RNA–Protein interactions for RNA: ENST00000553340.1

SYNE3-202, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

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Gene SYNE3, Length 2,615 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-202ENST00000553340 FAM98BQ52LJ0 330 aaKnown RBP17.39■□□□□ 0.37
SYNE3-202ENST00000553340 GTF2IRD2BQ6EKJ0 949 aa17.39■□□□□ 0.37
SYNE3-202ENST00000553340 MSANTD2Q6P1R3 559 aa17.39■□□□□ 0.37
SYNE3-202ENST00000553340 PAQR3Q6TCH7 311 aa17.39■□□□□ 0.37
SYNE3-202ENST00000553340 R3HCC1LQ7Z5L2 792 aaKnown RBP17.39■□□□□ 0.37
SYNE3-202ENST00000553340 SCD5Q86SK9 330 aa17.39■□□□□ 0.37
SYNE3-202ENST00000553340 SYVN1Q86TM6 617 aa17.39■□□□□ 0.37
SYNE3-202ENST00000553340 GTF2IRD2Q86UP8 949 aa17.39■□□□□ 0.37
SYNE3-202ENST00000553340 TEX26Q8N6G2 289 aa17.39■□□□□ 0.37
SYNE3-202ENST00000553340 OR4L1Q8NH43 312 aa17.39■□□□□ 0.37
SYNE3-202ENST00000553340 ITFG1Q8TB96 612 aa17.39■□□□□ 0.37
SYNE3-202ENST00000553340 LPPQ93052 612 aa17.39■□□□□ 0.37
SYNE3-202ENST00000553340 NEURL2Q9BR09 285 aa17.39■□□□□ 0.37
SYNE3-202ENST00000553340 TMEM165Q9HC07 324 aa17.39■□□□□ 0.37
SYNE3-202ENST00000553340 INIPQ9NRY2 104 aa17.39■□□□□ 0.37
SYNE3-202ENST00000553340 MLYCDO95822 493 aa17.39■□□□□ 0.37
SYNE3-202ENST00000553340 PRDX3P30048 256 aaKnown RBP17.39■□□□□ 0.37
SYNE3-202ENST00000553340 SCNN1GP51170 649 aa17.39■□□□□ 0.37
SYNE3-202ENST00000553340 PLA2G16P53816 162 aa17.39■□□□□ 0.37
SYNE3-202ENST00000553340 RAD51Q06609 339 aa17.39■□□□□ 0.37
SYNE3-202ENST00000553340 PAN2Q504Q3 1202 aaKnown RBP17.39■□□□□ 0.37
SYNE3-202ENST00000553340 TTC23Q5W5X9 447 aa17.39■□□□□ 0.37
SYNE3-202ENST00000553340 SLC2A7Q6PXP3 512 aa17.39■□□□□ 0.37
SYNE3-202ENST00000553340 SCIMPQ6UWF3 145 aa17.39■□□□□ 0.37
SYNE3-202ENST00000553340 NCCRP1Q6ZVX7 275 aaPredicted RBP17.39■□□□□ 0.37
SYNE3-202ENST00000553340 LRRTM3Q86VH5 581 aa17.39■□□□□ 0.37
SYNE3-202ENST00000553340 RALGPS2Q86X27 583 aaPredicted RBP17.39■□□□□ 0.37
SYNE3-202ENST00000553340 OR13C4Q8NGS5 318 aa17.39■□□□□ 0.37
SYNE3-202ENST00000553340 HDAC2Q92769 488 aaKnown RBP17.39■□□□□ 0.37
SYNE3-202ENST00000553340 ISG20Q96AZ6 181 aaKnown RBP17.39■□□□□ 0.37
SYNE3-202ENST00000553340 TADA1Q96BN2 335 aa17.39■□□□□ 0.37
SYNE3-202ENST00000553340 SDCCAG3Q96C92 435 aa17.39■□□□□ 0.37
SYNE3-202ENST00000553340 AURKBQ96GD4 344 aaPredicted RBP17.39■□□□□ 0.37
SYNE3-202ENST00000553340 ZYG11BQ9C0D3 744 aa17.39■□□□□ 0.37
SYNE3-202ENST00000553340 TMEM45AQ9NWC5 275 aa17.39■□□□□ 0.37
SYNE3-202ENST00000553340 TAS2R13Q9NYV9 303 aa17.39■□□□□ 0.37
SYNE3-202ENST00000553340 FAM50BQ9Y247 325 aa17.39■□□□□ 0.37
SYNE3-202ENST00000553340 UBA6A0AVT1 1052 aaPredicted RBP17.38■□□□□ 0.37
SYNE3-202ENST00000553340 LCHNA4D1U4 455 aa17.38■□□□□ 0.37
SYNE3-202ENST00000553340 GRXCR2A6NFK2 248 aa17.38■□□□□ 0.37
SYNE3-202ENST00000553340 ARL5CA6NH57 179 aa17.38■□□□□ 0.37
SYNE3-202ENST00000553340 SOAT2O75908 522 aa17.38■□□□□ 0.37
SYNE3-202ENST00000553340 DDNO94850 711 aaPredicted RBP17.38■□□□□ 0.37
SYNE3-202ENST00000553340 KCNH1O95259 989 aa17.38■□□□□ 0.37
SYNE3-202ENST00000553340 IL12AP29459 219 aa17.38■□□□□ 0.37
SYNE3-202ENST00000553340 CHRNB3Q05901 458 aa17.38■□□□□ 0.37
SYNE3-202ENST00000553340 TSNQ15631 228 aaKnown RBP17.38■□□□□ 0.37
SYNE3-202ENST00000553340 PRR23BQ6ZRT6 265 aa17.38■□□□□ 0.37
SYNE3-202ENST00000553340 GPR142Q7Z601 462 aa17.38■□□□□ 0.37
SYNE3-202ENST00000553340 ZDHHC13Q8IUH4 622 aa17.38■□□□□ 0.37
SYNE3-202ENST00000553340 SPARTQ8N0X7 666 aa17.38■□□□□ 0.37
SYNE3-202ENST00000553340 DPP10Q8N608 796 aa17.38■□□□□ 0.37
SYNE3-202ENST00000553340 PROKR1Q8TCW9 393 aa17.38■□□□□ 0.37
SYNE3-202ENST00000553340 ITPKCQ96DU7 683 aa17.38■□□□□ 0.37
SYNE3-202ENST00000553340 RDH12Q96NR8 316 aa17.38■□□□□ 0.37
SYNE3-202ENST00000553340 CSF3RQ99062 836 aa17.38■□□□□ 0.37
SYNE3-202ENST00000553340 HGH1Q9BTY7 390 aa17.38■□□□□ 0.37
SYNE3-202ENST00000553340 ARMC7Q9H6L4 198 aa17.38■□□□□ 0.37
SYNE3-202ENST00000553340 TRNAU1APQ9NX07 287 aaKnown RBP17.38■□□□□ 0.37
SYNE3-202ENST00000553340 WARS2Q9UGM6 360 aaKnown RBP17.38■□□□□ 0.37
SYNE3-202ENST00000553340 STX16O14662 325 aa17.38■□□□□ 0.37
SYNE3-202ENST00000553340 HPRP00739 348 aa17.38■□□□□ 0.37
SYNE3-202ENST00000553340 FGF1P05230 155 aa17.38■□□□□ 0.37
SYNE3-202ENST00000553340 ANXA6P08133 673 aa17.38■□□□□ 0.37
SYNE3-202ENST00000553340 TCF3P15923 654 aa17.38■□□□□ 0.37
SYNE3-202ENST00000553340 HLA-DPA1P20036 260 aa17.38■□□□□ 0.37
SYNE3-202ENST00000553340 GJA5P36382 358 aa17.38■□□□□ 0.37
SYNE3-202ENST00000553340 TPD52P55327 224 aaPredicted RBP17.38■□□□□ 0.37
SYNE3-202ENST00000553340 POLD3Q15054 466 aaPredicted RBP17.38■□□□□ 0.37
SYNE3-202ENST00000553340 MAPRE1Q15691 268 aaKnown RBP17.38■□□□□ 0.37
SYNE3-202ENST00000553340 RBBP7Q16576 425 aa17.38■□□□□ 0.37
SYNE3-202ENST00000553340 IGFN1Q86VF2 1251 aa17.38■□□□□ 0.37
SYNE3-202ENST00000553340 ZFAND4Q86XD8 727 aa17.38■□□□□ 0.37
SYNE3-202ENST00000553340 PGBD5Q8N414 524 aa17.38■□□□□ 0.37
SYNE3-202ENST00000553340 DTWD1Q8N5C7 304 aa17.38■□□□□ 0.37
SYNE3-202ENST00000553340 FNDC5Q8NAU1 212 aa17.38■□□□□ 0.37
SYNE3-202ENST00000553340 OR2T11Q8NH01 316 aa17.38■□□□□ 0.37
SYNE3-202ENST00000553340 PKMYT1Q99640 499 aa17.38■□□□□ 0.37
SYNE3-202ENST00000553340 NMUR1Q9HB89 426 aa17.38■□□□□ 0.37
SYNE3-202ENST00000553340 TMEM248Q9NWD8 314 aa17.38■□□□□ 0.37
SYNE3-202ENST00000553340 GMNNO75496 209 aa17.37■□□□□ 0.37
SYNE3-202ENST00000553340 B3GAT3O94766 335 aa17.37■□□□□ 0.37
SYNE3-202ENST00000553340 PCNAP12004 261 aa17.37■□□□□ 0.37
SYNE3-202ENST00000553340 GRIK1P39086 918 aa17.37■□□□□ 0.37
SYNE3-202ENST00000553340 MTHFRP42898 656 aa17.37■□□□□ 0.37
SYNE3-202ENST00000553340 C6orf136Q5SQH8 315 aa17.37■□□□□ 0.37
SYNE3-202ENST00000553340 OR10T2Q8NGX3 314 aa17.37■□□□□ 0.37
SYNE3-202ENST00000553340 BRSK1Q8TDC3 778 aa17.37■□□□□ 0.37
SYNE3-202ENST00000553340 SLC22A17Q8WUG5 538 aa17.37■□□□□ 0.37
SYNE3-202ENST00000553340 ZNF347Q96SE7 839 aa17.37■□□□□ 0.37
SYNE3-202ENST00000553340 ACOX2Q99424 681 aa17.37■□□□□ 0.37
SYNE3-202ENST00000553340 SEMA3CQ99985 751 aa17.37■□□□□ 0.37
SYNE3-202ENST00000553340 C1QTNF3Q9BXJ4 246 aa17.37■□□□□ 0.37
SYNE3-202ENST00000553340 TOR3AQ9H497 397 aa17.37■□□□□ 0.37
SYNE3-202ENST00000553340 PRDM5Q9NQX1 630 aaPredicted RBP17.37■□□□□ 0.37
SYNE3-202ENST00000553340 COMMD8Q9NX08 183 aa17.37■□□□□ 0.37
SYNE3-202ENST00000553340 MAGED1Q9Y5V3 778 aaPredicted RBP17.37■□□□□ 0.37
SYNE3-202ENST00000553340 C17orf102A2RUQ5 167 aa17.37■□□□□ 0.37
SYNE3-202ENST00000553340 NCF1BA6NI72 391 aaPredicted RBP17.37■□□□□ 0.37
SYNE3-202ENST00000553340 NCF1CA8MVU1 366 aaPredicted RBP17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms