RNA–Protein interactions for RNA: ENST00000554290.1

CPSF2-203, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-203ENST00000554290 SLC23A2Q9UGH3 650 aa18.49■□□□□ 0.55
CPSF2-203ENST00000554290 FAM153AQ9UHL3 310 aa18.49■□□□□ 0.55
CPSF2-203ENST00000554290 DNAJC16Q9Y2G8 782 aa18.49■□□□□ 0.55
CPSF2-203ENST00000554290 SDK2Q58EX2 2172 aa18.49■□□□□ 0.55
CPSF2-203ENST00000554290 MN1Q10571 1320 aaPredicted RBP18.49■□□□□ 0.55
CPSF2-203ENST00000554290 UBXN7O94888 489 aa18.48■□□□□ 0.55
CPSF2-203ENST00000554290 WISP1O95388 367 aa18.48■□□□□ 0.55
CPSF2-203ENST00000554290 ANKRD34CP0C6C1 535 aa18.48■□□□□ 0.55
CPSF2-203ENST00000554290 AMD1P17707 334 aa18.48■□□□□ 0.55
CPSF2-203ENST00000554290 VCLP18206 1134 aa18.48■□□□□ 0.55
CPSF2-203ENST00000554290 IDSP22304 550 aa18.48■□□□□ 0.55
CPSF2-203ENST00000554290 CDKN2BP42772 138 aa18.48■□□□□ 0.55
CPSF2-203ENST00000554290 CLCA4Q14CN2 919 aa18.48■□□□□ 0.55
CPSF2-203ENST00000554290 PRKD1Q15139 912 aaPredicted RBP18.48■□□□□ 0.55
CPSF2-203ENST00000554290 GDAP1Q8TB36 358 aa18.48■□□□□ 0.55
CPSF2-203ENST00000554290 SLC45A3Q96JT2 553 aa18.48■□□□□ 0.55
CPSF2-203ENST00000554290 TTC25Q96NG3 672 aa18.48■□□□□ 0.55
CPSF2-203ENST00000554290 SLC25A18Q9H1K4 315 aa18.48■□□□□ 0.55
CPSF2-203ENST00000554290 TRABDQ9H4I3 376 aa18.48■□□□□ 0.55
CPSF2-203ENST00000554290 SCHIP1Q9P0W5 487 aaPredicted RBP18.48■□□□□ 0.55
CPSF2-203ENST00000554290 SAE1Q9UBE0 346 aaPredicted RBP18.48■□□□□ 0.55
CPSF2-203ENST00000554290 HYOU1Q9Y4L1 999 aa18.48■□□□□ 0.55
CPSF2-203ENST00000554290 SPO11Q9Y5K1 396 aa18.48■□□□□ 0.55
CPSF2-203ENST00000554290 ZFC3H1O60293 1989 aaKnown RBP18.48■□□□□ 0.55
CPSF2-203ENST00000554290 SETXQ7Z333 2677 aaKnown RBP18.47■□□□□ 0.55
CPSF2-203ENST00000554290 TOX3O15405 576 aaPredicted RBP18.47■□□□□ 0.55
CPSF2-203ENST00000554290 CST8O60676 142 aa18.47■□□□□ 0.55
CPSF2-203ENST00000554290 MTX2O75431 263 aa18.47■□□□□ 0.55
CPSF2-203ENST00000554290 STK17BO94768 372 aa18.47■□□□□ 0.55
CPSF2-203ENST00000554290 EPOP01588 193 aa18.47■□□□□ 0.55
CPSF2-203ENST00000554290 C9P02748 559 aa18.47■□□□□ 0.55
CPSF2-203ENST00000554290 HMGCLP35914 325 aa18.47■□□□□ 0.55
CPSF2-203ENST00000554290 SLC19A1P41440 591 aa18.47■□□□□ 0.55
CPSF2-203ENST00000554290 ABHD18Q0P651 414 aa18.47■□□□□ 0.55
CPSF2-203ENST00000554290 GTF2H3Q13889 308 aa18.47■□□□□ 0.55
CPSF2-203ENST00000554290 ZDHHC20Q5W0Z9 365 aa18.47■□□□□ 0.55
CPSF2-203ENST00000554290 KAZNQ674X7 775 aa18.47■□□□□ 0.55
CPSF2-203ENST00000554290 ABRAXAS1Q6UWZ7 409 aa18.47■□□□□ 0.55
CPSF2-203ENST00000554290 WASH2PQ6VEQ5 465 aa18.47■□□□□ 0.55
CPSF2-203ENST00000554290 RBM12BQ8IXT5 1001 aaKnown RBP18.47■□□□□ 0.55
CPSF2-203ENST00000554290 BRSK1Q8TDC3 778 aa18.47■□□□□ 0.55
CPSF2-203ENST00000554290 P3H4Q92791 437 aa18.47■□□□□ 0.55
CPSF2-203ENST00000554290 C9orf72Q96LT7 481 aa18.47■□□□□ 0.55
CPSF2-203ENST00000554290 APMAPQ9HDC9 416 aa18.47■□□□□ 0.55
CPSF2-203ENST00000554290 BPIFA1Q9NP55 256 aa18.47■□□□□ 0.55
CPSF2-203ENST00000554290 WASH6PQ9NQA3 447 aa18.47■□□□□ 0.55
CPSF2-203ENST00000554290 POT1Q9NUX5 634 aa18.47■□□□□ 0.55
CPSF2-203ENST00000554290 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP18.47■□□□□ 0.55
CPSF2-203ENST00000554290 HACD3Q9P035 362 aa18.47■□□□□ 0.55
CPSF2-203ENST00000554290 ZNF624Q9P2J8 865 aaPredicted RBP18.47■□□□□ 0.55
CPSF2-203ENST00000554290 TMEM184BQ9Y519 407 aaPredicted RBP18.47■□□□□ 0.55
CPSF2-203ENST00000554290 ASH1LQ9NR48 2969 aaKnown RBP18.46■□□□□ 0.55
CPSF2-203ENST00000554290 FLNBO75369 2602 aaKnown RBP18.46■□□□□ 0.55
CPSF2-203ENST00000554290 LOC285095A0A1B0GVY8 99 aa18.46■□□□□ 0.55
CPSF2-203ENST00000554290 AKR1B15C9JRZ8 316 aaPredicted RBP18.46■□□□□ 0.55
CPSF2-203ENST00000554290 PYCARD-AS1I3L0S3 204 aa18.46■□□□□ 0.55
CPSF2-203ENST00000554290 AURKAO14965 403 aa18.46■□□□□ 0.55
CPSF2-203ENST00000554290 SUV39H1O43463 412 aa18.46■□□□□ 0.55
CPSF2-203ENST00000554290 PSTPIP1O43586 416 aa18.46■□□□□ 0.55
CPSF2-203ENST00000554290 TYRP1P17643 537 aa18.46■□□□□ 0.55
CPSF2-203ENST00000554290 CCR10P46092 362 aa18.46■□□□□ 0.55
CPSF2-203ENST00000554290 CSRP3P50461 194 aa18.46■□□□□ 0.55
CPSF2-203ENST00000554290 WNT3AP56704 352 aa18.46■□□□□ 0.55
CPSF2-203ENST00000554290 TMEM115Q12893 351 aaPredicted RBP18.46■□□□□ 0.55
CPSF2-203ENST00000554290 SEPT7Q16181 437 aaKnown RBP18.46■□□□□ 0.55
CPSF2-203ENST00000554290 TAZQ16635 292 aa18.46■□□□□ 0.55
CPSF2-203ENST00000554290 ATP13A5Q4VNC0 1218 aa18.46■□□□□ 0.55
CPSF2-203ENST00000554290 TFDP3Q5H9I0 405 aa18.46■□□□□ 0.55
CPSF2-203ENST00000554290 AGAP9Q5VTM2 703 aa18.46■□□□□ 0.55
CPSF2-203ENST00000554290 SPOCD1Q6ZMY3 1216 aa18.46■□□□□ 0.55
CPSF2-203ENST00000554290 TRAPPC5Q8IUR0 188 aa18.46■□□□□ 0.55
CPSF2-203ENST00000554290 ZNF547Q8IVP9 402 aa18.46■□□□□ 0.55
CPSF2-203ENST00000554290 CXorf40BQ96DE9 158 aa18.46■□□□□ 0.55
CPSF2-203ENST00000554290 VAT1Q99536 393 aa18.46■□□□□ 0.55
CPSF2-203ENST00000554290 TSPY26PQ9H489 355 aa18.46■□□□□ 0.55
CPSF2-203ENST00000554290 OGFRQ9NZT2 677 aa18.46■□□□□ 0.55
CPSF2-203ENST00000554290 ALG6Q9Y672 507 aa18.46■□□□□ 0.55
CPSF2-203ENST00000554290 LOC101059948A0A1B0GTJ6 334 aa18.45■□□□□ 0.54
CPSF2-203ENST00000554290 PRR19A6NJB7 356 aa18.45■□□□□ 0.54
CPSF2-203ENST00000554290 KCNJ13O60928 360 aa18.45■□□□□ 0.54
CPSF2-203ENST00000554290 PECAM1P16284 738 aaPredicted RBP18.45■□□□□ 0.54
CPSF2-203ENST00000554290 NFKB1P19838 968 aa18.45■□□□□ 0.54
CPSF2-203ENST00000554290 RPL10P27635 214 aaKnown RBP18.45■□□□□ 0.54
CPSF2-203ENST00000554290 CD68P34810 354 aaPredicted RBP18.45■□□□□ 0.54
CPSF2-203ENST00000554290 HALP42357 657 aa18.45■□□□□ 0.54
CPSF2-203ENST00000554290 HADHBP55084 474 aaKnown RBP18.45■□□□□ 0.54
CPSF2-203ENST00000554290 GFERP55789 205 aa18.45■□□□□ 0.54
CPSF2-203ENST00000554290 NFKB2Q00653 900 aa18.45■□□□□ 0.54
CPSF2-203ENST00000554290 MC1RQ01726 317 aa18.45■□□□□ 0.54
CPSF2-203ENST00000554290 FOXM1Q08050 763 aa18.45■□□□□ 0.54
CPSF2-203ENST00000554290 WASHC5Q12768 1159 aa18.45■□□□□ 0.54
CPSF2-203ENST00000554290 KHDC1Q4VXA5 237 aaKnown RBP18.45■□□□□ 0.54
CPSF2-203ENST00000554290 PID1Q7Z2X4 250 aa18.45■□□□□ 0.54
CPSF2-203ENST00000554290 TIPARPQ7Z3E1 657 aaKnown RBP18.45■□□□□ 0.54
CPSF2-203ENST00000554290 ZC3H18Q86VM9 953 aaKnown RBP18.45■□□□□ 0.54
CPSF2-203ENST00000554290 RCOR2Q8IZ40 523 aa18.45■□□□□ 0.54
CPSF2-203ENST00000554290 ESX1Q8N693 406 aa18.45■□□□□ 0.54
CPSF2-203ENST00000554290 DTX3LQ8TDB6 740 aa18.45■□□□□ 0.54
CPSF2-203ENST00000554290 TGM7Q96PF1 710 aa18.45■□□□□ 0.54
CPSF2-203ENST00000554290 ZCCHC2Q9C0B9 1178 aaKnown RBP18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms