RNA–Protein interactions for RNA: ENST00000555252.5

MTHFD1-210, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 1 (best)

Gene MTHFD1, Length 2,053 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-210ENST00000555252 ALPLP05186 524 aa10.61□□□□□ -0.71
MTHFD1-210ENST00000555252 F7P08709 466 aaPredicted RBP10.61□□□□□ -0.71
MTHFD1-210ENST00000555252 CYBAP13498 195 aa10.61□□□□□ -0.71
MTHFD1-210ENST00000555252 HOXB8P17481 243 aaPredicted RBP10.61□□□□□ -0.71
MTHFD1-210ENST00000555252 YWHAQP27348 245 aa10.61□□□□□ -0.71
MTHFD1-210ENST00000555252 ETFBP38117 255 aa10.61□□□□□ -0.71
MTHFD1-210ENST00000555252 RAD23AP54725 363 aa10.61□□□□□ -0.71
MTHFD1-210ENST00000555252 HERVK_113P63132 956 aa10.61□□□□□ -0.71
MTHFD1-210ENST00000555252 YWHAHQ04917 246 aaPredicted RBP10.61□□□□□ -0.71
MTHFD1-210ENST00000555252 IL18R1Q13478 541 aa10.61□□□□□ -0.71
MTHFD1-210ENST00000555252 ZNF460Q14592 562 aa10.61□□□□□ -0.71
MTHFD1-210ENST00000555252 ACOX1Q15067 660 aa10.61□□□□□ -0.71
MTHFD1-210ENST00000555252 PITRM1Q5JRX3 1037 aa10.61□□□□□ -0.71
MTHFD1-210ENST00000555252 FAM26DQ5JW98 314 aa10.61□□□□□ -0.71
MTHFD1-210ENST00000555252 SCD5Q86SK9 330 aa10.61□□□□□ -0.71
MTHFD1-210ENST00000555252 MON1AQ86VX9 555 aa10.61□□□□□ -0.71
MTHFD1-210ENST00000555252 DENND6AQ8IWF6 608 aa10.61□□□□□ -0.71
MTHFD1-210ENST00000555252 RIMKLAQ8IXN7 391 aa10.61□□□□□ -0.71
MTHFD1-210ENST00000555252 ATP6V0D2Q8N8Y2 350 aa10.61□□□□□ -0.71
MTHFD1-210ENST00000555252 PHF10Q8WUB8 498 aaKnown RBP10.61□□□□□ -0.71
MTHFD1-210ENST00000555252 CHAC2Q8WUX2 184 aa10.61□□□□□ -0.71
MTHFD1-210ENST00000555252 HPS1Q92902 700 aa10.61□□□□□ -0.71
MTHFD1-210ENST00000555252 POP5Q969H6 163 aaKnown RBP10.61□□□□□ -0.71
MTHFD1-210ENST00000555252 ZNF566Q969W8 418 aa10.61□□□□□ -0.71
MTHFD1-210ENST00000555252 FUBP3Q96I24 572 aaKnown RBP eCLIP10.61□□□□□ -0.71
MTHFD1-210ENST00000555252 TXNDC15Q96J42 360 aa10.61□□□□□ -0.71
MTHFD1-210ENST00000555252 MRGPRX2Q96LB1 330 aa10.61□□□□□ -0.71
MTHFD1-210ENST00000555252 ERVK-6Q9BXR3 956 aa10.61□□□□□ -0.71
MTHFD1-210ENST00000555252 FBXO44Q9H4M3 255 aa10.61□□□□□ -0.71
MTHFD1-210ENST00000555252 TNFRSF12AQ9NP84 129 aa10.61□□□□□ -0.71
MTHFD1-210ENST00000555252 SLC52A3Q9NQ40 469 aa10.61□□□□□ -0.71
MTHFD1-210ENST00000555252 OSER1Q9NX31 292 aa10.61□□□□□ -0.71
MTHFD1-210ENST00000555252 USE1Q9NZ43 259 aa10.61□□□□□ -0.71
MTHFD1-210ENST00000555252 BAG5Q9UL15 447 aa10.61□□□□□ -0.71
MTHFD1-210ENST00000555252 SCML2Q9UQR0 700 aa10.61□□□□□ -0.71
MTHFD1-210ENST00000555252 PDE10AQ9Y233 779 aa10.61□□□□□ -0.71
MTHFD1-210ENST00000555252 HS3ST4Q9Y661 456 aa10.61□□□□□ -0.71
MTHFD1-210ENST00000555252 TRPM7Q96QT4 1865 aa10.6□□□□□ -0.71
MTHFD1-210ENST00000555252 SCN10AQ9Y5Y9 1956 aa10.6□□□□□ -0.71
MTHFD1-210ENST00000555252 NEMP2A6NFY4 417 aa10.6□□□□□ -0.71
MTHFD1-210ENST00000555252 H0Y858 1186 aa10.6□□□□□ -0.71
MTHFD1-210ENST00000555252 TBC1D4O60343 1298 aa10.6□□□□□ -0.71
MTHFD1-210ENST00000555252 PMPCBO75439 489 aa10.6□□□□□ -0.71
MTHFD1-210ENST00000555252 WISP3O95389 354 aaPredicted RBP10.6□□□□□ -0.71
MTHFD1-210ENST00000555252 ENO2P09104 434 aaPredicted RBP10.6□□□□□ -0.71
MTHFD1-210ENST00000555252 RHOQP17081 205 aa10.6□□□□□ -0.71
MTHFD1-210ENST00000555252 ARNTP27540 789 aa10.6□□□□□ -0.71
MTHFD1-210ENST00000555252 ELK4P28324 431 aa10.6□□□□□ -0.71
MTHFD1-210ENST00000555252 NEK2P51955 445 aa10.6□□□□□ -0.71
MTHFD1-210ENST00000555252 WNT3AP56704 352 aa10.6□□□□□ -0.71
MTHFD1-210ENST00000555252 CTBP1Q13363 440 aa10.6□□□□□ -0.71
MTHFD1-210ENST00000555252 SPCS2Q15005 226 aa10.6□□□□□ -0.71
MTHFD1-210ENST00000555252 PLCL1Q15111 1095 aa10.6□□□□□ -0.71
MTHFD1-210ENST00000555252 NFE2Q16621 373 aaPredicted RBP10.6□□□□□ -0.71
MTHFD1-210ENST00000555252 PAN2Q504Q3 1202 aaKnown RBP10.6□□□□□ -0.71
MTHFD1-210ENST00000555252 C6orf141Q5SZD1 244 aa10.6□□□□□ -0.71
MTHFD1-210ENST00000555252 ARTNQ5T4W7 220 aa10.6□□□□□ -0.71
MTHFD1-210ENST00000555252 KANK2Q63ZY3 851 aa10.6□□□□□ -0.71
MTHFD1-210ENST00000555252 KDELC1Q6UW63 502 aa10.6□□□□□ -0.71
MTHFD1-210ENST00000555252 EFL1Q7Z2Z2 1120 aaKnown RBP10.6□□□□□ -0.71
MTHFD1-210ENST00000555252 PHYKPLQ8IUZ5 450 aa10.6□□□□□ -0.71
MTHFD1-210ENST00000555252 IMP4Q96G21 291 aaKnown RBP10.6□□□□□ -0.71
MTHFD1-210ENST00000555252 C8orf48Q96LL4 319 aa10.6□□□□□ -0.71
MTHFD1-210ENST00000555252 NSMCE3Q96MG7 304 aa10.6□□□□□ -0.71
MTHFD1-210ENST00000555252 TMEM209Q96SK2 561 aa10.6□□□□□ -0.71
MTHFD1-210ENST00000555252 YME1L1Q96TA2 773 aa10.6□□□□□ -0.71
MTHFD1-210ENST00000555252 ADAM2Q99965 735 aa10.6□□□□□ -0.71
MTHFD1-210ENST00000555252 KLHL25Q9H0H3 589 aa10.6□□□□□ -0.71
MTHFD1-210ENST00000555252 ATP13A1Q9HD20 1204 aa10.6□□□□□ -0.71
MTHFD1-210ENST00000555252 TLR9Q9NR96 1032 aa10.6□□□□□ -0.71
MTHFD1-210ENST00000555252 LEF1Q9UJU2 399 aaPredicted RBP10.6□□□□□ -0.71
MTHFD1-210ENST00000555252 OAS3Q9Y6K5 1087 aaKnown RBP10.6□□□□□ -0.71
MTHFD1-210ENST00000555252 RGS13O14921 159 aa10.59□□□□□ -0.71
MTHFD1-210ENST00000555252 MRPS14O60783 128 aaKnown RBP10.59□□□□□ -0.71
MTHFD1-210ENST00000555252 CCDC159P0C7I6 412 aa10.59□□□□□ -0.71
MTHFD1-210ENST00000555252 RAP2AP10114 183 aa10.59□□□□□ -0.71
MTHFD1-210ENST00000555252 BMP1P13497 986 aa10.59□□□□□ -0.71
MTHFD1-210ENST00000555252 KCNA5P22460 613 aa10.59□□□□□ -0.71
MTHFD1-210ENST00000555252 CD40LGP29965 261 aa10.59□□□□□ -0.71
MTHFD1-210ENST00000555252 YAP1P46937 504 aaKnown RBP10.59□□□□□ -0.71
MTHFD1-210ENST00000555252 SERPINH1P50454 418 aaKnown RBP10.59□□□□□ -0.71
MTHFD1-210ENST00000555252 ZNF157P51786 506 aaPredicted RBP10.59□□□□□ -0.71
MTHFD1-210ENST00000555252 KCNK10P57789 538 aa10.59□□□□□ -0.71
MTHFD1-210ENST00000555252 LIPEQ05469 1076 aa10.59□□□□□ -0.71
MTHFD1-210ENST00000555252 AQP6Q13520 282 aa10.59□□□□□ -0.71
MTHFD1-210ENST00000555252 NFYCQ13952 458 aa10.59□□□□□ -0.71
MTHFD1-210ENST00000555252 RCAN2Q14206 197 aa10.59□□□□□ -0.71
MTHFD1-210ENST00000555252 CTF1Q16619 201 aa10.59□□□□□ -0.71
MTHFD1-210ENST00000555252 VPS26BQ4G0F5 336 aa10.59□□□□□ -0.71
MTHFD1-210ENST00000555252 SLX4IPQ5VYV7 408 aa10.59□□□□□ -0.71
MTHFD1-210ENST00000555252 ZNF470Q6ECI4 717 aa10.59□□□□□ -0.71
MTHFD1-210ENST00000555252 TUBA3EQ6PEY2 450 aa10.59□□□□□ -0.71
MTHFD1-210ENST00000555252 PRSS48Q7RTY5 328 aa10.59□□□□□ -0.71
MTHFD1-210ENST00000555252 R3HCC1LQ7Z5L2 792 aaKnown RBP10.59□□□□□ -0.71
MTHFD1-210ENST00000555252 RAB44Q7Z6P3 723 aaPredicted RBP10.59□□□□□ -0.71
MTHFD1-210ENST00000555252 IFNL1Q8IU54 200 aa10.59□□□□□ -0.71
MTHFD1-210ENST00000555252 SVOPLQ8N434 492 aa10.59□□□□□ -0.71
MTHFD1-210ENST00000555252 MFSD4AQ8N468 514 aa10.59□□□□□ -0.71
MTHFD1-210ENST00000555252 PDZD8Q8NEN9 1154 aa10.59□□□□□ -0.71
MTHFD1-210ENST00000555252 ZNF555Q8NEP9 628 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms