RNA–Protein interactions for RNA: ENST00000554028.3

TMEM55B-205, humanhuman

TSL 2

Gene TMEM55B, Length 1,118 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-205ENST00000554028 LENG8Q96PV6 779 aaPredicted RBP10.35□□□□□ -0.75
TMEM55B-205ENST00000554028 KLF6Q99612 283 aaPredicted RBP10.35□□□□□ -0.75
TMEM55B-205ENST00000554028 TPSD1Q9BZJ3 242 aa10.35□□□□□ -0.75
TMEM55B-205ENST00000554028 PCED1AQ9H1Q7 454 aa10.35□□□□□ -0.75
TMEM55B-205ENST00000554028 P2RY12Q9H244 342 aa10.35□□□□□ -0.75
TMEM55B-205ENST00000554028 WDR26Q9H7D7 661 aa10.35□□□□□ -0.75
TMEM55B-205ENST00000554028 CAB39LQ9H9S4 337 aa10.35□□□□□ -0.75
TMEM55B-205ENST00000554028 PCMTD2Q9NV79 361 aa10.35□□□□□ -0.75
TMEM55B-205ENST00000554028 WSB2Q9NYS7 404 aaPredicted RBP10.35□□□□□ -0.75
TMEM55B-205ENST00000554028 DMTF1Q9Y222 760 aa10.35□□□□□ -0.75
TMEM55B-205ENST00000554028 ANKRD36A6QL64 1941 aa10.35□□□□□ -0.75
TMEM55B-205ENST00000554028 UNC80Q8N2C7 3258 aa10.34□□□□□ -0.75
TMEM55B-205ENST00000554028 IGLV3-16A0A075B6K0 115 aa10.34□□□□□ -0.75
TMEM55B-205ENST00000554028 TMEM120BA0PK00 339 aa10.34□□□□□ -0.75
TMEM55B-205ENST00000554028 TMEM221A6NGB7 291 aa10.34□□□□□ -0.75
TMEM55B-205ENST00000554028 A6NNZ2 444 aa10.34□□□□□ -0.75
TMEM55B-205ENST00000554028 FOXO6A8MYZ6 492 aa10.34□□□□□ -0.75
TMEM55B-205ENST00000554028 M0R296 226 aa10.34□□□□□ -0.75
TMEM55B-205ENST00000554028 CACNB4O00305 520 aaPredicted RBP10.34□□□□□ -0.75
TMEM55B-205ENST00000554028 TOR1BO14657 336 aa10.34□□□□□ -0.75
TMEM55B-205ENST00000554028 POLR3GO15318 223 aaPredicted RBP10.34□□□□□ -0.75
TMEM55B-205ENST00000554028 TM9SF1O15321 606 aa10.34□□□□□ -0.75
TMEM55B-205ENST00000554028 PRPF4O43172 522 aaKnown RBP eCLIP10.34□□□□□ -0.75
TMEM55B-205ENST00000554028 PHGDHO43175 533 aaKnown RBP10.34□□□□□ -0.75
TMEM55B-205ENST00000554028 CDK14O94921 469 aa10.34□□□□□ -0.75
TMEM55B-205ENST00000554028 APOA4P06727 396 aa10.34□□□□□ -0.75
TMEM55B-205ENST00000554028 F7P08709 466 aaPredicted RBP10.34□□□□□ -0.75
TMEM55B-205ENST00000554028 CD9P21926 228 aa10.34□□□□□ -0.75
TMEM55B-205ENST00000554028 HNRNPA2B1P22626 353 aaKnown RBP10.34□□□□□ -0.75
TMEM55B-205ENST00000554028 KELP23276 732 aa10.34□□□□□ -0.75
TMEM55B-205ENST00000554028 CRHR1P34998 444 aa10.34□□□□□ -0.75
TMEM55B-205ENST00000554028 CCNFP41002 786 aa10.34□□□□□ -0.75
TMEM55B-205ENST00000554028 RGS4P49798 205 aa10.34□□□□□ -0.75
TMEM55B-205ENST00000554028 SLC18A1P54219 525 aa10.34□□□□□ -0.75
TMEM55B-205ENST00000554028 TMEM115Q12893 351 aaPredicted RBP10.34□□□□□ -0.75
TMEM55B-205ENST00000554028 PDE1CQ14123 709 aaPredicted RBP10.34□□□□□ -0.75
TMEM55B-205ENST00000554028 INPP5AQ14642 412 aa10.34□□□□□ -0.75
TMEM55B-205ENST00000554028 TUBB8Q3ZCM7 444 aa10.34□□□□□ -0.75
TMEM55B-205ENST00000554028 AGAP9Q5VTM2 703 aa10.34□□□□□ -0.75
TMEM55B-205ENST00000554028 ZNF549Q6P9A3 640 aa10.34□□□□□ -0.75
TMEM55B-205ENST00000554028 MACC1Q6ZN28 852 aa10.34□□□□□ -0.75
TMEM55B-205ENST00000554028 CMC1Q7Z7K0 106 aa10.34□□□□□ -0.75
TMEM55B-205ENST00000554028 NKAPQ8N5F7 415 aaKnown RBP10.34□□□□□ -0.75
TMEM55B-205ENST00000554028 PNPLA1Q8N8W4 532 aa10.34□□□□□ -0.75
TMEM55B-205ENST00000554028 ANKRD42Q8N9B4 389 aa10.34□□□□□ -0.75
TMEM55B-205ENST00000554028 BANPQ8N9N5 519 aa10.34□□□□□ -0.75
TMEM55B-205ENST00000554028 CCDC63Q8NA47 563 aa10.34□□□□□ -0.75
TMEM55B-205ENST00000554028 TP53I13Q8NBR0 393 aaPredicted RBP10.34□□□□□ -0.75
TMEM55B-205ENST00000554028 INPP5DQ92835 1189 aa10.34□□□□□ -0.75
TMEM55B-205ENST00000554028 BIRC8Q96P09 236 aa10.34□□□□□ -0.75
TMEM55B-205ENST00000554028 BOCQ9BWV1 1114 aa10.34□□□□□ -0.75
TMEM55B-205ENST00000554028 GPR174Q9BXC1 333 aa10.34□□□□□ -0.75
TMEM55B-205ENST00000554028 EPHX3Q9H6B9 360 aa10.34□□□□□ -0.75
TMEM55B-205ENST00000554028 SARS2Q9NP81 518 aaKnown RBP10.34□□□□□ -0.75
TMEM55B-205ENST00000554028 SPATS2LQ9NUQ6 558 aaKnown RBP10.34□□□□□ -0.75
TMEM55B-205ENST00000554028 MKS1Q9NXB0 559 aa10.34□□□□□ -0.75
TMEM55B-205ENST00000554028 MID2Q9UJV3 735 aa10.34□□□□□ -0.75
TMEM55B-205ENST00000554028 IGHV1OR15-9A0A0B4J2B8 117 aa10.33□□□□□ -0.76
TMEM55B-205ENST00000554028 CCDC163A0A0D9SF12 145 aa10.33□□□□□ -0.76
TMEM55B-205ENST00000554028 GPR89AB7ZAQ6 455 aa10.33□□□□□ -0.76
TMEM55B-205ENST00000554028 PRAMEF26H0Y7S4 382 aa10.33□□□□□ -0.76
TMEM55B-205ENST00000554028 NIPSNAP2O75323 286 aa10.33□□□□□ -0.76
TMEM55B-205ENST00000554028 MTX2O75431 263 aa10.33□□□□□ -0.76
TMEM55B-205ENST00000554028 GSTM1P09488 218 aa10.33□□□□□ -0.76
TMEM55B-205ENST00000554028 GPR89BP0CG08 455 aa10.33□□□□□ -0.76
TMEM55B-205ENST00000554028 NEFHP12036 1026 aa10.33□□□□□ -0.76
TMEM55B-205ENST00000554028 FDXRP22570 491 aa10.33□□□□□ -0.76
TMEM55B-205ENST00000554028 DGKAP23743 735 aa10.33□□□□□ -0.76
TMEM55B-205ENST00000554028 HTR1BP28222 390 aa10.33□□□□□ -0.76
TMEM55B-205ENST00000554028 HOXA6P31267 233 aa10.33□□□□□ -0.76
TMEM55B-205ENST00000554028 TRIM23P36406 574 aa10.33□□□□□ -0.76
TMEM55B-205ENST00000554028 MAGEA12P43365 314 aa10.33□□□□□ -0.76
TMEM55B-205ENST00000554028 PXNP49023 591 aaPredicted RBP10.33□□□□□ -0.76
TMEM55B-205ENST00000554028 CDKN2DP55273 166 aa10.33□□□□□ -0.76
TMEM55B-205ENST00000554028 IL2P60568 153 aa10.33□□□□□ -0.76
TMEM55B-205ENST00000554028 PPP2CBP62714 309 aa10.33□□□□□ -0.76
TMEM55B-205ENST00000554028 PPP2CAP67775 309 aa10.33□□□□□ -0.76
TMEM55B-205ENST00000554028 GSTM4Q03013 218 aa10.33□□□□□ -0.76
TMEM55B-205ENST00000554028 IRF4Q15306 451 aa10.33□□□□□ -0.76
TMEM55B-205ENST00000554028 ZKSCAN8Q15776 578 aaPredicted RBP10.33□□□□□ -0.76
TMEM55B-205ENST00000554028 CCDC153Q494R4 210 aa10.33□□□□□ -0.76
TMEM55B-205ENST00000554028 PPM1JQ5JR12 505 aa10.33□□□□□ -0.76
TMEM55B-205ENST00000554028 HHATQ5VTY9 493 aa10.33□□□□□ -0.76
TMEM55B-205ENST00000554028 KYAT3Q6YP21 454 aaKnown RBP10.33□□□□□ -0.76
TMEM55B-205ENST00000554028 KDM7AQ6ZMT4 941 aa10.33□□□□□ -0.76
TMEM55B-205ENST00000554028 MICALCLQ6ZW33 695 aa10.33□□□□□ -0.76
TMEM55B-205ENST00000554028 DET1Q7L5Y6 550 aa10.33□□□□□ -0.76
TMEM55B-205ENST00000554028 OTOAQ7RTW8 1153 aa10.33□□□□□ -0.76
TMEM55B-205ENST00000554028 TAX1BP1Q86VP1 789 aa10.33□□□□□ -0.76
TMEM55B-205ENST00000554028 HEATR4Q86WZ0 1026 aa10.33□□□□□ -0.76
TMEM55B-205ENST00000554028 CLDN19Q8N6F1 224 aa10.33□□□□□ -0.76
TMEM55B-205ENST00000554028 CADM4Q8NFZ8 388 aa10.33□□□□□ -0.76
TMEM55B-205ENST00000554028 FAM174AQ8TBP5 190 aa10.33□□□□□ -0.76
TMEM55B-205ENST00000554028 DYDC1Q8WWB3 177 aa10.33□□□□□ -0.76
TMEM55B-205ENST00000554028 SREK1Q8WXA9 508 aaKnown RBP10.33□□□□□ -0.76
TMEM55B-205ENST00000554028 FOXJ1Q92949 421 aa10.33□□□□□ -0.76
TMEM55B-205ENST00000554028 CENPTQ96BT3 561 aa10.33□□□□□ -0.76
TMEM55B-205ENST00000554028 SGF29Q96ES7 293 aa10.33□□□□□ -0.76
TMEM55B-205ENST00000554028 SCYL1Q96KG9 808 aa10.33□□□□□ -0.76
TMEM55B-205ENST00000554028 GPR21Q99679 349 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms