RNA–Protein interactions for RNA: ENST00000553751.1

FOXA1-203, Transcript of forkhead box A1, humanhuman

TSL 4

Gene FOXA1, Length 507 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-203ENST00000553751 MS4A14Q96JA4 679 aa20.08■□□□□ 0.81
FOXA1-203ENST00000553751 ASB8Q9H765 288 aa20.08■□□□□ 0.81
FOXA1-203ENST00000553751 HOMER3Q9NSC5 361 aa20.08■□□□□ 0.81
FOXA1-203ENST00000553751 TTC7AQ9ULT0 858 aaPredicted RBP20.08■□□□□ 0.81
FOXA1-203ENST00000553751 A0A1W2PNU3 283 aaPredicted RBP20.07■□□□□ 0.8
FOXA1-203ENST00000553751 E7EVH7 732 aa20.07■□□□□ 0.8
FOXA1-203ENST00000553751 B4GAT1O43505 415 aa20.07■□□□□ 0.8
FOXA1-203ENST00000553751 SNX2O60749 519 aa20.07■□□□□ 0.8
FOXA1-203ENST00000553751 F3P13726 295 aa20.07■□□□□ 0.8
FOXA1-203ENST00000553751 GRIA1P42261 906 aa20.07■□□□□ 0.8
FOXA1-203ENST00000553751 CTSCP53634 463 aa20.07■□□□□ 0.8
FOXA1-203ENST00000553751 OR1D5P58170 312 aa20.07■□□□□ 0.8
FOXA1-203ENST00000553751 CHCHD2P9Q5T1J5 151 aaPredicted RBP20.07■□□□□ 0.8
FOXA1-203ENST00000553751 IYDQ6PHW0 289 aa20.07■□□□□ 0.8
FOXA1-203ENST00000553751 MICALCLQ6ZW33 695 aa20.07■□□□□ 0.8
FOXA1-203ENST00000553751 B3GNT8Q7Z7M8 397 aa20.07■□□□□ 0.8
FOXA1-203ENST00000553751 GRAMD1AQ96CP6 724 aa20.07■□□□□ 0.8
FOXA1-203ENST00000553751 TTC25Q96NG3 672 aa20.07■□□□□ 0.8
FOXA1-203ENST00000553751 OSGEPL1Q9H4B0 414 aa20.07■□□□□ 0.8
FOXA1-203ENST00000553751 PRDM8Q9NQV8 689 aa20.07■□□□□ 0.8
FOXA1-203ENST00000553751 NLE1Q9NVX2 485 aaPredicted RBP20.07■□□□□ 0.8
FOXA1-203ENST00000553751 CELSR3Q9NYQ7 3312 aa20.07■□□□□ 0.8
FOXA1-203ENST00000553751 TRBV23OR9-2A0A075B6M9 112 aa20.06■□□□□ 0.8
FOXA1-203ENST00000553751 MROH6A6NGR9 719 aa20.06■□□□□ 0.8
FOXA1-203ENST00000553751 H7C0S8 307 aa20.06■□□□□ 0.8
FOXA1-203ENST00000553751 MPOP05164 745 aa20.06■□□□□ 0.8
FOXA1-203ENST00000553751 ITGALP20701 1170 aa20.06■□□□□ 0.8
FOXA1-203ENST00000553751 PSMA3P25788 255 aa20.06■□□□□ 0.8
FOXA1-203ENST00000553751 GPR3P46089 330 aa20.06■□□□□ 0.8
FOXA1-203ENST00000553751 LMAN1P49257 510 aa20.06■□□□□ 0.8
FOXA1-203ENST00000553751 BIRC2Q13490 618 aa20.06■□□□□ 0.8
FOXA1-203ENST00000553751 PPP1R21Q6ZMI0 780 aa20.06■□□□□ 0.8
FOXA1-203ENST00000553751 GSTA5Q7RTV2 222 aa20.06■□□□□ 0.8
FOXA1-203ENST00000553751 TMPRSS9Q7Z410 1059 aa20.06■□□□□ 0.8
FOXA1-203ENST00000553751 SNX20Q7Z614 316 aa20.06■□□□□ 0.8
FOXA1-203ENST00000553751 DNAAF3Q8N9W5 541 aa20.06■□□□□ 0.8
FOXA1-203ENST00000553751 COG1Q8WTW3 980 aa20.06■□□□□ 0.8
FOXA1-203ENST00000553751 OSBPL9Q96SU4 736 aa20.06■□□□□ 0.8
FOXA1-203ENST00000553751 CASS4Q9NQ75 786 aa20.06■□□□□ 0.8
FOXA1-203ENST00000553751 EIF2B3Q9NR50 452 aaKnown RBP20.06■□□□□ 0.8
FOXA1-203ENST00000553751 SMARCAL1Q9NZC9 954 aa20.06■□□□□ 0.8
FOXA1-203ENST00000553751 CRLS1Q9UJA2 301 aa20.06■□□□□ 0.8
FOXA1-203ENST00000553751 ATXN7L1Q9ULK2 861 aaPredicted RBP20.06■□□□□ 0.8
FOXA1-203ENST00000553751 PYCARDQ9ULZ3 195 aa20.06■□□□□ 0.8
FOXA1-203ENST00000553751 DNAJC16Q9Y2G8 782 aa20.06■□□□□ 0.8
FOXA1-203ENST00000553751 AK5Q9Y6K8 562 aa20.06■□□□□ 0.8
FOXA1-203ENST00000553751 UNC13CQ8NB66 2214 aa20.05■□□□□ 0.8
FOXA1-203ENST00000553751 KIR2DS5A0A0G2JLQ3 304 aa20.05■□□□□ 0.8
FOXA1-203ENST00000553751 A0A0G2JNG1 304 aa20.05■□□□□ 0.8
FOXA1-203ENST00000553751 OR2AG2A6NM03 316 aa20.05■□□□□ 0.8
FOXA1-203ENST00000553751 SRRM3A6NNA2 597 aaPredicted RBP20.05■□□□□ 0.8
FOXA1-203ENST00000553751 KIR2DS3K7RE56 304 aa20.05■□□□□ 0.8
FOXA1-203ENST00000553751 BRINP1O60477 761 aa20.05■□□□□ 0.8
FOXA1-203ENST00000553751 APRTP07741 180 aa20.05■□□□□ 0.8
FOXA1-203ENST00000553751 SLC2A4P14672 509 aa20.05■□□□□ 0.8
FOXA1-203ENST00000553751 MSNP26038 577 aaKnown RBP20.05■□□□□ 0.8
FOXA1-203ENST00000553751 ALDH4A1P30038 563 aa20.05■□□□□ 0.8
FOXA1-203ENST00000553751 AKT1P31749 480 aa20.05■□□□□ 0.8
FOXA1-203ENST00000553751 MC4RP32245 332 aa20.05■□□□□ 0.8
FOXA1-203ENST00000553751 KIR2DS5Q14953 304 aa20.05■□□□□ 0.8
FOXA1-203ENST00000553751 KCTD19Q17RG1 926 aaPredicted RBP20.05■□□□□ 0.8
FOXA1-203ENST00000553751 CCDC38Q502W7 563 aa20.05■□□□□ 0.8
FOXA1-203ENST00000553751 TTC27Q6P3X3 843 aa20.05■□□□□ 0.8
FOXA1-203ENST00000553751 C4orf22Q6V702 233 aa20.05■□□□□ 0.8
FOXA1-203ENST00000553751 NXPE1Q8N323 547 aa20.05■□□□□ 0.8
FOXA1-203ENST00000553751 STYXQ8WUJ0 223 aa20.05■□□□□ 0.8
FOXA1-203ENST00000553751 ULK4Q96C45 1275 aa20.05■□□□□ 0.8
FOXA1-203ENST00000553751 CCDC97Q96F63 343 aaPredicted RBP20.05■□□□□ 0.8
FOXA1-203ENST00000553751 AP1M1Q9BXS5 423 aa20.05■□□□□ 0.8
FOXA1-203ENST00000553751 FOXP3Q9BZS1 431 aa20.05■□□□□ 0.8
FOXA1-203ENST00000553751 SARS2Q9NP81 518 aaKnown RBP20.05■□□□□ 0.8
FOXA1-203ENST00000553751 SCHIP1Q9P0W5 487 aaPredicted RBP20.05■□□□□ 0.8
FOXA1-203ENST00000553751 SNX12Q9UMY4 172 aa20.05■□□□□ 0.8
FOXA1-203ENST00000553751 LAMA5O15230 3695 aa20.04■□□□□ 0.8
FOXA1-203ENST00000553751 TRBV5-4A0A0C4DH59 114 aa20.04■□□□□ 0.8
FOXA1-203ENST00000553751 PGRMC1O00264 195 aaKnown RBP20.04■□□□□ 0.8
FOXA1-203ENST00000553751 MSH3P20585 1137 aa20.04■□□□□ 0.8
FOXA1-203ENST00000553751 CCKBRP32239 447 aa20.04■□□□□ 0.8
FOXA1-203ENST00000553751 GABREP78334 506 aa20.04■□□□□ 0.8
FOXA1-203ENST00000553751 BASP1P80723 227 aaKnown RBP20.04■□□□□ 0.8
FOXA1-203ENST00000553751 HHEXQ03014 270 aa20.04■□□□□ 0.8
FOXA1-203ENST00000553751 GSE1Q14687 1217 aa20.04■□□□□ 0.8
FOXA1-203ENST00000553751 AMZ1Q400G9 498 aa20.04■□□□□ 0.8
FOXA1-203ENST00000553751 C3orf38Q5JPI3 329 aa20.04■□□□□ 0.8
FOXA1-203ENST00000553751 ZNF761Q86XN6 746 aaPredicted RBP20.04■□□□□ 0.8
FOXA1-203ENST00000553751 SLITRK4Q8IW52 837 aa20.04■□□□□ 0.8
FOXA1-203ENST00000553751 NAT14Q8WUY8 206 aa20.04■□□□□ 0.8
FOXA1-203ENST00000553751 LIN37Q96GY3 246 aaPredicted RBP20.04■□□□□ 0.8
FOXA1-203ENST00000553751 FAM96AQ9H5X1 160 aa20.04■□□□□ 0.8
FOXA1-203ENST00000553751 POLR1BQ9H9Y6 1135 aa20.04■□□□□ 0.8
FOXA1-203ENST00000553751 SATB2Q9UPW6 733 aa20.04■□□□□ 0.8
FOXA1-203ENST00000553751 SLC30A1Q9Y6M5 507 aa20.04■□□□□ 0.8
FOXA1-203ENST00000553751 IGHV1OR21-1A0A087WYE8 117 aa20.03■□□□□ 0.8
FOXA1-203ENST00000553751 CCDC78A2IDD5 438 aa20.03■□□□□ 0.8
FOXA1-203ENST00000553751 PMS2P1A4D2B8 440 aa20.03■□□□□ 0.8
FOXA1-203ENST00000553751 OR5K4A6NMS3 321 aa20.03■□□□□ 0.8
FOXA1-203ENST00000553751 ZW10O43264 779 aa20.03■□□□□ 0.8
FOXA1-203ENST00000553751 CPNE6O95741 557 aa20.03■□□□□ 0.8
FOXA1-203ENST00000553751 PRSS56P0CW18 603 aa20.03■□□□□ 0.8
FOXA1-203ENST00000553751 BRAFP15056 766 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms