RNA–Protein interactions for RNA: ENST00000553619.1

VTI1B-202, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-202ENST00000553619 FAM3CQ92520 227 aa5.01□□□□□ -1.61
VTI1B-202ENST00000553619 TBRG4Q969Z0 631 aaKnown RBP eCLIP5.01□□□□□ -1.61
VTI1B-202ENST00000553619 RAB7BQ96AH8 199 aa5.01□□□□□ -1.61
VTI1B-202ENST00000553619 SCRN2Q96FV2 425 aa5.01□□□□□ -1.61
VTI1B-202ENST00000553619 CFAP36Q96G28 342 aa5.01□□□□□ -1.61
VTI1B-202ENST00000553619 MRGPRX3Q96LB0 322 aa5.01□□□□□ -1.61
VTI1B-202ENST00000553619 APOL2Q9BQE5 337 aa5.01□□□□□ -1.61
VTI1B-202ENST00000553619 TDRD1Q9BXT4 1180 aaKnown RBP5.01□□□□□ -1.61
VTI1B-202ENST00000553619 GPR63Q9BZJ6 419 aa5.01□□□□□ -1.61
VTI1B-202ENST00000553619 PRDM14Q9GZV8 571 aa5.01□□□□□ -1.61
VTI1B-202ENST00000553619 CDH19Q9H159 772 aa5.01□□□□□ -1.61
VTI1B-202ENST00000553619 TMEM245Q9H330 911 aa5.01□□□□□ -1.61
VTI1B-202ENST00000553619 ZDHHC6Q9H6R6 413 aa5.01□□□□□ -1.61
VTI1B-202ENST00000553619 PARD6AQ9NPB6 346 aa5.01□□□□□ -1.61
VTI1B-202ENST00000553619 MED4Q9NPJ6 270 aa5.01□□□□□ -1.61
VTI1B-202ENST00000553619 PPANQ9NQ55 473 aaKnown RBP5.01□□□□□ -1.61
VTI1B-202ENST00000553619 HEBP1Q9NRV9 189 aa5.01□□□□□ -1.61
VTI1B-202ENST00000553619 SIRT5Q9NXA8 310 aa5.01□□□□□ -1.61
VTI1B-202ENST00000553619 NINJ2Q9NZG7 142 aa5.01□□□□□ -1.61
VTI1B-202ENST00000553619 VPS18Q9P253 973 aa5.01□□□□□ -1.61
VTI1B-202ENST00000553619 TXNDC16Q9P2K2 825 aa5.01□□□□□ -1.61
VTI1B-202ENST00000553619 THEGQ9P2T0 379 aa5.01□□□□□ -1.61
VTI1B-202ENST00000553619 DKK3Q9UBP4 350 aa5.01□□□□□ -1.61
VTI1B-202ENST00000553619 WNT16Q9UBV4 365 aa5.01□□□□□ -1.61
VTI1B-202ENST00000553619 SLC24A2Q9UI40 661 aa5.01□□□□□ -1.61
VTI1B-202ENST00000553619 CNOT6Q9ULM6 557 aaKnown RBP5.01□□□□□ -1.61
VTI1B-202ENST00000553619 SCML1Q9UN30 329 aa5.01□□□□□ -1.61
VTI1B-202ENST00000553619 SORCS3Q9UPU3 1222 aa5.01□□□□□ -1.61
VTI1B-202ENST00000553619 PKP3Q9Y446 797 aa5.01□□□□□ -1.61
VTI1B-202ENST00000553619 ACTL7AQ9Y615 435 aa5.01□□□□□ -1.61
VTI1B-202ENST00000553619 DYNC1LI1Q9Y6G9 523 aaKnown RBP5.01□□□□□ -1.61
VTI1B-202ENST00000553619 RPS6KL1Q9Y6S9 549 aa5.01□□□□□ -1.61
VTI1B-202ENST00000553619 PIAS3Q9Y6X2 628 aa5.01□□□□□ -1.61
VTI1B-202ENST00000553619 DNAH12Q6ZR08 3092 aa5.01□□□□□ -1.61
VTI1B-202ENST00000553619 TRIOBPQ9H2D6 2365 aa5□□□□□ -1.61
VTI1B-202ENST00000553619 TICRRQ7Z2Z1 1910 aa5□□□□□ -1.61
VTI1B-202ENST00000553619 A0A0J9YYE9 177 aa5□□□□□ -1.61
VTI1B-202ENST00000553619 EXOC1LA0A1B0GW35 172 aa5□□□□□ -1.61
VTI1B-202ENST00000553619 RGSL1A5PLK6 1076 aa5□□□□□ -1.61
VTI1B-202ENST00000553619 OTOL1A6NHN0 477 aaPredicted RBP5□□□□□ -1.61
VTI1B-202ENST00000553619 POC1B-GALNT4F8VUJ3 575 aa5□□□□□ -1.61
VTI1B-202ENST00000553619 F8W8V4 182 aa5□□□□□ -1.61
VTI1B-202ENST00000553619 KPNA3O00505 521 aaPredicted RBP5□□□□□ -1.61
VTI1B-202ENST00000553619 TRAFD1O14545 582 aaPredicted RBP5□□□□□ -1.61
VTI1B-202ENST00000553619 TNFRSF10CO14798 259 aa5□□□□□ -1.61
VTI1B-202ENST00000553619 TRIM24O15164 1050 aa5□□□□□ -1.61
VTI1B-202ENST00000553619 RGS16O15492 202 aaPredicted RBP5□□□□□ -1.61
VTI1B-202ENST00000553619 SLC7A4O43246 635 aa5□□□□□ -1.61
VTI1B-202ENST00000553619 CDH16O75309 829 aa5□□□□□ -1.61
VTI1B-202ENST00000553619 USP12O75317 370 aa5□□□□□ -1.61
VTI1B-202ENST00000553619 ZNF821O75541 412 aaPredicted RBP5□□□□□ -1.61
VTI1B-202ENST00000553619 KRT37O76014 449 aa5□□□□□ -1.61
VTI1B-202ENST00000553619 KRT38O76015 456 aa5□□□□□ -1.61
VTI1B-202ENST00000553619 ALDH1A2O94788 518 aa5□□□□□ -1.61
VTI1B-202ENST00000553619 PRLP01236 227 aa5□□□□□ -1.61
VTI1B-202ENST00000553619 TRBC1P01850 177 aa5□□□□□ -1.61
VTI1B-202ENST00000553619 INHBAP08476 426 aa5□□□□□ -1.61
VTI1B-202ENST00000553619 BMP7P18075 431 aa5□□□□□ -1.61
VTI1B-202ENST00000553619 PRKCHP24723 683 aa5□□□□□ -1.61
VTI1B-202ENST00000553619 CNTFP26441 200 aa5□□□□□ -1.61
VTI1B-202ENST00000553619 SSTR1P30872 391 aa5□□□□□ -1.61
VTI1B-202ENST00000553619 SPRP35270 261 aaPredicted RBP5□□□□□ -1.61
VTI1B-202ENST00000553619 GRIA1P42261 906 aa5□□□□□ -1.61
VTI1B-202ENST00000553619 POLD2P49005 469 aa5□□□□□ -1.61
VTI1B-202ENST00000553619 NUMBP49757 651 aa5□□□□□ -1.61
VTI1B-202ENST00000553619 GPX6P59796 221 aa5□□□□□ -1.61
VTI1B-202ENST00000553619 FAM193AP78312 1265 aa5□□□□□ -1.61
VTI1B-202ENST00000553619 ZBTB16Q05516 673 aa5□□□□□ -1.61
VTI1B-202ENST00000553619 MGAT5Q09328 741 aa5□□□□□ -1.61
VTI1B-202ENST00000553619 TRAF2Q12933 501 aa5□□□□□ -1.61
VTI1B-202ENST00000553619 DNAJC3Q13217 504 aa5□□□□□ -1.61
VTI1B-202ENST00000553619 ENPP2Q13822 863 aa5□□□□□ -1.61
VTI1B-202ENST00000553619 POU6F1Q14863 301 aa5□□□□□ -1.61
VTI1B-202ENST00000553619 PON2Q15165 354 aa5□□□□□ -1.61
VTI1B-202ENST00000553619 RASA2Q15283 850 aa5□□□□□ -1.61
VTI1B-202ENST00000553619 MLF2Q15773 248 aaPredicted RBP5□□□□□ -1.61
VTI1B-202ENST00000553619 KRT71Q3SY84 523 aa5□□□□□ -1.61
VTI1B-202ENST00000553619 ZNF385BQ569K4 471 aa5□□□□□ -1.61
VTI1B-202ENST00000553619 CEP85LQ5SZL2 805 aa5□□□□□ -1.61
VTI1B-202ENST00000553619 C9orf64Q5T6V5 341 aa5□□□□□ -1.61
VTI1B-202ENST00000553619 GRTP1Q5TC63 336 aa5□□□□□ -1.61
VTI1B-202ENST00000553619 AGBL2Q5U5Z8 902 aa5□□□□□ -1.61
VTI1B-202ENST00000553619 LYPLAL1Q5VWZ2 237 aa5□□□□□ -1.61
VTI1B-202ENST00000553619 KIAA0930Q6ICG6 404 aaPredicted RBP5□□□□□ -1.61
VTI1B-202ENST00000553619 UNC5AQ6ZN44 842 aa5□□□□□ -1.61
VTI1B-202ENST00000553619 ZNF534Q76KX8 674 aa5□□□□□ -1.61
VTI1B-202ENST00000553619 GLT6D1Q7Z4J2 308 aa5□□□□□ -1.61
VTI1B-202ENST00000553619 KCNMB4Q86W47 210 aa5□□□□□ -1.61
VTI1B-202ENST00000553619 SLC26A11Q86WA9 606 aa5□□□□□ -1.61
VTI1B-202ENST00000553619 LRRC6Q86X45 466 aa5□□□□□ -1.61
VTI1B-202ENST00000553619 TDRPQ86YL5 185 aa5□□□□□ -1.61
VTI1B-202ENST00000553619 SLITRK4Q8IW52 837 aa5□□□□□ -1.61
VTI1B-202ENST00000553619 TMEM151BQ8IW70 566 aa5□□□□□ -1.61
VTI1B-202ENST00000553619 CTAGE3PQ8IX95 158 aa5□□□□□ -1.61
VTI1B-202ENST00000553619 CBARPQ8N350 705 aaPredicted RBP5□□□□□ -1.61
VTI1B-202ENST00000553619 ARFGAP2Q8N6H7 521 aa5□□□□□ -1.61
VTI1B-202ENST00000553619 ST13P5Q8NFI4 369 aaPredicted RBP5□□□□□ -1.61
VTI1B-202ENST00000553619 PIP4K2CQ8TBX8 421 aa5□□□□□ -1.61
VTI1B-202ENST00000553619 BLOC1S5Q8TDH9 187 aa5□□□□□ -1.61
VTI1B-202ENST00000553619 PIH1D2Q8WWB5 315 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms