSF4 260 aa13.62□□□□□ -0.23
PCNX4-209ENST00000555569 FSD1LQ9BXM9 530 aa13.62□□□□□ -0.23
PCNX4-209ENST00000555569 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.62□□□□□ -0.23
PCNX4-209ENST00000555569 LACRTQ9GZZ8 138 aa13.62□□□□□ -0.23
PCNX4-209ENST00000555569 C10orf88Q9H8K7 445 aa13.62□□□□□ -0.23
PCNX4-209ENST00000555569 TMPRSS11EQ9UL52 423 aa13.62□□□□□ -0.23
PCNX4-209ENST00000555569 MACROD2A1Z1Q3 448 aa13.61□□□□□ -0.23
PCNX4-209ENST00000555569 CCDC66A2RUB6 948 aa13.61□□□□□ -0.23
PCNX4-209ENST00000555569 EFSO43281 561 aa13.61□□□□□ -0.23
PCNX4-209ENST00000555569 C1QL1O75973 258 aa13.61□□□□□ -0.23
PCNX4-209ENST00000555569 PTPN7P35236 360 aa13.61□□□□□ -0.23
PCNX4-209ENST00000555569 SPAM1P38567 509 aa13.61□□□□□ -0.23
PCNX4-209ENST00000555569 CETN2P41208 172 aa13.61□□□□□ -0.23
PCNX4-209ENST00000555569 MAPK9P45984 424 aa13.61□□□□□ -0.23
PCNX4-209ENST00000555569 VAV2P52735 878 aa13.61□□□□□ -0.23
PCNX4-209ENST00000555569 RWDD2BP57060 319 aa13.61□□□□□ -0.23
PCNX4-209ENST00000555569 UBE2IP63279 158 aaKnown RBP13.61□□□□□ -0.23
PCNX4-209ENST00000555569 OTUD4Q01804 1114 aaKnown RBP13.61□□□□□ -0.23
PCNX4-209ENST00000555569 C19orf57Q0VDD7 668 aa13.61□□□□□ -0.23
PCNX4-209ENST00000555569 SRSF6Q13247 344 aaKnown RBP13.61□□□□□ -0.23
PCNX4-209ENST00000555569 GTF2H3Q13889 308 aa13.61□□□□□ -0.23
PCNX4-209ENST00000555569 SNAP47Q5SQN1 464 aa13.61□□□□□ -0.23
PCNX4-209ENST00000555569 MANEAQ5SRI9 462 aa13.61□□□□□ -0.23
PCNX4-209ENST00000555569 KIAA1614Q5VZ46 1190 aa13.61□□□□□ -0.23
PCNX4-209ENST00000555569 ITPRIPL1Q6GPH6 555 aa13.61□□□□□ -0.23
PCNX4-209ENST00000555569 WDR74Q6RFH5 385 aaPredicted RBP13.61□□□□□ -0.23
PCNX4-209ENST00000555569 DTX1Q86Y01 620 aa13.61□□□□□ -0.23
PCNX4-209ENST00000555569 ZNF547Q8IVP9 402 aa13.61□□□□□ -0.23
PCNX4-209ENST00000555569 CDKL3Q8IVW4 592 aaPredicted RBP13.61□□□□□ -0.23
PCNX4-209ENST00000555569 ACRBPQ8NEB7 543 aa13.61□□□□□ -0.23
PCNX4-209ENST00000555569 GDAP1Q8TB36 358 aa13.61□□□□□ -0.23
PCNX4-209ENST00000555569 DTX3LQ8TDB6 740 aa13.61□□□□□ -0.23
PCNX4-209ENST00000555569 BRSK1Q8TDC3 778 aa13.61□□□□□ -0.23
PCNX4-209ENST00000555569 NCSTNQ92542 709 aa13.61□□□□□ -0.23
PCNX4-209ENST00000555569 TTC9Q92623 222 aa13.61□□□□□ -0.23
PCNX4-209ENST00000555569 GBA3Q9H227 469 aa13.61□□□□□ -0.23
PCNX4-209ENST00000555569 EPB41L1Q9H4G0 881 aa13.61□□□□□ -0.23
PCNX4-209ENST00000555569 IL26Q9NPH9 171 aa13.61□□□□□ -0.23
PCNX4-209ENST00000555569 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.61□□□□□ -0.23
PCNX4-209ENST00000555569 IL17CQ9P0M4 197 aa13.61□□□□□ -0.23
PCNX4-209ENST00000555569 PDP2Q9P2J9 529 aa13.61□□□□□ -0.23
PCNX4-209ENST00000555569 DNAJC16Q9Y2G8 782 aa13.61□□□□□ -0.23
PCNX4-209ENST00000555569 PKP3Q9Y446 797 aa13.61□□□□□ -0.23
PCNX4-209ENST00000555569 PCDHB11Q9Y5F2 797 aa13.61□□□□□ -0.23
PCNX4-209ENST00000555569 PCDHGA3Q9Y5H0 932 aa13.61□□□□□ -0.23
PCNX4-209ENST00000555569 ZNF106Q9H2Y7 1883 aaKnown RBP13.61□□□□□ -0.23
PCNX4-209ENST00000555569 GRID2IPA4D2P6 1211 aa13.6□□□□□ -0.23
PCNX4-209ENST00000555569 LILRA5A6NI73 299 aa13.6□□□□□ -0.23
PCNX4-209ENST00000555569 PDZK1P1A8MUH7 402 aa13.6□□□□□ -0.23
PCNX4-209ENST00000555569 B4E171 279 aa13.6□□□□□ -0.23
PCNX4-209ENST00000555569 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.6□□□□□ -0.23
PCNX4-209ENST00000555569 ANXA9O76027 345 aa13.6□□□□□ -0.23
PCNX4-209ENST00000555569 AGTP01019 485 aa13.6□□□□□ -0.23
PCNX4-209ENST00000555569 XRCC1P18887 633 aaPredicted RBP13.6□□□□□ -0.23
PCNX4-209ENST00000555569 TSPAN7P41732 249 aa13.6□□□□□ -0.23
PCNX4-209ENST00000555569 EIF3EP60228 445 aaKnown RBP13.6□□□□□ -0.23
PCNX4-209ENST00000555569 TMEM115Q12893 351 aaPredicted RBP13.6□□□□□ -0.23
PCNX4-209ENST00000555569 ATMQ13315 3056 aa13.6□□□□□ -0.23
PCNX4-209ENST00000555569 CHRNA6Q15825 494 aa13.6□□□□□ -0.23
PCNX4-209ENST00000555569 FAM151BQ6UXP7 276 aa13.6□□□□□ -0.23
PCNX4-209ENST00000555569 KIAA1328Q86T90 577 aa13.6□□□□□ -0.23
PCNX4-209ENST00000555569 GAS2L3Q86XJ1 694 aa13.6□□□□□ -0.23
PCNX4-209ENST00000555569 FAM129CQ86XR2 697 aa13.6□□□□□ -0.23
PCNX4-209ENST00000555569 TRAPPC5Q8IUR0 188 aa13.6□□□□□ -0.23
PCNX4-209ENST00000555569 TRIM48Q8IWZ4 208 aa13.6□□□□□ -0.23
PCNX4-209ENST00000555569 LRRC57Q8N9N7 239 aa13.6□□□□□ -0.23
PCNX4-209ENST00000555569 ART4Q93070 314 aa13.6□□□□□ -0.23
PCNX4-209ENST00000555569 PMEPA1Q969W9 287 aa13.6□□□□□ -0.23
PCNX4-209ENST00000555569 FICDQ9BVA6 458 aa13.6□□□□□ -0.23
PCNX4-209ENST00000555569 DDA1Q9BW61 102 aa13.6□□□□□ -0.23
PCNX4-209ENST00000555569 TBC1D10AQ9BXI6 508 aa13.6□□□□□ -0.23
PCNX4-209ENST00000555569 ZCCHC2Q9C0B9 1178 aaKnown RBP13.6□□□□□ -0.23
PCNX4-209ENST00000555569 UCK1Q9HA47 277 aa13.6□□□□□ -0.23
PCNX4-209ENST00000555569 OCIAD1Q9NX40 245 aa13.6□□□□□ -0.23
PCNX4-209ENST00000555569 SLC39A1Q9NY26 324 aa13.6□□□□□ -0.23
PCNX4-209ENST00000555569 SCHIP1Q9P0W5 487 aaPredicted RBP13.6□□□□□ -0.23
PCNX4-209ENST00000555569 KALRNO60229 2985 aa13.59□□□□□ -0.23
PCNX4-209ENST00000555569 GLYATL1P3A0A0U1RQE8 302 aa13.59□□□□□ -0.23
PCNX4-209ENST00000555569 PRR19A6NJB7 356 aa13.59□□□□□ -0.23
PCNX4-209ENST00000555569 EFCAB7A8K855 629 aa13.59□□□□□ -0.23
PCNX4-209ENST00000555569 A8MU76 341 aa13.59□□□□□ -0.23
PCNX4-209ENST00000555569 STMND1H3BQB6 276 aa13.59□□□□□ -0.23
PCNX4-209ENST00000555569 STX7O15400 261 aaKnown RBP13.59□□□□□ -0.23
PCNX4-209ENST00000555569 KCNN4O15554 427 aa13.59□□□□□ -0.23
PCNX4-209ENST00000555569 BUD23O43709 281 aaKnown RBP13.59□□□□□ -0.23
PCNX4-209ENST00000555569 UGT1A9O60656 530 aa13.59□□□□□ -0.23
PCNX4-209ENST00000555569 PPFIA2O75334 1257 aa13.59□□□□□ -0.23
PCNX4-209ENST00000555569 STK10O94804 968 aaKnown RBP13.59□□□□□ -0.23
PCNX4-209ENST00000555569 TJP3O95049 919 aa13.59□□□□□ -0.23
PCNX4-209ENST00000555569 VIPP01282 170 aa13.59□□□□□ -0.23
PCNX4-209ENST00000555569 RBP3P10745 1247 aa13.59□□□□□ -0.23
PCNX4-209ENST00000555569 VCLP18206 1134 aa13.59□□□□□ -0.23
PCNX4-209ENST00000555569 UGT1A6P19224 532 aa13.59□□□□□ -0.23
PCNX4-209ENST00000555569 UGT1A1P22309 533 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms